Latimeria chalumnae (coelacanth): 102349314
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Entry
102349314 CDS
T02913
Symbol
PCDH18
Name
(RefSeq) protocadherin-18
KO
K16499
protocadherin delta 2
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcm04515
]
102349314 (PCDH18)
Cell adhesion molecules [BR:
lcm04515
]
Cadherins
Protocadherins
102349314 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
TMEM154
MpPF26
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
102349314
NCBI-ProteinID:
XP_006005284
Ensembl:
ENSLACG00000003658
LinkDB
All DBs
Position
Un
AA seq
1153 aa
AA seq
DB search
MVANRNQIYSSRFTAMDCKNLQLYHTFCTAQFVFIILLIVTLQSQDTLGKTLEYKIYEEQ
RVGSVIASLSEDVADVLARLPNPSSVRFRAMQRGTSPLLLVQEENGEISIGAKIDREQLC
QKNLNCSIEFDVITLPTEHLQLFHVKVEVMDINDNSPQFSRSVIPIEISESAAVGTRIAL
DSASDLDVGENSLYTYSLSPNEYFDIEVRTRTDGAKYAELIIVRELDRELMSTFQLQLTA
SDRGVPQKSSFSIVKISISDSNDNSPMFEEQSYIIQLLENSPVGTLLIDLNATDPDEGAN
GKVVYSFSSHVSPKIHETFKIDPENGHLSLIKQVDYETIKSYEIDVQAQDLGPNSIPGHC
KIIIKLVDVNDNKPDININLMTPGREEVAYISEGAPMDTFVALVSVQDKDSGLNGEVVCK
LHGHGHFRLQKTYENNYIIFTNTSLDREKRSEYSLTVIAEDKGIPNLSTVKHFTVQITDE
NDNPPHFQKSRYEIFLSENNSPGVYITSVMASDPDEEENGQVTYTILESYILGNSITIYL
TIDPSSGAIYALRTFDHEEVNRIVFVVQARDGGSQQLISNSTVILTIIDENDNPPVIVSP
ALHNGTAEISIPKDAEHGYLATIIRATDRDSGINSELSCAITASSQDGIFTIDAKTCEVF
TNISMEKVPCSDWEITVEVKDKGSPQLHAKAALKFTLFELLNEDFRPIPTISSHTSLDVS
LIIIISLGAICTVLLIIMIIFIAKCNREKNDTNSYNCRVAESTYQNHPKRPSKQIYKGDI
TLVPSANGTLPIRSHHRSSPLSTPTLERGQMSSRQSQHSRQSLSSLVTISSNHVPENLEL
THSTPPVEQVSQLLSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGHGDSEAG
DSDYDLGRDSPIDRLLGEGFGDFFSADGHRVSAVMKLCTDECRVLGHSDQCWMPPLPSPS
SSDYRSNVYIPGEELHQHQQPLEEDCQSVDSSERKKSFSTFGKETLNEETDDMCTSSFLT
EMNSVFQRLLPPALDTYTECNEVEQLNSLERRKGQLPAKTLAYPQGVAAWAANTYFQNPG
STMGQSNGAHLSMQPTSKWLPAMEEIPENYEEDEFDNVLNQFNVNRRESKHELMDASELV
AEINKLLQDVRQS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggttgccaataggaatcagatttactcatcaagatttactgcaatggattgcaagaat
ttacagttgtatcatactttttgtactgcacagtttgtgtttattattttattgatagtt
actttgcaaagtcaagacacactgggtaagacattagagtacaaaatttatgaagagcag
agagttggatctgtgattgcaagtctgtcagaggatgtggctgatgtattagccagattg
cctaatccttcttctgtccgcttccgagccatgcagagggggacctctcctttgctttta
gtccaagaagaaaatggagaaataagcattggggctaaaattgaccgggaacagctctgc
cagaagaacttgaactgttctattgagtttgacgtgattaccctccccactgagcatttg
caacttttccatgttaaagtggaggtgatggatataaatgacaactcaccccaattttcc
aggtctgtgattcctattgaaatctctgaaagtgctgctgtgggaaccagaatagcattg
gacagtgcttctgaccttgacgttggagaaaactccctctatacttattcattatctcca
aatgaatattttgatattgaggtgcgaacaaggactgacggtgccaagtatgcagaactg
attatagtacgagaactagacagggaactcatgtctacctttcaacttcagctgacagct
tcagacagaggtgtacctcaaaaatctagcttttccattgtgaaaatcagtatttctgac
tcaaatgacaatagtccgatgtttgaggagcagtcatatattattcaactcttagagaac
tcaccagtggggactttactaatagacctaaatgccactgatccagatgagggcgctaat
ggcaaagtagtttactcctttagtagccatgtctctcctaaaatacatgagacatttaaa
atagacccagaaaatggacatttaagcctcataaaacaggttgactatgaaactatcaag
tcctatgagatagatgtacaagcacaagacctggggccaaactccatcccaggtcactgc
aaaattattatcaaactcgtggatgtcaatgataacaaaccagacataaacatcaaccta
atgactcctggcagagaggaggtagcttatatttcagaaggggcacccatggacactttt
gtggctttggtcagtgtgcaagacaaggactctggtttaaatggagaggtggtatgcaaa
cttcacgggcatggccacttcagacttcaaaaaacctatgaaaataactacattattttt
acaaatacaagtttagatagagagaaaagatcagaatacagtctcacagttatagcagag
gacaagggaataccaaatctctccacagtgaaacactttactgtacagatcacagatgag
aatgacaatccaccccatttccagaaaagcagatatgaaatcttcctgtctgagaataat
tcacctggagtatacatcacctctgtgatggcgtcagaccctgatgaagaagaaaatgga
caagtgacgtacaccattttagaaagttatattctaggtaactctatcactatctattta
accatagacccctccagtggcgcaatttatgctctaagaacctttgaccatgaggaagtg
aacagaattgtttttgtggttcaagctagggatggagggagtcagcaacttatcagtaat
tccacagttatattgacaataattgatgaaaatgacaaccctccagttatagtttcacct
gctttgcataatggcactgctgaaatttctattcctaaggacgctgaacatggctacctg
gcaaccattataagggccactgatagagactctggcattaactctgaattgagctgtgcc
attacagcaagtagtcaagatggcatttttacaattgatgccaagacatgtgaagttttt
accaatatcagtatggaaaaggttccctgctcagattgggaaatcactgtggaagttaaa
gataaagggagtccacaactacatgccaaagcagctttaaaatttaccttgtttgaactt
ttaaatgaggatttcagacccatacccactatcagtagccacacttccttagatgtttca
ttgatcattattatatcactgggagccatttgtactgttcttttgattattatgataata
tttattgctaaatgtaatagagagaagaacgacactaattcttacaactgccgtgtggct
gaatctacttaccaaaaccatccaaagagaccatcaaagcagatttacaaaggagacatc
accctggtgccctcagctaatggcacattgcccattagatctcatcacaggtcctctcct
ttgtcaaccccaaccttggaaaggggacaaatgagcagcagacaaagtcagcatagccga
caatcactcagtagtctggtgacgatctcatcaaaccatgtgcctgaaaacttggaactc
actcattcaactccacctgtagagcaggtttcccagcttttgtctatgcttcaccaaggt
caataccaaccaaggccaagctttagaggaaataagtattcaaggagctacaggtatgct
ctgcaagacatggataaattcagcctgaaagacagtggccatggtgacagcgaggcaggt
gacagtgactatgatttgggcagagattctccaattgacaggcttcttggggaaggattt
ggtgacttcttcagtgcagatgggcacagagtttcagcagtgatgaagttatgcacagat
gaatgcagagtattgggacactcagatcagtgctggatgccacctcttccttctccatcc
tcttctgactatagaagcaatgtgtatattccaggagaagaactccatcagcaccaacag
ccacttgaagaggactgtcagtctgttgactccagtgaaaggaaaaagagcttttctacg
tttggcaaagaaactttaaatgaagagacagatgatatgtgtacctcctcctttcttaca
gaaatgaacagtgttttccagcgcttgctgcctccagcactggacacttacacagaatgc
aatgaagtggagcaactgaattcattggagcgcaggaagggacagttgccagctaagact
ttagcttatccacaaggagtagcagcttgggcagcaaacacttattttcaaaatcccggg
agtaccatgggccaaagcaatggggctcatttaagcatgcagcccacctcaaaatggctt
ccagccatggaagaaatcccagaaaattatgaagaagatgagtttgacaatgtcctcaac
cagtttaatgttaatcggcgtgagagtaaacatgaactcatggatgccagtgagctggta
gcagaaattaacaaactgttacaagatgtcaggcaaagctag
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