Latimeria chalumnae (coelacanth): 102348482
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Entry
102348482 CDS
T02913
Symbol
ITGB1
Name
(RefSeq) integrin subunit beta 1
KO
K05719
integrin beta 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03271
Virion - Rotavirus
lcm04145
Phagosome
lcm04510
Focal adhesion
lcm04512
ECM-receptor interaction
lcm04514
Cell adhesion molecules
lcm04530
Tight junction
lcm04810
Regulation of actin cytoskeleton
lcm04820
Cytoskeleton in muscle cells
lcm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
102348482 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102348482 (ITGB1)
04514 Cell adhesion molecules
102348482 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102348482 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102348482 (ITGB1)
04530 Tight junction
102348482 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102348482 (ITGB1)
04810 Regulation of actin cytoskeleton
102348482 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102348482 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102348482 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102348482 (ITGB1)
04515 Cell adhesion molecules [BR:
lcm04515
]
102348482 (ITGB1)
04090 CD molecules [BR:
lcm04090
]
102348482 (ITGB1)
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
102348482 (ITGB1)
Exosome [BR:
lcm04147
]
Exosomal proteins
Proteins found in most exosomes
102348482 (ITGB1)
Cell adhesion molecules [BR:
lcm04515
]
Integrins
Integrin beta subunits
102348482 (ITGB1)
CD molecules [BR:
lcm04090
]
Proteins
102348482 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
102348482
NCBI-ProteinID:
XP_006012862
Ensembl:
ENSLACG00000001067
LinkDB
All DBs
Position
Un
AA seq
802 aa
AA seq
DB search
MDCRLHFLIAFCLMCHVFAQQDGSECLKANAKSCGECIQAGPSCGWCTKLDFLQQGEPTS
ARCDDLAALKTKGCPESQIENPRGSKNITNNKEVTNRVGNTQKPKPEDITQIQPQRLELH
LRSGEPQTFELKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMVEMRKITSDFRI
GFGSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLNLTSNGNLFNELVGKQRIS
GNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCH
LENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTQEFEPVYKELQNLIPKSAVGTLSS
NSSNVIQLIIDAYNSLSSEVILENSKLPEGVTISYKSYCKNGINGTGENGRKCSNISIGD
EVKFDVSITAQKCPKNGHEEVIKLKPLGFTEEVEIVLKFICECDCHNEGIPNSDECNYGN
GTFECGACRCNEGRIGRLCECSTDEVNSEDMDASCRKDNSSEICSNNGDCICGECVCKKR
ENPNEVYSGKYCECDNFNCDRSNGLICGGNGVCKCRKCECYENFTGSACDCSMDTKPCES
MYRQICNGRGECICGRCKCSDKFQGPTCEMCPTCPGVCAEHKECVQCRAFNKGEKKDVCN
EACGKAFKLVIVEDRLQLPQPGQLEALTHCKEKDVDDCWFYFTYAVNNTNNDYVVHVVKK
PDCPAGPEIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN
PIYKSPINNFKNPSYGRKAASL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggattgtcgacttcactttctaatcgctttttgtttaatgtgccatgttttcgcccag
caagatggaagtgaatgcctaaaagccaatgccaagtcatgtggtgaatgtatacaggca
ggtcccagctgtggatggtgtacaaaactggatttcttacaacaaggagaaccaacatca
gcacgatgtgatgacttagcagcattaaagactaagggctgccctgaaagccaaattgaa
aatcccagaggtagtaaaaacatcaccaataataaggaagttaccaaccgtgttggaaat
acacagaagcccaaaccagaagatattacgcaaattcagccacaacgattggaactgcac
ctacgatcgggagaaccacagacatttgagctgaaatttaaaagagctgaggattaccca
attgatctttattaccttatggatctttcctattccatgaaggatgacttggagaatgtg
aaaagtctgggaacggctttgatggttgaaatgaggaagattacctcagattttagaatt
ggctttggttcttttgttgagaaaacggtcatgccttatatcagtactaccccagcaaag
ctcctgaacccttgtacgagtgaccagaattgtaccagccctttcagctacaagaatgtc
ctcaatcttacgagtaatggaaatcttttcaacgaacttgtgggtaaacaacgcatttct
ggcaacctggattctcctgaaggcggttttgatgccattatgcaggttgcagtctgtggg
gaacaaattggttggagaaatgttactcgtctgttggtgttctccactgatgcaggattc
cactttgccggagatggaaaacttggtggaattgttttgccaaatgatggaaagtgtcac
ctggaaaacaacatgtatacaatgagtcattactatgattatccttccattgcacacctg
gtacagaaacttagtgacaacaacattcagacaatttttgccgttacacaggagtttgaa
ccagtttacaaggaactgcaaaaccttattccaaagtcggcagttggaaccctgtcctct
aattctagcaatgtgatccaactgattatcgatgcgtacaattctctgtcctcagaagtc
attttggagaacagcaaacttcctgaaggtgtgacaataagttataagtcttactgtaag
aatggtattaatggaacaggagaaaatggaagaaaatgctccaacatttcaattggtgat
gaggtaaaatttgatgttagcatcacagctcagaagtgtccaaagaatggccatgaagaa
gtgattaaacttaagccacttggttttactgaagaagtggaaatagtcctcaaatttatt
tgtgaatgtgattgtcacaatgagggaatcccaaatagtgatgaatgcaactatggcaat
ggaacatttgagtgtggtgcctgcagatgcaacgaaggacgtattggaaggctctgcgaa
tgtagtacagatgaagtgaacagtgaagacatggatgcttcctgcagaaaagacaacagc
tctgaaatctgtagtaacaatggagactgcatctgtggagagtgtgtgtgtaagaaaagg
gaaaaccccaatgaggtctactctggcaaatattgtgaatgtgacaatttcaactgtgat
agatctaatggattgatatgtggaggaaatggcgtatgcaagtgtagaaaatgtgaatgt
tatgaaaacttcactggtagtgcctgtgactgctcaatggacaccaaaccatgcgagtca
atgtataggcagatctgtaacggcagaggagaatgtatatgtggccgctgtaaatgctct
gataaattccagggacctacttgtgagatgtgtccaacttgccctggagtgtgtgctgaa
cacaaagagtgtgtgcaatgcagagcctttaacaaaggtgaaaagaaagatgtttgtaat
gaagcatgtggtaaagcattcaagctggtgatagttgaggaccgattacagttaccacag
cccggccaattagaagcacttactcattgtaaagagaaagatgtagatgactgctggttc
tacttcacatatgctgttaataatacaaacaatgactatgtcgtccatgtagtaaaaaaa
ccagactgtcctgctggaccagaaattattcccatagtggctggtgtggttgctggaatt
gtcctaattggcctagctttactgcttatatggaagctgcttatgattatccatgacaga
agagagtttgcaaaatttgaaaaggaaaagatgaatgccaaatgggatacgcaagaaaac
ccaatttacaagagtcctattaataatttcaagaatccaagttatggacgtaaagctgct
tctctctaa
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integrated database retrieval system
