Latimeria chalumnae (coelacanth): 102348469
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Entry
102348469 CDS
T02913
Symbol
SSRP1
Name
(RefSeq) structure specific recognition protein 1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102348469 (SSRP1)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102348469 (SSRP1)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
102348469 (SSRP1)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
102348469 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
HMG_box
Rttp106-like_middle
POB3_N
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
102348469
NCBI-ProteinID:
XP_014353403
LinkDB
All DBs
Position
Un
AA seq
591 aa
AA seq
DB search
MTDTLEYNEIYQEVKGCMIDGRLRLNRQMLSYKSNKTGKVDTIQATDLTEGYWRRVALGY
GMKLHTKNGHIYKYDGFRESDYDKLSDFFKSNYRVDLTEKDFCVKGWNWGTVRFGGKHGK
TFDYKIPYTTVLRLFVLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDDDIALSLN
MSEEELEKKFQGKLTKNMSGCLYEMVSRIMKALVNRKITVPGNFQGHSGAHCITCSYKAS
SGLLYPLERGFIYVHKPPVHIRFDEISCVNFARGTTTTRSFDFEIETKQGTQYTFSSIER
HGSQLFFNPFLPSVQQGIKQSYDDYADSDEDPHDAYLERMKEEGKIREEAANDSSEDSGE
ETDESFNPGQEEEDVAEEFDSNASASASSDEEGSEEEEKKRPAKKPKLVKERKPHKKAEG
KKAKDPQAPKRPMSAYMLWLNANREKIKSDNPGISITDLSKKAGELWKGMTKDKKEEWDR
KAEIAKKDYEKAMKEYKESGGADAFKKESAKKSKGKAEKKPAPKAPPVKVGNESFKSKEF
VSSEDSSSEERDSGKSKKRKEKKVKKEKESEEEEEEEILSTPASGSDSDSD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacactggaatataatgagatctatcaggaggtgaagggctgcatgattgat
ggacgactacgtctcaatcgccagatgctgtcctacaaaagcaacaaaacggggaaagtg
gacaccatccaggctacggacctgacagagggctactggcgacgcgtggccctgggctac
ggcatgaagctgcacaccaagaacggccatatctataaatatgatggcttccgggagtcg
gactatgataagttgtcggactttttcaaatctaactatcgggttgatctgacagaaaag
gacttctgtgtgaaaggatggaactggggcactgtgagatttgggggtaagcacgggaaa
acctttgactacaagatcccctacaccactgtgctccgactctttgtcctgccccacaag
gatcagaggcagatgttctttgtgatcagtttagaccctcctatcaaacagggccagaca
cggtaccatttcctcatcctgctcttctcaaaagacgacgacatcgccctctccctgaac
atgagcgaggaggaactggagaagaagtttcaggggaagctgaccaagaacatgtctggc
tgcctctatgagatggtcagccgcatcatgaaggcactggtgaaccgcaaaatcactgtc
cccggaaacttccagggccactcgggggcccactgcatcacctgctcttataaggccagc
tcaggactgctgtaccccctggagcgaggcttcatctacgtgcacaagccgcctgtccac
atacgcttcgacgagatctcctgcgtcaacttcgcccgtggcaccaccaccacccgctcc
ttcgacttcgagatagagacgaagcagggtacacagtacaccttcagcagcatcgagcgg
catggatctcaacttttttttaatcctttcctgccctctgtacagcagggcattaagcag
agttacgatgattatgcggattcagacgaagacccacacgacgcatacctggagaggatg
aaggaggaggggaagatccgtgaggaggcagccaacgacagcagcgaggattcaggagag
gagaccgacgagtccttcaaccccggacaagaagaggaggatgtggctgaggagtttgac
agcaatgcgtcagcaagcgcctcgagcgatgaagagggcagcgaggaagaggagaaaaaa
cggccggccaagaaacccaaactggtgaaggagaggaaaccccacaaaaaggcggaggga
aagaaggccaaagaccctcaagctccaaagaggccgatgtcggcctacatgctgtggttg
aatgcaaaccgggagaagatcaagtcggacaaccccggaatcagcatcactgacctgtcc
aagaaggccggagagctctggaaaggaatgaccaaggacaagaaggaggagtgggaccgg
aaagctgaaatcgctaagaaggactacgaaaaagccatgaaagaatataaggagagcgga
ggagcggacgccttcaaaaaggagtcggcgaagaagagcaaggggaaggcggagaagaaa
ccggcacccaaggcgcctccagtgaaagtggggaatgagagcttcaagagtaaagagttt
gtgtcgagtgaagacagttcttcagaagaacgggacagcgggaagagcaagaagagaaaa
gagaagaaagtcaagaaagaaaaggagtcggaggaagaggaggaagaggagattctcagc
acaccagcaagcggctctgattcggattctgattaa
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