Latimeria chalumnae (coelacanth): 102349119
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Entry
102349119 CDS
T02913
Symbol
DDX1
Name
(RefSeq) DEAD-box helicase 1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102349119 (DDX1)
03016 Transfer RNA biogenesis [BR:
lcm03016
]
102349119 (DDX1)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102349119 (DDX1)
Spliceosome [BR:
lcm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102349119 (DDX1)
Transfer RNA biogenesis [BR:
lcm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
102349119 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
102349119
NCBI-ProteinID:
XP_006006210
Ensembl:
ENSLACG00000010529
UniProt:
H3AQP2
LinkDB
All DBs
Position
Un
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDHQEGKKGKATVKTGGSVFSKWQMNPYDRGSAFAIGADGMCCQSREIKEWH
GCRSTKGVTKGKYYYEVSCHDQGLCRVGWSTLQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDVDKGYIKFSKNGKDLGFAFEIVSHLKNQSFFAACVLKNAELKF
NFGEEEFKFPPKDGFVAFGKAAEGHVAKSHHTGTAQVGQTKNLPNAPKALIIEPSRELAE
QTLNNVKQFKKNVENPKLRELLIIGGVAAKEQLAVLESGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLTQGYSDFINKIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVAVPVNPKKDKLWERLSKNHIRTDEVHARDNTRPGSN
SAETWSEAVKVLKGEYIIRAIKEHKMDQAIIFCRTKLDCDNMEQYFIQQGGGPDRRAHQL
SCVCLHGDRKPHERKQNLDKFKRNEVKFLICTDVAARGIDISGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVSTEKEKVWYHVCASRGKTCNNTRLKEDGGCTIWYNEMQLLG
DIEEHLKCTISLTEPDIKVPVDDFDGKVTYGQRKAAGGGLYKGHVDILAPTVQELAVLEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttttctgagatgggtgtcatgcctgagattgctcaggctgtagaggagatg
gattggcttctccctacagatatccaggccgagtccattccattgattctgggagggggt
gatgtacttatggcagcagaaaccggcagtggcaaaactggggctttcagtattccagtt
attcaaattgtatatgaaacattgaaggaccaccaagaaggcaaaaagggtaaagccact
gtgaagactggaggttcagtgttcagcaaatggcagatgaacccttatgacagaggatct
gcttttgctattggagcagatggtatgtgctgtcagagcagagagataaaagaatggcat
ggatgtcgatcaacaaaaggagtgacaaaggggaaatactactacgaagtatcgtgccat
gatcaaggtttgtgcagagttggatggtctacattgcaggcatccttagacttaggtact
gacaagtttggatttggatttggtggaactggaaagaaatcccacaataaacagtttgac
agttacggggaggaatttaccatgcatgacactattggatgttaccttgatgtagacaaa
gggtatatcaagttttccaaaaatggaaaagatcttgggtttgcatttgaaattgtatcg
catttgaagaaccagtccttctttgctgcttgcgttttaaagaatgcagagctgaagttt
aactttggtgaagaagaatttaaattccctcccaaagacggttttgttgcttttggaaag
gctgcagaaggtcatgttgctaaatcacatcatacagggactgcacaagtgggtcaaact
aagaacctcccaaatgctccaaaagcacttattatagaaccctcaagagagctggctgaa
cagactttgaacaatgtcaagcaatttaagaaaaacgtagagaatcctaaactgagggaa
cttttgatcattgggggtgttgctgcaaaggaacagctagcagtcctagaaagtggagta
gatattgttgtgggaactcctggaagacttgatgatctggtgtctactggaaaactcaac
ttgtctcaagttcgattcttggttctggatgaagctgatggtctgcttacccaaggctac
tcagatttcataaacaagatccataaccagattcctcagatcacttctgatggaaagagg
ctacaggtgatagtctgctctgcaactctgcattcctttgatgtgaagaaactgtcagaa
aagataatgcattttcccacctgggttgatctaaaaggagaagactctgtccctgagacg
gtacatcatgtcgctgtacccgtcaatccaaaaaaggacaagttgtgggagaggctgagc
aaaaaccatattcggactgatgaagtacatgcaagggacaatacaagacctggtagtaat
agtgcagagacctggtctgaagctgttaaagtcctgaagggagaatatatcatccgggca
attaaggaacataaaatggatcaagcgatcatcttttgtagaactaaactggactgtgat
aacatggaacagtattttatccaacaaggaggaggcccagacagaagagcacaccagttg
tcatgtgtgtgcctgcatggtgaccgaaaacctcatgaaagaaagcaaaacttggacaaa
tttaagagaaatgaagtaaaatttttaatctgtactgatgtggctgctagaggcattgat
atctctggcgttccttatgttatcaatgtaactctccctgatgaaaagcagaactatgtg
catcgtattggacgagtaggtagagctgaaaggatgggtttggctatttccttggtgagc
actgaaaaggaaaaggtttggtaccatgtatgtgctagtcgtggaaaaacttgcaataac
actagactgaaggaagatggtggctgtaccatatggtacaacgaaatgcagttgctgggt
gatattgaagagcatctgaaatgcaccatttccctgactgagcctgatattaaagtacct
gttgatgattttgatggaaaggtaacctatggacaaagaaaagctgcaggaggtggactg
tacaaaggccatgtggatattttggcacctacagtccaagagttggctgtccttgaaaag
gaggcgcagacatctttcttacatcttggctatcttcccaaccagctgtttagaactttc
taa
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