Latimeria chalumnae (coelacanth): 102348956 Help Entry 102348956         CDS       T02913                                  Symbol DEPDC5 Name (RefSeq) DEP domain containing 5   KO K20404   SEA/GATOR complex protein SEA1/DEPDC5 Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm04150   mTOR signaling pathway Brite KEGG Orthology (KO) [BR:lcm00001]  09130 Environmental Information Processing   09132 Signal transduction    04150 mTOR signaling pathway     102348956 (DEPDC5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lcm04131]     102348956 (DEPDC5) Membrane trafficking [BR:lcm04131]  Autophagy   Other autophagy associated proteins    SEACIT/GATOR1 complex     102348956 (DEPDC5) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEPDC5_CTD IML1 IML1_N Motif Other DBs NCBI-GeneID:  102348956 NCBI-ProteinID:  XP_014344581 Ensembl:  ENSLACG00000017261 LinkDB All DBs Position Un AA seq 1536 aa AA seqDB search MRTNKVYKLVIHKKGFGGSGKSFDQTVAQAFKLRAYQDVFINVTDPKDVTLDLVELTFKD QYIGRGDMWRLKKSLVKTAFFLTNKLSLXLLLFFFFFSRAQASELWVKGEKVTCGYISED TRVVFRSTSAMVYIFFQMSCEMWDFDSYGDLYFEKAVHGFLADLFAKWKEKNCSHEVTVV LFSRTFYDAKAIDEFPEVGRSSIQQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFI QYPVLVRLQEADDFPKGHNSTAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPG VGVFEVDRLLMILTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNKSNPADSRLGDDYNI PHWINHSFYTSSSQLFCSSFTPRIKLAGRKGCPSVWDVRYVQQTATVVQCCDYAFCILAS ALGAPKDSENSLPIQVDYDGYDAQVFRLPGPSRAQRPNNFRPIREIQTRKSSSSCDVSGS PTQSRTLPLDEVKSQASDDSSLGKISNILLIPRPHLHQYEVSSSLGYTSGREILERMMDM QQRDSSAPGRFHVGSAESMLHIRPGGYTPQRALINPFAPSRMPMKLTSNRRRWMHTFPIG PSGEAIQIHHQTRQNMAELQGSGQSDVTHSSAELLELAYHEAMGRRTTTRQPGETGLFLG SGGGVDEFATSPASSNSAGTPLNRASSYEDSISSSPDPMPGFCCTVGVDWKSLTTPACLP LTTDYFPDRQSLQNDYMEGCYDLLPEADLDRRDEDGGQMTALQVFEEFICQRLMQGYQII VQQKSKKSSSAVPPPLSSSPLYSRGLVSRNKPDEEEGQYWLSMGRTFHKVALKDKIITVT RYLPKYPYESAQIQYTYSLCPSHSDSEFSSCWVEFSHERLEDYKWNYLDQYICSAGSEDF SLIESLKFWRTRFLLLPACITATKRVMEGETRCDIYCDKPRSDEDEWQLLDGFIRFVEGL NRIRRRHRSDRMIRKGAAIKGLQVTGPMPIHPPEPVGPPVGKKGTSALSALLEMEANQKS LGEQQAVIHAGKSTGQPVETSNVAITPTYVDSPRKISLEQPITAAAASENTAVSVISNLS GERGSTGSQLPGIGYSQGSTEHVSVASGSMDSGSQQPSGISNSLTSSSTLAEILEAMRHS TWCKQQNKVFHWTFHSDIFFLFLWCFWQKMLDEQLIVHASGEAMRTFVYGFYFYGIVTER DPDRVGIQQSTIWYTAAMDDCAAFQRKWFEVAFAAEERLHTGLPAFLLPWLPSRPASYAS RHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRVEWCSCYYHGNFTLNATFE IKLHWMSVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRTQLFIPLNI NCLLKEGSDQLFDGFEPETHWDRIQLFQEAILYRFGFIQDKYSANFPSENKPQYLHVTGT VFLQLPYTKRKFSTGQQRRRRNSMNSRDQNLFGDDRIGYNWAYNTMLTKTWRSSATGDEK FADRLLKDFTDFCANKENRLVHFWESCLEKMHASAP NT seq 4611 nt NT seq  +upstreamnt  +downstreamnt atgagaaccaataaagtatataaacttgtaatccacaagaaggggttcgggggaagtggt aagtcttttgaccagacagtggcgcaggcgttcaaactcagagcctaccaagatgtcttc atcaatgtgactgacccaaaggatgtgacccttgaccttgtggagcttacatttaaggac cagtacattgggcgtggagatatgtggcgtctaaagaaaagcctggtaaaaactgctttt tttttaacaaacaaactctctttgtaactgttacttttttttttttttttttccagagca caagccagtgaactgtgggtgaaaggtgaaaaggtcacatgtggctatatcagtgaggac acacgggtggtgtttcgatcaacttcggccatggtctacatcttcttccagatgagctgt gaaatgtgggatttcgacagttacggtgacctgtactttgagaaagctgttcacggcttc ctggctgatttgtttgcaaagtggaaggagaagaactgtagccatgaggtgactgtggtt ctcttttccagaactttttacgatgcaaaggcaatcgatgagttcccagaagtgggtcgc tcctctatacaacaggatcacgagggcagattctatgaagacttttataaggttgtagtc cagaacgagaggcgtgaagaatggacttccttgttggtaaccattaagaaactgttcatt cagtaccctgtgttggtccgactgcaggaagcagatgattttccaaagggccataattcc acagctgctcagggcaactatttagaagcgatcaatctctcctttaacgtctttgacaag cactacataaatcggaactttgaccgcactggacagatgtctgtcgtcatcactcctggg gtgggcgtgtttgaggtggacagactactgatgatcctcaccaagcagcgtatgattgac aacggtatcggggttgacctggtttgtatgggtgagcagccgctgcatgctgtgccactc tttaagcttcacaacaagagtaatcctgcagattcccgcctgggcgatgactataacatc cctcactggataaaccacagtttctacacttctagcagtcagctattctgtagcagtttc actcctcgcatcaagctggctggaaggaagggatgtccctcagtgtgggacgtgcgatat gtacaacaaaccgcgacagtagtgcagtgttgcgactatgccttctgtattttggcttca gctttgggtgccccgaaagactctgagaacagccttcctatccaggtagattatgatggt tacgatgcccaggtattccgtctcccgggcccctctagggcccagcgtcctaacaacttc aggccaatacgggagattcagacaaggaagagttccagttcctgtgatgtttccgggagc cccacccagagccgcactctgcccctagatgaggtgaagagccaggcctctgacgacagc tccctggggaagatctcgaacatcttattgattccccgccctcatctccatcagtacgaa gtcagcagctccctgggctacaccagtggcagggagattctggagcgaatgatggacatg caacagcgagattccagcgcgccgggacggtttcacgtgggaagcgccgagtcgatgctg catatccgccctggtggctacaccccgcagcgagcgctcatcaacccttttgcaccctct cgcatgcccatgaagctgacgtccaacaggaggcgctggatgcacacatttccaataggc ccgtctggagaggccattcagatccaccatcagacacggcagaacatggcggagctgcag gggagcggacagagcgatgtgacccactcttccgctgaactgctggagctggcataccat gaagcaatgggcaggcggaccacaacacggcagcctggagagacgggcctgttcctgggg tctgggggaggggtggatgaattcgccaccagccctgccagcagcaacagtgcagggacc ccactgaacagggcttcttcatacgaggactccatatccagcagcccggatccaatgccc ggtttctgttgcacagtgggggtggactggaagtctctcactacaccggcgtgcttgcca ctcaccacagattacttcccagaccggcagagccttcagaacgactatatggaaggctgc tacgaccttcttccagaggctgaccttgacaggagagatgaggacgggggacagatgacc gctctacaggtgttcgaggagtttatctgtcagcgcctcatgcaggggtaccaaatcatc gtacagcagaaatcgaagaaatcctccagcgcagtgccgccgcccctcagtagcagcccg ctgtattcacgaggtttggtatcgcgaaacaagcctgatgaggaggagggtcagtactgg ctgagtatgggacgcactttccacaaggtggctttaaaggacaagatcattactgtcact cgttacctccctaagtatccatatgaatctgctcagatccagtacacttacagcttatgt ccttcccactcggattcggagttcagctcctgctgggtggagttttcccacgagcgcctg gaagactacaagtggaattacctggatcagtacatctgctctgcaggatcggaggatttc agcctgatcgagtcactgaagttctggcggacccggttcctgctgctgcctgcctgcatt acggctaccaagcgcgtcatggaaggcgagactcgctgtgacatctactgcgacaagccg cgctccgatgaggacgagtggcagctgctggacggcttcatccggttcgtggaggggctg aaccggatccgcaggcgccatcgctccgacaggatgatccggaaaggtgctgctatcaaa ggtttgcaggttactggtccaatgccgatccacccaccggaaccagtggggccccctgtc gggaaaaaagggacgtcggcactttcagctcttctagaaatggaagcgaatcagaagagc ctgggagagcagcaggcagtaatccatgctgggaagagcactggacaacctgtggagacc agtaatgttgccataacacctacctacgtagacagtcccagaaagatctcgctggaacag ccaatcacggctgccgctgcttctgaaaacacggctgtgtcagtcatctccaacctatca ggagagaggggcagcactgggtcccagctccctgggattggatactctcagggtagcact gagcatgtttccgtagcgtctggatccatggactctggctctcagcagccctcagggatc tcgaattctctcacctcttcctccactctggctgagattctggaggcaatgagacattcc acctggtgcaaacaacagaacaaggtattccattggaccttccacagtgacattttcttt ctttttctgtggtgcttttggcagaaaatgttggatgagcagttgatcgttcacgcatct ggagaagcaatgcggacctttgtttacggattctacttctacgggattgtcactgagaga gaccctgacagagtggggatccagcagtccacgatctggtatacggctgcgatggacgat tgtgcagcatttcagcggaagtggtttgaggtggcgttcgcggcggaggagaggctccac acaggacttcccgcgtttctcctgccctggctccccagccgccccgcctcatacgcaagt aggcacagttccttcagccgcagtttcggaggacggagccaagctgccgctttattagct gccacagtgccggagcagaagacggtgacattggacgtggacgtgaataaccggagcgac cgcgtggaatggtgcagctgctattaccacggaaacttcacactcaacgctaccttcgag ataaagctgcactggatgtcggtgacggcggctgtgctgtttgagatggtccaaggttgg cataggaaggctacatcctgtgggtttctattggtgccagttctggagggcccatttgct ctgcccagctatctatatggtgaccctctgagaactcagctctttatcccacttaatatt aactgtttactgaaagaagggagcgaccaactgtttgatgggtttgaacctgagacccac tgggaccgcatacagctctttcaagaggccatcttgtacaggtttggattcatccaggac aaatattccgctaactttccctcagagaacaagcctcagtacctccacgtcacagggacc gtatttctgcagctgccctacaccaagcggaagttctccacgggacagcagcgtcgccgg cgcaactccatgaactcccgtgaccagaacctcttcggagacgaccggatcggatacaac tgggcctacaacaccatgctaaccaaaacctggcggtcgagcgccacgggagacgagaag tttgccgaccggctgctgaaggatttcacggacttctgtgccaataaggagaacaggctg gtccacttctgggagagctgcttggaaaaaatgcatgctagtgctccctga

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