Latimeria chalumnae (coelacanth): 102348320
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Entry
102348320 CDS
T02913
Symbol
CASC3
Name
(RefSeq) cancer susceptibility candidate 3
KO
K14323
protein CASC3
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03013
Nucleocytoplasmic transport
lcm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102348320 (CASC3)
03015 mRNA surveillance pathway
102348320 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102348320 (CASC3)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102348320 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
102348320
NCBI-ProteinID:
XP_014342735
LinkDB
All DBs
Position
Un
AA seq
749 aa
AA seq
DB search
MADRRRRRKRASQDSEEDEESGSGAESPKSAVELAASRARSGSGGGGEEVGGGGNGNGNS
NGNSNSASTSTTTTTTTTTTTGGGEGGVRRDDTAGGCSEEDESECESEDGIGEAVLSDYE
SADENGSQVSEGDDEEGEYSDEEGSKEKTKQTSEGLEVNEPSVKEEGEKSEQKGTVAGER
QSGDGQESTESVENKAGKKTQKHLDDDEDRKNPAYIPRKGFFFEHDLRGQTQEEEVSRPK
GGRQRKLWKDEGRWEHDRFREDEQAPKSREELIALYGYDIRSNNNPDEIQSRRIRKPRFG
SPSRREKRWQDEKPNRPPRHQGTNAPPPRTFVNKNSTGSGRTSQSRNFPRTGGYKETRMT
YKSLELNSSYTNRTGIENLRAENELRFKKTEQNPMRDPSPIAENRLDRHSPVKREEAVLE
NQTSSTTDIVLPVQDRPIEKKSYSRARRSRNKVTEVGKQLSTDEPPPAEPLAPVPEKPVQ
VVSPPPTVKSGSWETPVEPTVSGIEHEMAQMNLTEQTWTPGQPQFIQPRELRGIPNQMHM
GGATPQYNRIEDMGVQAGRAKRYSSQRQRPVPEPAPMHIGIMEGHYYDPLQFQGPIYTHS
ESPTPLPPQSMIVQPEMHLTHPGLHPHQSPAPLTNPGLYASPVSMSPGQPPPPPPPQQLL
PPPTYFSPPGVMNFGSPGYPYAPGAIAPHLYPNAQAQSQVYGGVTYYNTVQQQVQPKPSP
PRRTSQPVTIKPPPPEDNKIEKSKEKNSA
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagacggcgacgacggaagcgcgcgtctcaggatagcgaggaggacgaggag
tccggctccggggccgagagccctaagtccgccgtggagttggctgccagccgggctcgg
agcggtagtggtggaggaggagaagaagtcggcggcggcggcaatggcaacggtaacagt
aacggtaacagcaacagcgccagcaccagcaccaccaccaccactactactactactact
accggcggcggggaaggaggtgtccggagagacgacactgcgggcggctgcagtgaagag
gacgagtccgagtgtgaaagtgaagacggcataggagaagccgtactctcggattatgaa
agcgctgatgaaaatggttcccaggtctcagagggagatgacgaggaaggggaatacagt
gatgaagagggctcaaaggagaaaacgaaacagactagtgaaggactggaggtgaatgag
ccttcagtgaaggaggagggggaaaaatctgaacaaaagggaacagtagctggggagaga
caaagtggagatggccaggaaagtactgagtctgttgagaataaagctggtaaaaagact
cagaagcatctggatgatgatgaggaccggaagaaccctgcctacatcccacgtaaaggg
ttcttctttgaacatgacctccgaggacaaacacaagaggaagaagttagcaggccgaag
gggggacggcagcggaagctgtggaaggatgaagggcgatgggagcatgatagattccga
gaagatgagcaggctccgaagtctcgtgaggaactgattgcattatatggttatgacatc
cgttcaaataacaatccagatgaaattcagtcacggagaatacgaaaaccaaggtttgga
agcccctcaaggcgagagaagaggtggcaggatgagaagccaaataggccacctagacac
cagggtacaaatgcaccaccaccacggacatttgtcaacaagaattctacaggatccgga
agaacgtcgcagtctagaaactttccaaggacagggggctacaaagagactcgcatgacc
tacaaatccttggaactgaatagttcttatactaacagaactggtatagagaatcttaga
gctgaaaatgagctgaggtttaaaaagactgagcaaaatcctatgagagatccctctccc
attgccgagaacagactagacagacacagtccagtcaaaagggaggaggctgtcttggaa
aaccaaacctcatcaacaacagacattgtgctgccggtgcaggacaggcccatagaaaag
aaatcttattcccgagccaggaggagcaggaacaaagtcacagaggttgggaaacagctc
tccacagatgaacctcccccagcagagccgctggctcctgtacctgaaaaaccagtgcag
gtggtgtcacccccacccacagtaaaatccggctcttgggagacgccggtggagcccacc
gtcagtgggattgagcatgagatggcccagatgaacttgactgaacagacttggacccca
ggccagcctcagttcatacagccacgagaactcaggggtattcctaatcagatgcacatg
ggaggagcaacaccccagtataacaggatagaagacatgggtgtccaagcaggccgggca
aagcgttattcttcacagcgacagagaccagtcccagaacctgcacccatgcacatcggc
attatggaaggacattactatgacccattacaattccaaggaccaatctacacccatagt
gagagtcccactcctttaccgcctcagagcatgattgtacagccagaaatgcacctcacc
cacccaggtttacacccacatcagtcaccggctcccttgactaacccaggcttatacgcc
tccccagtctccatgtcgcctggacagccgccaccgccgccacctccacaacagctgctg
cctccccccacttacttctcccctccaggagtaatgaactttggaagtccgggctaccca
tatgcaccaggagcaattgcaccccacttgtaccccaatgctcaggcgcagtctcaagtt
tatggtggcgttacttactacaatactgtacagcagcaagtacagcccaaaccatctcct
ccacgaagaacgtctcagcctgtgacaattaaaccccctccacctgaggacaacaaaatt
gaaaaatctaaagagaagaacagtgcatag
DBGET
integrated database retrieval system
