Latimeria chalumnae (coelacanth): 102349137
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Entry
102349137 CDS
T02913
Symbol
TSKU
Name
(RefSeq) tsukushi, small leucine rich proteoglycan
KO
K08130
tsukushi
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcm00535
]
102349137 (TSKU)
Proteoglycans [BR:
lcm00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
102349137 (TSKU)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_6
LRR_9
LRR_EndoS
LRR_14
LRR_NXF1-5
LRR_RPS2
LRRNT
Motif
Other DBs
NCBI-GeneID:
102349137
NCBI-ProteinID:
XP_006010526
Ensembl:
ENSLACG00000005499
UniProt:
H3A980
LinkDB
All DBs
Position
Un
AA seq
367 aa
AA seq
DB search
MFGNDCLQFMFTDQKMLLSGCLSLFLILHCLDALKTCFPGCHCEVESFGLFDSFSLTKVD
CSGIGPDIAPVPIPLDTSYLDLSSNELKTIKESMLTGPGYTTLVSLDLSYNQITKVSTST
FSKLRYLETLDLSHNSLEAIQDGSFSNLPLGDVDLSNNKLHDFNLDLFTSKGHRKPINID
LSNNLVTTILRSLDKSIPNIQSLNLAGNRLMSVPNLQSIPLRYLNLDCNPISKIEGNAFF
SLKELMHLSLSNLQDLAEVSSNGFKGLQNLQVLDLSSNPKLQFLQADAFLGLNSLQELNL
SDTGIASLTKDVVNYLPAIKSIMLGKNIHCWKTIKTGQFHRQIGITKKGEVLNCYDTNRS
IATGYVL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaaatgattgtctccaatttatgtttacagatcaaaagatgcttctgtcaggg
tgtctcagcttgttcctcattcttcattgtcttgatgctctgaagacctgctttccaggc
tgtcattgtgaggtggagagttttggactgtttgacagcttcagcttgaccaaagttgac
tgcagtgggattgggcctgacattgcccccgtccccattcctttagacacatcttacctg
gatctgtcctcaaatgaactgaagaccatcaaagagtccatgctgactgggcctggttac
accaccttggtcagccttgacctcagctacaaccaaataaccaaggtttcaaccagcacc
ttctctaagctgagatacttggagacgttggacttgagccacaattctttggaagctatt
caagatggaagtttttcaaacctaccccttggagacgtagacctaagcaacaacaagctt
catgatttcaacttggatctttttacatcaaaagggcacaggaagcctattaatatcgac
ttatctaacaacttggtgaccacaattttgagaagcctcgataaaagcattccaaatatc
cagagtcttaacttggcaggtaataggctgatgtctgtgccaaatcttcaaagtattccc
ctaaggtatttaaatcttgattgtaaccccatctcaaaaattgaagggaatgcttttttt
agtctaaaagaattgatgcatctgtctcttagcaaccttcaggatttagctgaagtttct
tcaaatggttttaaaggactacagaatctgcaggtattggatttgtccagcaaccccaaa
ctgcagttcttacaagctgatgcctttcttggtttgaattccctacaggagctgaacctg
tcagatactggcatagcttctttgactaaggatgtggtaaattacttgcctgcaataaaa
agcatcatgttggggaaaaacatacattgttggaagaccataaaaacaggccagttccac
aggcaaattggaataaccaaaaaaggagaggtgttgaattgctacgataccaataggtca
atagctacaggctatgtcttgtga
DBGET
integrated database retrieval system
