Latimeria chalumnae (coelacanth): 102348250
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Entry
102348250 CDS
T02913
Symbol
NPHP3
Name
(RefSeq) nephrocystin 3
KO
K19360
nephrocystin-3
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcm03037
]
102348250 (NPHP3)
Cilium and associated proteins [BR:
lcm03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102348250 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
NPHP3_hel
TPR_12
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_MalT
TPR_2
TPR_16
TPR_19
TPR_11
DUF2225
NPHP3_N
AAA_16
Uso1_p115_C
KAP_NTPase
TPR_6
Pesticin
AAA_19
Motif
Other DBs
NCBI-GeneID:
102348250
NCBI-ProteinID:
XP_014347116
Ensembl:
ENSLACG00000009259
LinkDB
All DBs
Position
Un
AA seq
1257 aa
AA seq
DB search
MGTASSLVSPGEVIEETYGGGGEACEIPVEVKPKARLLRSSFRRGPRVIGTSFKSTASVD
LEYAAEYERLKKEYEIFRVSKNNEIASMQKKEAKLDEENKRLRAELQALQKTYQKILREK
ESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRELEAKLQRLQAQG
IQVFDLAGSDSDDDDGRTDVTTMGTQCEYWSGGVLGSEPSMGSMLQLQQTFRGPEFAHSS
IDVEGPFANVTRDDWDAAVASLLQVTPLFSQSLWSNTVRCYLMSTPETQPEVDIFLKDYV
PKLQRMCEGLGHFFLITHFPVENANDYQLERKWEIEKSSLSILFINSSLPSCLVEDCEEA
FLKNPEAKPLLLYHRAEGGKSSEAVQQLLNRVTEVNKASKAKIIDHSGDWEEGAHKAFSQ
LDKIIKQELLGCESIELENKDSGIDEESSPSEAEDFGDVLWDMHDEQEQVEAFQQASKSL
CELGFEKYYERLNDLVAAPAPIPPLLVSGGPGSGKSLLLAKWIELQQKRSPNTLILYHFV
GRPLSTSSEPALIIKRLTLKHAERHMKWLIDPLPVNVRVIVSVNVETCPEAWRLWPTLHL
DPLSPKDVKALINAECRCRDTKLTKEQERRLERHCRSATTCNALYVTLLAKMVTWTRNAG
DIDEILKQCFQCQDTVALYRLVLRTVQDSVPSERDRIIMREILCQVYVSHNGVSESELME
LHPELSWPVLASLLHRLYSMCVLSYGCGLLQFLHLQAWEAVRLEYIEKGQHNASAYREKL
IKYFTQQLSQDRVTWRSADELPWLFLQQGDKVKLHRCLLNLFVSQNLYKRGHFAELLGYW
QLVGMDKSSMAAEYFDSLKQYEKCCEEDSMTGLADLYETLGRFLKDLGLLSQAVAPLQRS
LEIRETALDPDHPSVAQSLHQLAGVYVQWKKFGNAEQLYKQALEISENAYGTEHLTVARE
LDALAMLYQKQNKYEQAEQLRKRALKIRQKIARQKGSMYTLLRRRVLQLEELTLGNNTPE
SARTLNELGVLYYLQNNLETAEMFLKRSLEMRERVLGPEHPDCAQSLNNLAALYSEKKEH
ELAEELYERALDIRRRALAPDHPSLAYTVKHLAMLYKKRGKLEKALPLYELAVEIRQKSF
GSKHPSVATALVNLAVLFSQLKKHSEALPLYERALKIYEDSFGRTHPRVGETLKNLAVLS
YEEGDFEKAAELYKRAMEIREAEASLVGGKAPSRHSSSGDSLRKTLQPHALLELGHR
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcctcatccctggtcagcccaggagaggtgattgaagagacgtatggagga
gggggtgaggcttgcgagatcccggtggaggtgaagcccaaggcccgcctccttcgcagc
tccttccgccggggcccgcgtgtgattggaaccagttttaaatccactgcctctgtggac
ctcgagtacgctgccgagtatgagcggttgaagaaggagtacgagatcttccgtgtcagt
aaaaacaatgagattgcctccatgcagaagaaggaagccaaacttgatgaggagaataag
agactgagggcagagctgcaggcacttcagaaaacgtatcagaagatactccgagagaaa
gagagcgctttagaagctaaataccaggcaatggagagagctgctacgtttgagcatgac
cgggacaaagtcaaacgccagttcaaaatctttagagagaccaaggaaaaggagattcag
gacctgctgcgggcgaagcgggagctggaggccaaactgcagaggctgcaggctcagggg
atccaggtgtttgacctggcaggctcggactcggatgacgacgacggccgcactgatgtc
accactatgggcactcagtgtgagtactggagcggtggagtgctggggagcgagccttcc
atgggcagcatgttacagcttcagcagactttcagagggcctgagtttgcgcacagctct
attgatgtggagggaccttttgccaatgtcaccagagatgactgggacgctgctgttgct
agtttgcttcaggtgactccgcttttttcccaatccctctggagtaacacggtgcgctgt
tacctcatgagcacgcccgaaacgcaacccgaagtggatatcttcctcaaagactatgtg
ccaaagcttcaaagaatgtgtgagggactcggccacttcttcctgataactcattttcca
gtagagaatgcaaatgactatcagctggagcgaaaatgggaaattgaaaaaagctctcta
tccattttgtttataaattccagtttacctagctgtttggtagaggactgtgaggaagcg
ttcctgaagaacccagaagccaagcctctgcttctttaccacagagctgaaggtgggaaa
agctcagaggctgtgcagcagctactgaacagagttactgaggtgaacaaagcgagtaaa
gcaaagatcattgaccacagtggagactgggaggaaggagcacacaaagccttcagtcag
ctggacaagataattaagcaggagctgttgggctgtgaaagcatagagcttgaaaataaa
gattcggggattgatgaggaatcgagcccttcggaggcagaagattttggagatgtgctg
tgggatatgcatgatgagcaggagcaggtggaggcttttcaacaagcttcgaaatccctg
tgtgaattggggtttgagaagtattacgagcggctcaatgatctggtggcagctccagca
ccaattcctccccttctggtatcaggcggacctggctctggcaaatctctccttttagca
aagtggattgaacttcagcagaagcgttcaccgaacacattaatcttgtatcattttgtg
ggaaggcccttgtctactagttcagagccggcgctgataatcaagcgattaactttaaag
catgctgaaaggcatatgaaatggttgattgacccgctgcctgtgaacgtcagggtgatt
gtgtcggtgaatgtggaaacctgtcccgaagcttggaggctgtggccaacattacatctc
gacccgctgagtccgaaggatgtgaaggctcttattaatgctgaatgcaggtgcagagac
actaagttaactaaagagcaggagaggaggttagaaagacattgccgctctgccactaca
tgcaatgccctgtatgtaaccctgctggctaaaatggttacctggaccagaaatgcagga
gatattgatgaaattctgaagcagtgtttccagtgccaagatacagttgcactgtacaga
ctggttctccgaactgtacaggactctgtgcctagtgagagagacaggatcataatgagg
gagattttatgccaggtgtatgtaagtcacaatggggtgagcgaatcggaactgatggag
ctccatccagagctttcctggcctgtgctggcctcccttcttcaccgcctctacagtatg
tgcgtgctgtcctatggctgtgggttgctccagtttctgcacctccaggcctgggaagca
gtaagactggaatacatagagaaaggacaacataatgcttcagcatatagggaaaaacta
ataaaatacttcactcagcaactgagtcaggaccgagtgacctggaggagtgcggacgag
ctcccttggcttttcctgcagcaaggggacaaggtcaaactgcacaggtgtctactgaac
ctctttgtctcccagaacctttacaagagagggcattttgctgaattgctgggctactgg
cagctcgttggcatggacaagagctccatggctgcagagtattttgactctttaaagcag
tacgaaaaatgctgtgaagaagacagcatgactggcttggctgacctctatgaaacgcta
ggacgcttcctgaaggacctgggacttcttagtcaggctgttgcccccttgcagcgatcc
ctggaaattcgagagaccgcactcgacccagaccacccgagtgtggctcagtccctccac
cagctggctggtgtctacgtccagtggaagaagtttggcaacgctgagcagctgtacaag
caggcgctagagatcagtgaaaacgcttatgggacggagcatttgacagtggctcgagaa
ctggatgcacttgctatgctttatcagaagcaaaacaagtatgaacaggctgaacagctg
aggaagagagcgttgaagatacggcagaaaattgctcgccagaaagggagtatgtacacg
ctgcttcgtcgtcgagtgctgcagctggaggaactgacactgggcaacaacacacctgag
agtgcacggacactaaacgagctaggtgttctctactacctgcagaacaacctggagact
gcggagatgtttctgaagcgctctttggaaatgagggagcgtgtgctgggccctgagcac
ccggactgtgcgcagtcgctgaataacctggctgctctctacagcgagaagaaggagcac
gagctggcagaagagctgtacgagagagctctggacataaggagaagagccctggctccc
gaccacccgtccctggcctacactgtcaaacacctcgcgatgctctacaagaagagggga
aagctggagaaagctttacctctgtacgaactggcggttgagattcggcagaagtccttt
ggctcgaagcaccccagcgtagccactgccctggtgaacctggcggtgctgttctcacag
ctgaaaaaacacagtgaagctttaccgctgtacgagcgtgctttaaagatttacgaggat
agcttcgggcgtacccatccacgagtgggagaaacgctgaagaacttagcggtgctgagc
tacgaagagggggattttgaaaaggctgccgagctgtacaagcgagccatggaaatcagg
gaagctgaagcttccctcgtgggcggaaaggctccctccaggcactcctccagcggcgac
agcttgagaaagacgctgcagccgcatgctcttctggagctcgggcacaggtga
DBGET
integrated database retrieval system
