Latimeria chalumnae (coelacanth): 102349057
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Entry
102349057 CDS
T02913
Symbol
SOGA1
Name
(RefSeq) suppressor of glucose, autophagy associated 1
KO
K27704
microtubule cross-linking factor
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcm03036
]
102349057 (SOGA1)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
102349057 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
USH1C_N
Motif
Other DBs
NCBI-GeneID:
102349057
NCBI-ProteinID:
XP_014342251
LinkDB
All DBs
Position
Un
AA seq
1709 aa
AA seq
DB search
MESGPGDQAVQKEPAAGEKKKINRAPSPARPKDVPGWSLKKPRGSGVGAGTALGAKGGLQ
ARVSRRSPGNGLKTEKKASLKVSSPGPGGSKTPGRSAKSSRRSKGSSGGGEEEVGIPSEP
CAPAAALCPTDSSSELSDCTSEENKLSLEGLSSDAESGRDAGRRLETPGSESAAGGLPAE
DSASPVVDEQSAFSLDSKLQLSASLAFSDLTEELLDGMQDELLREMDELRSENDYLKDEI
EELRSEMLEMRDLYMEEDVYQLQDLRQQLDQANKTCRILQYRLRKAERRSLRVAQTGQVD
GELIRNLEQDVKVAKDISVRLHNELEAVEKKRIKLEEENEDLREKLIEMDLSKQVLQNEM
DKLKENSLKKRGTRVGNKTDKKTSPQEDSADLKCQLHFAKEESALMCKKLSKLAKENDSM
KEELVKYRSLYGDLDSSLSIDEVADSPHSREAELKVHLKLVEEEANILSRKIVELEIESR
GLRAEMDEMKCQHEREFPSSDVKMVVASGSCGESGESIVELRRHLQFVEEEAELLRRSLI
ELEDQNKFLMNELNKYKSEHDLDMTMSEDSCSVISEPSQEELVTAKLQISELSGKVKKLQ
YENRVLLSNLQRCDLASCQSTRPIMETDAEAGDSAQCVPTLLRREGPIGDNFTFDTPSLL
RAKDFEVLLAIKDQAGLISKAIDLLISDTNGLMSGPRLCLDISCTEQPMSESSDNTETDS
DSRMVDSIVVRLSILKRELSSFIQKVDNLGDSLKEQVESLSTLPDSGSFLSTDSLLGTDL
GQMYQPPEFREPDDWELSQNRGAESYLKSADVDQSRETTRDCKLYSSDDNESYSAEIQEL
QLVLSEAKDSIQGLQEQLSQERHLRREEAEIFTKKMFQQKEEHQKALLRREFELQSLHLQ
RRLEQKFWSQEKNLLLQESQQFKQNILLLYMKLKRFLRHWKQDMKLNSEGEDFLEVNSMK
DLYLLIEEEELNPQQVEKKPAKGENSSENSGPSECGPVLAGLKLILKDLCTDLREESRGM
NELQQQFAKAKSAWEIEKTELKCQIAQLESKVGKQVCEKASLDLKSALMREREEHQHLLA
ESYSAVMDLTKQLQISEKNWNREKLDLLDRFDSEQKQWEQRARDMQNKINQLQKEADPWV
LKHSNLEKNSSCWKETLQEILSEKELASETDVKGTNLKRTKSVSSMSEFESLLDSSPYLP
GMSCPVNNENVRGKTPSSPSQTLPNSLTDLEEHSKRNSKYANNDKTVTENKAKGILGASS
WDCSMVSNAPTRDSTQKQIQRSYTAPDKTGIRIYYSPPVMRRLDGSLVQQNKEKIMVEPG
FLFTMAKPEKTEELESSSENKCSRWLCNLSKQKRDLLDGTSVDHTVQSTPGFPSSLPDLE
ISGNMSDDMKEITNCMRQAIRSSSLERKVKNTSSQTVGVTSVGTQTIQTVSVGLQTESPR
ASIHTKNWSSRSSSLLSTRSKQISSSLNKVHSRIERPCCSPRYGSPKLQRKTSSKLESSK
DRSLWHSSRQNESAWARSTTTRDSPVLSGINDGLSSLFSVVEHTSGSTESIWKPSPQESR
TKTETPKYGIVQEFFRNVCGRSQSPTPGTEKPQKDTAVIEDGSKRADLSSLVSQSDNASK
PSNKKLLKQNCSEEHKLPTLNQGSKDTNTRESAAALATANEDTACDCTSQSLTSCFARPS
RSSARHATSHCQFHSSDPNRIEDKTSSSE
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggacctggagatcaggcggtgcaaaaagagccggctgccggggagaaaaag
aagatcaaccgggctccttccccggccagacccaaggatgtgcccggctggtccctgaag
aagccccggggcagcggggttggagccgggaccgccctgggagccaagggggggctgcag
gccagggtgtcccggcggagtcctggcaacgggctgaagacggagaagaaggcgagtttg
aaggtgagctccccggggccagggggcagcaagacgccaggcagatcggcgaaaagcagc
cggcgatcgaaggggtctagcggcggcggggaagaggaggtggggatccccagcgagccg
tgcgccccggctgcagcgctctgtcccacggacagcagctctgaactttcggattgcacc
tcggaagagaacaagctgtcgctagaggggctgagcagcgacgccgagtccggccgggat
gcggggcggcgattggagacccccggctcggagagcgctgcgggtgggttgccggccgag
gacagcgcctctcctgtggtggacgagcagtctgctttctccctggacagtaagctgcag
ctcagcgcctcgttggcgttctccgacctgactgaggagctgctggacggcatgcaggac
gagctcctccgggagatggacgaactccgctccgagaatgattatctgaaggatgagatt
gaagagctccgctcagagatgttggaaatgagggacctgtacatggaggaagatgtatat
cagctccaggatcttcgccagcagctggaccaggctaacaagacttgccgtatccttcag
taccggctgcgcaaagcagagaggcgaagcctacgggtcgcccagaccggacaggtggat
ggagaactcatccgcaacttagagcaggatgtcaaggttgccaaagacatctcggtgcgg
ctgcacaacgagctggaagctgtggagaaaaagaggatcaaactggaggaagaaaacgaa
gacctgcgggaaaagctgattgaaatggacctttccaagcaggtccttcagaatgaaatg
gacaagctcaaagagaattccttgaagaaaagaggcacccgggttgggaataaaactgac
aagaagacctcacctcaggaagacagtgcagacctgaagtgccagctgcactttgccaag
gaagaatctgctcttatgtgcaaaaaactgtcaaagttagcaaaagaaaatgacagtatg
aaggaggagctggtaaaatacaggtcactgtatggtgacttggatagttctctgtcgatt
gatgaggtagctgattctcctcactcaagagaagctgagctcaaggtgcatcttaagctt
gtggaagaggaagccaacatcttgagcaggaagatagttgaacttgagattgaaagccga
ggcctgcgagcagaaatggatgaaatgaagtgtcaacatgagagagaatttccaagttca
gatgtcaagatggttgtggcttctggaagctgtggagaatctggagagagcattgtggaa
ctcagaagacatcttcagtttgttgaagaggaagcagagcttctaagaagatctctaatt
gagctggaagaccaaaataagttccttatgaatgaactaaacaagtataaatctgagcat
gacctagacatgactatgtcagaggatagctgctctgtaatcagtgagccttcacaggaa
gagttggtaacggccaagctacaaatcagtgaactcagtgggaaagtgaagaagcttcag
tatgagaatcgtgtccttctttccaatcttcaacgttgtgacttggcctcctgtcagtct
acacgaccgatcatggagacagatgcagaagcaggagattctgcacaatgtgttccaaca
cttctcaggagggagggaccaattggagataacttcacttttgatactccaagtttatta
cgagcaaaagactttgaggttctgcttgctatcaaagatcaggctggacttattagcaaa
gcaattgatcttctgatttctgacacaaatgggttaatgtctggccctagactctgttta
gacatctcttgcacagagcagccaatgagtgagagtagtgacaacactgaaacagacagt
gactccaggatggtggattccattgttgtccggctcagcatcttgaagagagaacttagc
tcttttattcagaaagtggacaaccttggtgactctcttaaagaacaagtggaaagtctg
tccacactgcctgattcaggaagctttttgtccaccgacagcctgctgggaactgatttg
ggccagatgtaccaacctcctgagtttagggagccagacgactgggagctgagccagaat
cggggagcagagagttacttgaagagcgcagatgtggaccaaagcagggaaacgaccaga
gactgcaaactctacagctctgatgataatgaatcctacagtgccgagatccaggagctg
cagctcgttttgtcagaagccaaggacagcatccaggggctgcaggagcagctttcccag
gagcgccatctgagaagggaggaggcagaaatcttcaccaagaaaatgtttcagcaaaaa
gaagagcatcagaaggcccttctgaggcgagagtttgagttgcagagtttacatttgcag
aggcggctagaacagaagttctggagtcaggagaaaaacctgttactacaggagtcccag
cagtttaagcagaacatcctgctgctctatatgaaactgaaacggttcctcagacactgg
aaacaggacatgaagctcaacagtgaaggagaggactttctggaggtaaacagcatgaaa
gatctgtacctgctgattgaggaggaggagctaaaccctcaacaagtggagaagaaaccc
gccaagggggagaactcttcagaaaattccgggccgagtgagtgtggcccagtgctggca
gggctgaagctgattctgaaggatctctgcacagacctgcgggaggagagccgggggatg
aacgagctccagcagcagtttgcgaaggctaagtccgcctgggagattgaaaagacagaa
ctcaagtgtcagattgctcagctggagtccaaggttggaaagcaggtttgtgagaaagcg
tcgctggatctgaaatctgcccttatgcgtgagcgggaggaacaccagcatctgctggca
gagtcctacagtgcagtgatggacctgaccaagcagctgcagatcagcgagaagaactgg
aaccgtgaaaagctggacctgctggacaggtttgacagtgagcagaagcagtgggagcag
cgcgccagagatatgcagaacaaaatcaaccagctgcagaaagaagctgatccctgggtt
cttaaacactccaacctggaaaagaacagcagctgctggaaagagactctgcaggaaata
ttaagtgaaaaagaacttgcttctgaaacagatgtgaaggggactaacttgaaaaggact
aaatctgtttcatctatgtctgagtttgagagtcttctcgattcttctccataccttcct
ggtatgtcttgccctgtaaacaatgaaaacgtccgaggaaaaaccccttcctcaccctca
cagacactaccaaactccttgacagatctggaggaacacagcaaacgaaactcaaaatat
gcgaacaatgacaagactgtgactgagaacaaggctaaagggatcctgggtgccagttcc
tgggactgttccatggtgtccaatgcacccacccgtgactctactcagaagcaaatccaa
agaagctacacggccccagacaaaactggtatccgaatctactacagccctccagttatg
cgcaggctggacggttccttagttcagcaaaacaaggagaagattatggttgaaccaggg
ttcctgtttaccatggcgaaaccggaaaagactgaggagctggagagttcatctgagaat
aaatgtagcagatggctttgtaacttgtctaaacagaagagggatctgcttgatgggaca
tctgtggatcacactgtgcagtcgacacctggattcccatcctccctgcctgaccttgaa
atatcaggcaacatgagtgacgacatgaaagaaatcacaaattgtatgaggcaagccatc
cgctcaagttcactggaaagaaaagtgaagaacacttctagccagactgtcggagttaca
agtgttgggactcaaacaatacagacggtgagtgttggccttcaaactgaaagtccaaga
gccagcattcacaccaagaactggtcatccaggagctcttctctattgtccactcggagc
aagcagatttcttcctcattgaataaagtccactccagaattgagcgaccatgttgctca
ccccgatacggctctccaaagctacagcgaaaaacttcgtctaagctcgagagttccaag
gaccgaagcttatggcattccagtcggcagaatgaatctgcctgggcaagatccaccaca
accagggacagcccagttttgagtggcatcaacgatggcctctcaagtttgtttagtgtt
gtggagcacacctctggaagcactgaatcaatctggaaaccaagtcctcaagaaagccga
acaaaaacagaaacaccaaaatatggaattgtccaagaattctttcggaatgtgtgtggg
aggtctcaaagtccaaccccaggcactgagaaaccccagaaagatacagcagttattgaa
gatggcagtaagagagcagacttgtcttctctagttagtcaatcggataatgcctcaaag
ccttcaaacaaaaagcttcttaagcagaactgcagtgaggaacacaaactaccaacccta
aaccaaggtagcaaagacaccaatactagagagtctgcagcagctttggctactgcaaat
gaggacacagcatgtgactgcacctcccagtcactcacttcctgcttcgcccgcccatca
agatcatcagcccgccatgccacatcgcactgtcaatttcactcctctgatccaaatagg
atcgaggacaaaaccagctcatcagagtaa
DBGET
integrated database retrieval system
