Latimeria chalumnae (coelacanth): 102348418
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Entry
102348418 CDS
T02913
Symbol
CHRNE
Name
(RefSeq) cholinergic receptor nicotinic epsilon subunit
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102348418 (CHRNE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102348418 (CHRNE)
Ion channels [BR:
lcm04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
102348418 (CHRNE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
102348418
NCBI-ProteinID:
XP_014346135
Ensembl:
ENSLACG00000002691
LinkDB
All DBs
Position
Un
AA seq
507 aa
AA seq
DB search
MKLTFSLLLLFLFKAVCGNLETKLIEGLFAGYDKSTRPAENVDDIVDVMLKLTLTNLISL
NEKEETLTTNVWIEIQWHDYRLTWNTTEFPIFVIRVPYYVLWLPNIVLENNIDGNFDIAY
YANVLVYPDGSIYWLPPAIYRSTCSITITFFPFDWQNCSLVFRSQSYSASEIRLLLAVEN
STEIEWVDIDPSDFTENGEWAIKHKPARKVINKQFTPDDLEYQEIQFYLIIQRKPLFYII
NIIIPCVLISSLVVLVYFLPAQAGGQKCTVSISVLLAQTVFLFLIAQKVPETSLSVPLIG
KYIIFVMFVSTLIVTNCVIVLNISLRSPSTHIMPPKVKHIFLEVLPQYLGMHLEPSEDSW
DVPRPRRRSSFGIMLKAEEYILKKPRSELMFERQKDRHGLKLSHYNKLDGIDVGTTANLY
KSLAHLAPEIKECVDACNFIAKNTKENNDSGPEIESWVLIGKVIDKVCFWVAILLFSIGS
VGIFMMGKLNEVPEYPFPGEIKKYTPE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccttctctttactactcctctttctcttcaaagcggtttgcggtaatttg
gaaaccaaactcatcgaaggattattcgccggctatgacaagagcacacggccagcagag
aacgtggatgacatcgtggatgtcatgttgaaattaaccctaaccaaccttatttcactg
aatgagaaagaagaaactttaacaaccaatgtctggatcgaaattcaatggcacgattat
cgtctgacctggaatacaacagaattcccgatctttgtgatccgagttccatattatgtt
ctttggctaccaaatattgtacttgaaaacaacatcgatgggaactttgacattgcctat
tacgccaacgttttggtttaccccgacgggtcgatctactggctcccgcctgccatctac
aggagtacctgctccatcaccatcaccttcttcccctttgattggcagaactgctccttg
gttttcaggtcccagtcatacagtgcaagcgagatcagacttttgctggccgtggaaaat
agtacagagattgagtgggtggacatagatccatcggactttacagaaaatggggagtgg
gcgattaagcacaagccagcaaggaaagtgatcaacaagcagttcacccccgacgacctg
gaataccaggagattcaattctacctcatcattcaaaggaaaccccttttctacatcatc
aacatcatcatcccctgtgtgcttatctcctccctggtggttctggtctacttcctccct
gcccaagccggcggtcagaaatgcacagtgtccatctccgtcctcctggctcagactgtc
ttcctcttcctcatcgcgcagaaagttccggaaacttccctcagcgttccgctcatcggc
aaatacataattttcgtgatgtttgtgtccaccctcatcgtgacaaactgcgtgatcgtg
ttgaacatttccctgcgaagccccagcacccacatcatgccgccaaaagtcaaacacatc
tttttggaagtgctcccccagtacctcggtatgcacttggagccctcggaagactcctgg
gatgttcccaggccgaggagacggagctcgttcggaattatgctcaaagctgaggagtac
atcctcaagaaaccccggagcgagctgatgtttgaacggcagaaggaccggcatggactg
aagttatcacactacaacaagctggatggaatcgatgttggcaccaccgccaacctatac
aagagcctggcccacttagcccctgagattaaggagtgtgtggatgcctgtaatttcatt
gcaaagaacacaaaggagaacaacgactccggacctgaaatagagagctgggtgctgatt
ggcaaagtcatcgacaaggtgtgcttctgggttgcaatcctgctcttttccatcggctcc
gtgggaatattcatgatggggaaactcaatgaggtgccagaataccccttccccggagaa
attaagaaatacaccccggagtag
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