Latimeria chalumnae (coelacanth): 102349145
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Entry
102349145 CDS
T02913
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03022
Basal transcription factors
lcm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102349145 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
102349145 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102349145 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102349145 (GTF2H1)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102349145 (GTF2H1)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102349145 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
102349145
NCBI-ProteinID:
XP_014340763
Ensembl:
ENSLACG00000011123
LinkDB
All DBs
Position
Un
AA seq
560 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHTGETTNFHFANDNSAIKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAVDNSSSNNKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKQKYAENVPHNMTEKEFWTRFFQSHYFHRDRINTGSKD
LFGECAKMDEKGLKTMVGQGVKNPLVDLTSLEDKALEEGYGIFSVPSTSNSFKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHCSETSSTDGNSRDSDCFQPPLKKKHMKSLEKS
KTLVKLQEAIEYEDLEESNGLKTVALSLKKSDRYYYGPTPVQSQQYATSQDIINSLHCVK
QEMSNYVPNLTQVLSSSAASSAITALSPGGALMRGGIQQAINQMVPNDIQCELKHLYVAA
GELLRHFWTCFPVNTPFLEEKLMKMKSNLERFQATKLRPFQEKMQRQYLDKNLTSHLEEM
LQTAYNKFHTWQSKRMMKKT
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctcctcggaagaagtgctgctgattgtgaagaaggtgcgtcaaaagaaacag
gatggggcattatacctgatggctgagaggattgcatgggcacctgagggcaaggacaga
tttactgtcagccacatgtatgcagacataaaatgtcagaaaatcagtcctgaagggaag
gctaaaattcagctacagctggtcctgcacacaggggagacaaccaacttccactttgct
aatgacaacagtgccataaaagaacgggatgcagtgaaggacctccttcagcagctcttg
cctaagttcaaaaggaaggcaaacaaggagttggaggaaaagaacaggatgcttcaggaa
gaccctgttctgttccagctctataaggaccttgtagtaagtcaggtgatcagtgcagaa
gagttctgggccaatcgtctcagcctgaatgcagtagacaactcttcatccaataacaaa
caggatgttgggatttctgcagcttttctggcggatgttcgaccccagacagatggctgt
aatggtctcagatataacttgacctctgacattattgaatccatattcagaacctatcct
gcagtaaaacagaagtatgcagaaaacgttcctcacaacatgacagaaaaagagttctgg
acacggttcttccagtcgcactattttcacagggatcggatcaatactggttcgaaggac
ctttttggagagtgtgccaaaatggatgaaaaggggttgaagaccatggtgggacagggg
gtgaaaaaccctctggttgatttaacgtcactggaggacaaagcactagaagaaggctat
ggaattttctctgtaccatccacttccaactccttcaagtccattaaagaaaatagcaat
gctgctattatcaaacggtttaatcatcatagtgccatggttctggctgctggacttaga
aaacaagaagcacaaaatgatcattgcagtgagaccagcagcactgatggaaactccagg
gattccgactgctttcaaccaccattaaagaagaagcatatgaaatctttagagaaaagc
aagacactggtgaagttacaggaagccattgaatatgaagatcttgaggagagcaatgga
ttaaaaacagttgcactgagtcttaagaaatctgataggtattattatggcccaactcct
gttcagtctcagcaatatgcaactagccaggatattattaattcgctgcactgtgttaag
caagaaatgtctaactacgtacccaacctcactcaggtactttcaagcagtgctgctagt
agtgccatcactgcactttcacctggtggagccctcatgcggggaggaatacagcaagcc
ataaatcagatggtgccaaatgacattcagtgtgaattaaaacatctatatgtggcagca
ggggagcttctgagacatttctggacatgttttcctgtaaatacaccattcctagaggaa
aagcttatgaagatgaagagcaatttggaaaggtttcaagctacaaaattgcgaccattc
caagaaaaaatgcaacggcagtacttagacaaaaatttgacaagtcatctggaggaaatg
ctacagactgcttataataaatttcacacatggcagtccaagcgcatgatgaagaaaacg
tga
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integrated database retrieval system
