Latimeria chalumnae (coelacanth): 102348902
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Entry
102348902 CDS
T02913
Symbol
EXOSC1
Name
(RefSeq) exosome component 1
KO
K07573
exosome complex component CSL4
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102348902 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102348902 (EXOSC1)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102348902 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102348902 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
Motif
Other DBs
NCBI-GeneID:
102348902
NCBI-ProteinID:
XP_014343174
LinkDB
All DBs
Position
Un
AA seq
151 aa
AA seq
DB search
MVSRLPVISVVRESDSQLLPDVGAVVTCKVRSPTCEVHNVQELLCGGGVVFFFCCFFFFG
LKRVSAICFLQVEVYKCFRPGDIVLAKVISLGDAQSNYLLATTENELGVVVAHSEAGLQM
VPISWCEMQCPRTHTKEFRKVARVQPEYLQT
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggtatccaggctaccagttatatctgtggtaagagaaagtgattctcagcttctacca
gacgttggcgctgttgtaacctgtaaggtaagatctcctacttgtgaagtacataacgtg
caggaactgctttgtggtggtggtgttgtttttttcttttgttgtttttttttttttggt
ttgaaacgggtatctgctatttgtttcctacaggttgaagtctacaaatgtttccgacct
ggtgatattgttttggcaaaagttatctctctaggtgatgcccagtctaactacttgtta
gccaccacagaaaatgaactgggagtggtggtggcccacagtgaagcaggcttacagatg
gtcccaatcagctggtgtgagatgcagtgtcccaggacacatactaaggagttcaggaag
gttgcaagagtacagccggagtatcttcaaacataa
DBGET
integrated database retrieval system
