Latimeria chalumnae (coelacanth): 102348746 Help Entry 102348746         CDS       T02913                                  Symbol PALB2 Name (RefSeq) partner and localizer of BRCA2   KO K10897   partner and localizer of BRCA2 Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm03440   Homologous recombination lcm03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:lcm00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     102348746 (PALB2)    03460 Fanconi anemia pathway     102348746 (PALB2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:lcm03400]     102348746 (PALB2) DNA repair and recombination proteins [BR:lcm03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA complex      102348746 (PALB2)    FA (Fanconi anemia) pathway     Downstream FA components      102348746 (PALB2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PALB2_WD40 Beta-prop_WDR19_1st Motif Other DBs NCBI-GeneID:  102348746 NCBI-ProteinID:  XP_005998537 LinkDB All DBs Position Un AA seq 1388 aa AA seqDB search METYTSKTLTLEEREKVKERLALLKKEHSRTVNKLQRSQRAERVRQHVRKTVAEQNRMLH MDHTEQSVSGAVDKILPSLDSDEEVPTWDTRINHSQVEGEKKMTVSFNLEPEVINVVNTP NGSPSVASLNESLGDNLSAILGQCQETKKEPAIKSKMKLKRNKWRWEEKELVCERFGTSV IENCCFEKKIGERHFDEGQPVSPVFKKNIDQAHNENSEQEPVGLCTVLYDENELDRSHQG KEKVVRLDHPVDENTEEFILPTEELCLQTLSMDPSTSSPQFESQTTNNGCIRFDVPLHIS ERSDETVEPPNNPEKNNSLTNEEIKSGINENTSMEEDTVHALIDTGLNDTVLQVQTGKSP SKATDSFNKMCAKSKLDHNKETSSSTSDIIKNGVRDAPVEIKSDQIIAYSTIQEKPSSVQ SESPLSSCTLIEGLLFPVEYYVRTTRRMSMCQRKVDLDAVIHSYLGKTRGRRRKLMSDLN RLDQEVSKNDTEFKKINGVGNQQFCPSIVSEQNCSESSGTVFGSRSPGSGLVTSHGANAD RVQFRRRERGRPRRLGVTCTDFERVISVGEKEGAGSSAKVIQQHTHLANDSLSEKENDGG KNKTVVERKRPAFEQTIEDGSSSGNVAASAFEISREVLKEPKRRLQHTACPVENSMSKLL ELSNEALAQQLENLEKTVKQAKENVESKEIQIPHIESKAEHVLNIHKVVETFSPHPETVL PSVKRRRGRPPKSKKHLQTMMGLASLQNAHLKMKEVHSNPLFPVPEERFSIRKLSSSLDI IDFHLPDEEFGLLKLEKLKVCAVTQVESFTPLPPETSHTVTKIASKDSVLEGRYLGESTV EKSNQDSEFQFFHPPSSWAFVADEHSVTCELPQQKKLCASTLVITPECTVQTEANSPPAV SSGSAPFPSLSLTPVVSSPKSSGSGVLPVFRPPSQIAKTLAVPGPSDSVKDEKTHDSLLL TATPDLDGWLNESCWSAEKKKKHALLPGKFLDNSREPEIADQLVNSGLFRNCTLPCTGSQ EMVIVKLDDKYGQENINSPTCQGHSDTNEETLKLISTLKNHSHSCGVDLCSVWWDIDGRR RLNIVIACENSVSLWESLQENQWENTHTWDFTEVPVIQIVSIPEAINLICVALGKLEIGE IRTLFYSREEGTFRQSLLRSGDMKIVLGLTDRRVVSCNSGYRKQNVELISLSEEGRNEGT LTLMSPGESILAFAEVDGEKDALIATTDLYNIVLWNIKTGQLLQSISIGNSYPTSLCLKA FSDSGLLFAILCNQHNNKSESSLDSVLKLVAINPKKGHNSQVLAYTLPAGFRGQYLDGDV SGQTVAAVLTSGAIVLWDLLYGHCTAQLAPETDESWSLVRWANLDSCLLAGQKDGHVLIY EYLGTWRK NT seq 4167 nt NT seq  +upstreamnt  +downstreamnt atggaaacttacactagcaaaaccttaactttagaggaaagagaaaaggtaaaagaaaga ctcgccctgttaaaaaaagaacacagcagaactgttaataaattacagcgttcacaaaga gcagaacgagtaagacaacatgtcaggaaaacggttgcagagcaaaatcgtatgcttcac atggatcatacagagcagtctgtgtcgggtgctgtggataaaatcttgccttcattggac agtgatgaggaagtacctacatgggacacaaggattaatcattcacaggtggaaggagag aaaaagatgactgttagctttaaccttgagccagaggtcattaatgtagtgaacactcca aatggaagtccgtctgtggcaagcctgaatgaaagcctgggggacaatctttcagcaatc cttggtcaatgccaagaaaccaaaaaggaaccagcaataaaaagtaaaatgaaattaaag aggaacaagtggaggtgggaggagaaggaacttgtgtgtgaaagatttggtacatcagta attgaaaattgttgttttgagaaaaaaataggagagagacactttgatgagggacaacca gtatcgcctgtctttaagaaaaacattgaccaagcacacaatgagaacagtgaacaagag cctgtgggattgtgtacagtactgtatgatgaaaatgaacttgatcgttcacatcaagga aaagagaaagttgtaagattggatcatcctgttgatgaaaatacagaagaatttatcctt ccaactgaggaactttgtttacagacgttatcaatggatcctagcactagcagtccacaa tttgaatcccagacaactaataatggctgtattaggtttgatgtaccattacatatatct gaacgtagtgatgaaactgttgaaccaccaaataatcctgaaaaaaataattctttaact aatgaagaaattaagagtggaattaatgagaatacaagtatggaggaggatactgtccat gcactaatagatactggtctgaatgatacagttttgcaagtccaaactggtaagagtcca agtaaagcaacagacagttttaataagatgtgtgccaaatccaaattagatcacaataag gaaacaagttcttctacctctgacatcataaagaatggtgtaagagatgcacctgttgaa ataaaaagtgaccagattattgcatattctacaatacaagagaaaccctccagtgttcaa tcagaatctcctttgagctcctgtacattgattgaaggacttctgtttccagtagaatac tatgttaggacaactcgacgtatgtccatgtgtcagaggaaggtggacttggatgcagtg attcatagttatttgggcaaaactagagggaggcgcagaaagctgatgtctgatctaaac agattagaccaagaagtatccaaaaatgatacagaatttaagaaaattaatggggtggga aaccagcagttttgtcccagtattgtttcagagcaaaactgctctgagtctagtggaact gtgtttggttctaggtcgccaggcagtggcctggttactagccatggtgcaaatgcggac agagtccaattcagaaggagggaaagaggacggccaaggaggttaggtgtaacttgtaca gattttgaacgggtcatttctgtaggagaaaaggaaggtgctggcagctctgctaaagta atacagcaacatacccacctggcaaacgattccttgagtgaaaaagaaaatgacggaggc aagaacaaaactgtggttgaaaggaaaaggcctgcatttgagcaaaccatagaagacggc agcagttcaggtaatgttgctgcctctgcttttgaaatctctagagaagttttaaaagaa cccaaacgcagattgcagcatactgcatgtccagttgaaaatagtatgagcaagttattg gaactcagcaatgaagcacttgcccagcagttggaaaacttggaaaaaacggtaaaacaa gcaaaagaaaacgtagaaagtaaagagattcaaattccacatattgaatctaaagctgaa catgtgttaaacatccacaaagtagtagaaaccttttcacctcatccagagactgtactg cccagtgtgaagcgcaggagaggaagaccaccaaaaagtaagaagcatctccaaacaatg atgggcttggcatctttgcaaaatgcccatttaaagatgaaagaggtccactctaaccct ctgtttcctgttcccgaagagagattcagcattagaaagctttcctccagcttggacatc attgacttccacttacctgatgaggagtttggtctgcttaagcttgaaaaactaaaagtt tgtgcagtgacacaggtggaatcctttacgcctctgccacctgaaaccagccacacggtt actaaaatagcttccaaagactctgttttggaaggaagatatcttggggaaagtacagtg gaaaagagtaatcaagactcagagtttcagttctttcatcctccatcgtcttgggcattt gtagctgatgaacattctgttacctgtgagttgccacaacagaaaaaactttgcgcaagc acacttgtaatcactcctgagtgcacagtccaaacagaagcaaatagtcctcctgcagtg agcagtggaagtgctccttttccttcactcagtttaactcctgtagtttcttccccaaaa agcagtggcagtggggtcttgcctgtttttaggcccccttcccaaatcgcaaagactctt gcagtcccggggcccagtgattctgtgaaagatgagaaaacgcatgacagtcttttgttg actgctacaccagacttggatggttggttgaatgaatcttgctggtctgcagaaaagaaa aaaaagcatgcattgctcccagggaagttcttggacaatagccgtgagcctgagatagcc gatcagcttgttaacagtggtctttttagaaattgcactctgccttgcacaggctctcag gaaatggtcatagtaaagttggatgacaaatatggccaagaaaatatcaattcaccaact tgtcaaggacattcagatacaaatgaagagaccttaaagctcatttcaacattaaagaat cactcacactcttgtggtgtagatctgtgctctgtatggtgggacattgatggaaggcga cgcttaaacattgtaatagcctgtgagaactccgtttcactttgggaatctttgcaggaa aaccagtgggaaaacacccatacctgggattttactgaggttcctgtgatacaaattgtt tctataccggaagctataaaccttatatgtgtggctctaggaaaactggaaattggagaa ataaggacactgttttactcccgtgaggaaggcacttttagacaatcgctgctacgttca ggagatatgaaaattgtcctgggtctgactgatcgaagagtagtcagttgtaacagtgga tatcgcaagcaaaatgtggaactaatttctctctcagaggaaggaagaaatgaaggaacg cttactttaatgtcgccaggagagagtattttggcatttgcggaggtagatggagaaaag gatgctttgatagccaccacagacttgtacaacattgttctttggaatataaaaactgga cagcttttgcaaagcatatctattggaaattcttatccaacttcattgtgcttgaaagct ttttcagattctgggttgttgtttgctattctgtgtaaccagcacaataataaaagtgag tcttcgctggattcggtgttgaagttggttgctatcaatccgaagaaaggtcataacagt caagtgttagcatacacgcttcctgctggatttagagggcagtacctggacggtgatgta agtggccagactgttgcagctgtgttgacttctggcgctatagtactttgggacttactg tatggacactgtactgctcaacttgcccctgaaactgatgaaagctggtcattggtcagg tgggcaaacctagattcctgtctgctggctggacaaaaagatggacatgtgcttatatat gagtatttgggaacctggagaaaataa

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