KEGG   Latimeria chalumnae (coelacanth): 102348198
Entry
102348198         CDS       T02913                                 
Symbol
TNPO3
Name
(RefSeq) transportin 3
  KO
K15436  transportin-3
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03013  Nucleocytoplasmic transport
lcm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102348198 (TNPO3)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102348198 (TNPO3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lcm03016]
    102348198 (TNPO3)
Transfer RNA biogenesis [BR:lcm03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    102348198 (TNPO3)
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1
Other DBs
NCBI-GeneID: 102348198
NCBI-ProteinID: XP_014352792
Ensembl: ENSLACG00000002351
LinkDB
Position
Un
AA seq 924 aa
MMEGEKPNLQLVYRAVQALYHDPDPAGKERASLWLGELQRSVHAWEISDQLLQLRQDVES
SYFAAQTMKMKIQTSFYELPADTHVSLRDSLLSHIQNLKDLSPVIVTQLALAIADLALQM
ASWKGCVQTLVEKYSSDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAYCSGT
VVGLLMDCVGKAGNEEKMLIKAFRCLGSWFNLGVLDSNFMANNQLLLFLFQALQGENTST
NLHEAASDCICSALFAIENVESNLPLAFQLFRGVLTLETAYHMAVAREDLDKVLNYCRIF
TELCETFLEPIVTTPGQGLGELRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDP
VLHSIFRPYIQRLLHALARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDLIFLVGSMEC
FAQLYANLKEGNPPWEATEAVLFIMASIAKSVDPENNPTLTEVLNGVVQLPESVHIAVRY
TSIELVGEMSEVVDRNPQYLDPVLSYLMKGLREKPLASVAAKAIHSICSVCRDHMAHHFQ
GLLDIARSLDSLMLSPEAAVGLLKGTALVLARLPLEKISECLSDLCSVQVMALKKLLSQE
PSNGKSSDPTMFLDRLAVIFRHTNPIVENGQTHPCQKVIQQIWPVLSETLNKHQADNRIV
ERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYQVHQHSCFLYLGSILVDEYGMEEGCRQ
GLLDMLQALCMPTFQLLEQQNGLRNHPDIVDDLFRLSTRFIQRSPVTLLQSVMVVHIIQC
AIAATSLDHRDANCSVMKFLRDLVHTGVANDHEDDFEVRKELIQQVLSQHGQQMVSQLIN
TCCFCLPPYTLPDVAEVIWEIMLFNRPSFCRWLENALKGLPKETSGGAVTVTHKQLTDFH
KQVTSAEECKQVCWALRDFTRLFR
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgatggagggggagaagccgaacctacagctcgtgtaccgggcggtgcaggccctctac
cacgacccggaccccgccggcaaggagcgcgcctccctgtggctgggggagctgcagaga
tcggtacatgcgtgggagatctcagaccagttgttacagctacgtcaggacgtggaatcc
tcttactttgctgcccaaactatgaagatgaagattcagacctcattctatgaacttcct
gcagacacacatgtttcactacgtgactcgttactgtctcatatccagaacctaaaggat
ctctcgcctgtcatcgttacgcagcttgccctggcgatagctgatcttgccttgcagatg
gcctcctggaagggttgtgtgcaaacgcttgtagaaaagtacagcagtgacgtgacgtct
ctgcccttcctgctggaaatcctgacagtgctaccggaggaagtccacagccgatccctc
cgaattggcgccaaccgccgcactgagatcatcgaggacctggcctactgctccggtacg
gtggtgggactgctgatggattgtgttggaaaggcaggcaacgaagagaagatgctaata
aaagccttccgctgcctgggaagctggttcaaccttggtgttcttgacagtaacttcatg
gctaacaaccagctactgctgtttctcttccaggcattgcaaggagagaatacatccacg
aacctgcacgaagcagcatctgactgcatttgttcagcgctcttcgccatcgagaatgtg
gagtcgaacctgccccttgcgtttcaactcttccgcggagtcttaacactggagacggcg
tatcacatggctgtggcacgggaggacctggacaaggtactgaattactgtcgtattttc
acggagctgtgtgaaacgttcctggagccaattgtgacaacgccaggtcaggggctgggg
gagctgcgcactttggaattgctgctgatctgtgcaggccacccgcagtacgaggtggtg
gagatctctttcaatttctggtaccgactcggcgagcacctgtataaaaccaacgacccg
gtactgcacagcatcttccgaccctacatccagagattgctacacgctctggccaggcac
tgtcagctcgaccctgatcacgaaggtattccggaagacacggatgattttggagagttt
cggatgagagtgtcagacctggtgaaggatttgatattccttgtgggatccatggaatgt
tttgcacagctctatgccaacttgaaggaaggaaatcctccctgggaggcaacagaagct
gttcttttcatcatggcctccatagcaaagagtgtagatcctgaaaataatcctacgttg
acggaggtgttgaacggggtggtccaactaccagagagtgttcacattgccgtccgatac
accagcattgagctggttggagagatgagtgaagtggtggacagaaatccacagtattta
gatccagtactgagttacttaatgaagggtctccgagaaaagcccttggcctcggtggcg
gccaaagccatccacagcatctgctcggtgtgccgagatcacatggctcatcacttccaa
ggtctactggacatcgcccgatcccttgactcgctaatgctgtcccccgaggctgctgta
gggctgcttaaaggcactgctctggttctggcacgattgcccctagagaagatctccgag
tgtctaagtgacctgtgttctgtccaggtcatggcactgaagaagctgttgtcccaagaa
cctagtaatgggaaaagctccgatcccacaatgttccttgatcgattagcagtcatattc
aggcacactaaccccatcgtagagaacggccagacacacccatgtcagaaagtaatacag
caaatctggccagtcctgtcggaaacactgaacaagcaccaggcggataacaggatagtg
gagcgatgctgccggtgtctacgctttgctgtgcgctgtgtggggaaagggtccgcggca
ctgctccagccattggtcactcagatggtaaacgtgtaccaagtccaccagcactcctgc
ttcttgtacctgggcagtatcttagtagacgagtatggaatggaagaggggtgtcggcag
ggcctacttgatatgctacaggctctgtgcatgcccaccttccagctgttagagcagcag
aatggccttcgaaatcaccccgacatcgtcgatgaccttttccgcctgtcaaccaggttt
atacaacgtagcccagtgactctgcttcagagtgtaatggtagtccacattatccaatgt
gccatcgcggctaccagcctggatcaccgagatgccaactgcagcgtcatgaagttcctg
cgagatcttgtacacaccggggttgccaatgatcacgaagatgactttgaggtgcggaag
gagttgatacagcaggtattgtcccaacatggacagcagatggtgagtcagctcatcaac
acctgttgcttctgcctgccgccctacaccctgccagacgtggccgaggtcatctgggag
atcatgcttttcaacaggccttccttttgcagatggttggaaaatgcactgaaaggttta
ccaaaggaaacatctggaggggccgtgacagtaacgcataaacaactgacggacttccac
aaacaagttactagtgctgaggaatgtaaacaagtttgctgggcgctgagggatttcacc
aggttgttccgatag

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