Latimeria chalumnae (coelacanth): 102349367
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Entry
102349367 CDS
T02913
Symbol
PMS1
Name
(RefSeq) PMS1 homolog 1, mismatch repair system component
KO
K10864
DNA mismatch repair protein PMS1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102349367 (PMS1)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
102349367 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
102349367
NCBI-ProteinID:
XP_005996597
Ensembl:
ENSLACG00000014506
UniProt:
H3B3J2
LinkDB
All DBs
Position
Un
AA seq
932 aa
AA seq
DB search
MRQLPPETVRLLSSCQVITSVVSVVKELVENSLDAAATSVDIKLENYGFDRIEVRDNGDG
IKAVDAPVMGVQHYTSKITSHEDLESLHTYGFRGEALGSICAVSEVIITTKAVDEEVSTQ
YTLDDRGHVISQKPSHLGQGTVVTALKLFKNLPVRKQFYSNTKKCKEEIKKIQDLLMAYS
IIKPELRVTLTHNKAIVWQKVKVSDHKMALMSVLGTTILSNMLSFQHHHEDPEISLNGFL
PKPDSDRSVTSLTNPDKSFIFVNCRPVHHKEILKLVREYYNLQSSKESSRSRYPIFFLNI
TISASTIDVNLAPDKTQIMLQNKEAVLSAIENILIGLYGPLTVDSLQSGDNQTEGVFNEV
LNETRSYNCNRISDDDPSFILKNNDPNVQAERTENSSKSWSFCIENSDCCLGKNVNSSND
APSSNVLEARSLDSARSYEEGQSNKNACDINVTFTLDDSLLRDSHTQCNREDFLKPGQVT
EVNQDVMVAKDLFKVSADSWSKGHTPLDSAGEKLEPVKILAPWEGEILEQKTDDKIKLQS
PGKPSPKRSPSSRVSNVVADKVGQITAYDLISNQIIRKPMSASDTFIQEARPRILAETPA
ASVQEVSKKVDKMWKNLSEEEKKKYEEKAAKDLERYNMQTKKAMEQCDNRPIKGGEKKLR
SQQHKLKAPLSNQQLLDKLFQSQAEKKSRLAQPVKTVQVPYSLSSLKHRLQQLAVKCNSD
NTGLHLIGCLSSHSMWIVASERKLMFLNPLRVEEALLFKRLLEKHILPAEALDTPIVLSD
SLLGGPEYTDSLCSMQKESAQLNGLTYFSDPRLVANGFKIRVIPGTSVKEKQLEIEGMAN
CLPFYGASDLREILRAVVNKNARKVEECRPRKVINYLEGEAVRLGRQLPLHFSKEDIQDT
IHRMKQQLGNESKGCVHGRPFFHHLIEIPETE
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagctgccaccagagacagtgcgtctgctttcaagttgtcaggtgattacgtct
gttgtcagtgtcgtgaaagaactagtggagaactccctggatgctgctgctacaagcgtt
gatatcaaactggagaattatgggtttgatagaatagaggtgcgggacaacggtgatggg
atcaaagctgttgatgcacctgtgatgggagtgcagcactatacatctaaaatcaccagt
catgaagaccttgaatctttacacacctatggatttcgtggtgaagccttgggatcaatt
tgtgctgtttctgaggttataatcactacaaaggctgttgatgaagaggtcagtactcag
tatactttagatgatcgtggacatgtgatctcccagaaaccttctcatcttgggcaaggt
acagttgtcactgcattgaaactcttcaagaaccttcctgtgagaaagcagttttattcc
aacaccaaaaaatgtaaggaggagataaaaaaaattcaggaccttttaatggcgtacagc
ataataaaaccagaactgagggttactcttacacataataaggcaatagtttggcaaaag
gtcaaggtgtcggatcacaaaatggccttaatgtcagtgcttggaactacaatattgagc
aacatgctgtctttccaacaccaccatgaggatccagagatttctctcaatggatttctt
cctaagccagattctgaccgctctgtgacaagtctcactaatcctgacaagagttttata
tttgttaattgcagacctgtacatcacaaagaaatattaaagctagttcgagagtactac
aacctacagtccagcaaggagtcctcacgttctcgttacccaatcttcttcttgaacatc
actatttctgcttcaactatagatgtaaacttagctcctgataaaactcagatcatgctg
cagaacaaggaagctgtattatctgctattgaaaatattttgataggactatacgggcca
ctcacagtggactccttgcaaagtggagataaccaaacagaaggtgtgtttaatgaagtt
cttaatgaaacaagatcatacaactgcaacaggataagcgatgacgatccatcattcata
ttgaagaataatgatccaaatgttcaagcagaaaggacagaaaacagttcaaaaagttgg
tcattttgcattgaaaattctgattgctgtttgggcaaaaatgtaaactcaagcaatgat
gcacctagcagcaatgtacttgaagccagatcattggattctgctaggtcctatgaggaa
ggccaaagtaataaaaacgcctgtgacataaatgtaacttttactttagatgatagttta
ttgagggacagccacacacagtgtaaccgtgaggatttcctgaaacctgggcaagtaaca
gaagttaatcaggatgttatggttgctaaggacctctttaaagtctctgctgatagctgg
agtaagggacacacaccattagattctgcaggagaaaaactagaacctgtaaaaattttg
gctccttgggaaggagaaattctggaacagaagacggatgataaaatcaagctgcaaagc
ccaggaaaaccaagtccaaagaggagcccaagtagtagagtatcaaacgtagtagctgac
aaagtgggacagatcacagcatatgacctgatcagcaatcaaattataaggaagccaatg
tcagccagtgacacatttattcaagaagctcgacccagaatcttagcggagaccccagca
gccagtgtgcaggaggtttccaagaaagttgacaaaatgtggaagaatttgagtgaagag
gagaaaaagaaatatgaagaaaaagctgccaaagacctggagcggtataacatgcagact
aagaaggctatggagcagtgtgacaacagaccaattaaaggaggagagaaaaaactccga
tctcagcagcacaagttgaaggctcccctttcaaaccagcaactgctcgacaaacttttt
cagtctcaggctgaaaagaaaagccgtcttgcccagcctgttaaaactgtgcaggttccc
tattcattaagctctttaaaacatcggcttcaacaactcgccgtaaagtgcaattcggac
aatacagggcttcaccttattggctgcctgagctcacacagcatgtggattgttgcttct
gaaagaaaacttatgttcctaaaccctcttcgggtggaagaagcactgctgtttaaaaga
ttactcgagaaacatatacttcctgcagaagcacttgacacaccaatagtcttatcagac
agtcttctcggtggcccggaatacacagattctctttgtagcatgcagaaagaaagtgca
cagctaaacggtctgacttatttttccgatcccaggcttgtagcaaatggatttaagata
agagtaataccaggcacatcagtcaaagaaaaacagctggaaatagaaggaatggccaac
tgcttgcctttttatggtgcatcagatttaagagagattttgagagccgttgtaaataaa
aacgcaaggaaggtggaggaatgcagaccccgtaaggtgataaattacctggagggagaa
gcagtccgccttggccgacagctaccactacatttttcaaaggaagatatacaagacaca
attcataggatgaagcaacaacttggaaatgaaagcaaaggatgtgttcatggacgtcca
tttttccatcacttaatagagattccagaaacagagtga
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