KEGG   Latimeria chalumnae (coelacanth): 102348817
Entry
102348817         CDS       T02913                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04382  Cornified envelope formation
lcm04510  Focal adhesion
lcm04512  ECM-receptor interaction
lcm04518  Integrin signaling
lcm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102348817 (COL4A3)
   04518 Integrin signaling
    102348817 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102348817 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102348817 (COL4A3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    102348817 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcm04147]
    102348817 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:lcm00536]
    102348817 (COL4A3)
Exosome [BR:lcm04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   102348817 (COL4A3)
Glycosaminoglycan binding proteins [BR:lcm00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102348817 (COL4A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 102348817
NCBI-ProteinID: XP_014342146
LinkDB
Position
Un
AA seq 1184 aa
MADIEDIIQQLLKNLALLARPHGKSGLTGLQGPIGPPGPPGSSGLRGEQGNPGPKGIMGV
NGFGPKGKKGAQGPKGPAGPPGTSDEFTILRQLKGMPGDKGDNGDEGLQGPIGIKGLCGF
GQKGLKGEQGNPGYLGMEGDAGFPGFDGEVGFKGHKGEVGFPGFPGPVKYQSLMSAEKGD
PGLSGFPGFKGIPGPAGPIGFKGMPGKADFNFINKVMYVLLGMFWPGLPGLPGTPGPPGP
KGGVGEPGKDDIGSPGPPGFPGLQGKHGPPGQPGEVKIKENPPGEPGPKGLFGALGYLGE
YGQKGDKGDICRLCASVYTEPGYPGVQGHPGKPGEPGGLGQPGPKGNFGCPGPMGPTGPW
GLQGSSGNVGPQGVKGEEGFMPLKGIKGNKGDLGFPGNSGQDGLDGIPGRPGPRGFPGQK
GEAAYPGQKGDRGIPGQPGSQGHPGDMGPPGPVGYGQQGLFGPKGNQGLPGLHGLPGSAG
PSGDPGITISVPGAPGPKGFTGFPGLPGKSGFPGFTGGLGLPGCPGIIGEPGLSKKGLPG
TTGLKGSQGPLGLPGTKGFPGAAGRQGPDGLPGPPGQKGEPGVGISGEPGRPGPIGDDGT
PGLKGNLGFPGNPGVQGRTGYDGPVGIKGEPGPAGQQGPPGSCGACQRGLPGMPGPWGPH
GVQGQTGSKGSIGSKGDPGIPGLDMPGIPGEFGPPGFSGPAGNPGPEGCKGTKGRSGVPG
ISGPQGEPGVIGPPGASGLQGFPGNCGRPGPKGFPGVSGRKGENGPQGQEGQKGEIGFPG
PQTDVKLKGDKGTPGHKGQPGCHGPKGDDGLPGLQGKKGLDGTPGPPGPPGSPGVPGSPG
IPGSVGFPGPPGDLGDMGFPGTKGEKGSFGLSGFAGPAGRPGILGNKGEKGELSCPGIGP
LGLPGQKGEPGDPGPNGGIGEQGCPGQPGLPGPPGFPGGKGNTGISGVPGPPGYLGTKGY
QGHMGAPGVPGQKGFPGEPGVPGHPGAVGEKGDPGFDGIPGQPGQKGDAGFPGKIPGLEG
ITGLKGAKGSKGPPGLAGIPGVKGPVGDQGPPGPAGLDGLPGPPGSPGPKMVGEKGARGP
PGRPGRPGSPGICGPPGLPGYGVKGDKGDKGHNGLPGHCGPPGDAGLPGRVGGDGNVGFP
GPKGEPGNIGFPGNKGWEGDPGPMGPKGRKGRPGPKGQRGKYCK
NT seq 3555 nt   +upstreamnt  +downstreamnt
atggcagacattgaagacattattcagcaacttctcaagaatctagcattgttggccagg
ccccatggtaagtcaggtcttacaggactgcagggaccaattggaccacctggccctcct
ggatcatctggtttacgaggagagcaaggtaatccaggaccaaagggaataatgggagta
aatggctttggacctaaaggcaaaaagggtgcccaaggtccaaaaggcccggctggtcct
ccaggaacaagtgacgaatttactatactgagacaactaaaaggaatgccaggagataaa
ggagataatggggatgaaggactacaaggcccaataggcataaagggtttatgcggattt
ggccagaagggtttgaaaggtgaacaaggaaatccaggttatctgggaatggaaggagat
gcaggatttcctggatttgatggtgaagttggctttaagggtcataaaggtgaagttggc
tttccaggatttccgggtccagtaaaatatcaaagtcttatgagtgcagaaaagggagat
ccagggctttctggctttccagggttcaaaggcatacctggccctgcaggtccaataggt
tttaaaggcatgccgggaaaagcagattttaacttcatcaataaagtaatgtatgtttta
ctaggaatgttttggccaggccttcctggcctaccaggaactccaggaccacctgggccg
aaaggaggtgtaggggagcctggtaaagatgatataggtagtccagggccccctggattt
ccaggacttcaaggaaaacatggacctccaggacaaccaggtgaagtcaagataaaagaa
aatccaccaggagaacctggacctaaaggcctctttggagctctagggtacttgggggaa
tatggtcagaaaggtgataaaggagacatctgtagattatgtgcaagtgtttacactgaa
cctgggtaccctggtgtacaaggacaccctggcaaacctggagaacctggtggattagga
caaccaggtccaaaaggcaacttcggatgtccaggaccaatgggaccaacaggtccttgg
ggattgcaaggttcttcaggtaacgttgggcctcaaggggtaaaaggagaagaaggattc
atgccattaaaagggataaagggaaacaaaggtgatctggggtttcctggtaactcagga
caagatggtctagatggaatacctggtaggcctggtccacgaggctttccaggacaaaaa
ggagaagcagcatatcctggacagaaaggagacagaggtatacctggacaaccaggcagc
caaggccaccctggagacatggggcctccagggccagtgggatatggtcagcaaggtctt
tttggtccaaaaggaaatcagggtttacctggattacatggattacctggaagtgctggc
ccaagcggagatcctggtatcacaatctcagtacctggtgcaccagggcctaaaggcttc
actggttttcctggattaccaggcaaatcaggttttccaggatttacgggaggtcttggc
ctaccaggatgtccaggaattataggtgaaccaggcctgtcaaagaaaggacttccaggc
acaactggccttaaaggtagccaagggccgctaggattacctgggactaaagggttcccc
ggagctgcaggaagacaagggccagatggacttccaggacctcctgggcaaaagggtgaa
ccaggagttgggatttctggagagccaggaagaccaggacccattggagatgatggcact
ccaggattaaagggtaatcttggatttccaggaaatcctggtgttcaaggacgtacaggg
tatgatggtccagttggaataaaaggagaaccaggaccagctgggcagcaaggtccacct
ggttcttgtggagcctgccaaagaggactgccaggcatgcctggtccctggggtccacat
ggagttcaaggccaaacaggttcaaaaggatcaataggatctaaaggagatcctggtatt
ccaggtttggacatgccaggaatccctggagaatttgggccacctgggttctcaggtcca
gcaggaaatcctggacccgaaggttgcaaaggtacaaaaggaagatcaggagtaccaggc
atatcaggtccacaaggtgaaccaggtgttataggtcccccaggagcttctggactccaa
ggttttcctggaaactgtggaagaccaggacctaaaggttttcctggtgtttctggaaga
aagggagaaaacggacctcaaggtcaggaaggtcaaaagggtgaaattggattcccaggg
ccgcaaactgatgtaaagttaaaaggtgataaaggcacaccaggacataaaggtcaacca
ggatgtcatggtccaaaaggtgatgatggtcttccaggtctacaaggaaaaaaggggcta
gatggcaccccaggacctccaggaccaccagggtcaccaggagttccaggttctcctggg
attcctgggagtgtgggttttccaggaccaccaggagatttgggtgacatgggctttcca
gggactaaaggggagaaaggctcttttggattatcaggatttgctggtcctgcaggacgt
cctggcattttgggcaataaaggagaaaaaggtgaactaagttgtccaggaattggacct
ctggggctgcctggacaaaagggtgaacctggtgatcccggaccaaatggtgggatagga
gaacaaggttgtcctggtcagcctgggcttcctggaccacctggattccctggaggaaag
ggaaacactggcatatcaggagtaccaggaccccctggttatcttggaactaagggatat
caaggacatatgggtgcaccaggagtccctggacagaaaggctttccaggtgaacctggg
gtcccaggacatcctggagcagtgggtgaaaagggtgacccaggatttgatggcattcca
ggtcagccaggacagaaaggtgatgcaggctttccaggaaaaattcctggcctagaaggc
attactggtcttaaaggtgcaaaaggtagtaaaggaccacctggtctagcaggaattcca
ggtgtcaagggtccagtgggagaccaaggaccacctggacctgctggtcttgatggccta
cctggaccaccaggtagtcctgggccgaaaatggttggtgagaagggagccagaggtcct
ccaggacgaccaggacgaccaggaagtcctggtatctgtggacctcctggactgccaggc
tatggtgtaaaaggagacaaaggagataaaggacacaatggactaccaggtcattgtgga
cctcctggtgatgctggtttaccaggacgagtaggaggtgatggaaatgtaggatttcca
gggcctaaaggtgaacctggaaatataggatttccaggcaataaaggttgggaaggtgac
ccaggacccatgggacctaaaggaagaaagggaaggccaggaccaaaaggacaacgtggc
aagtattgtaaatga

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