Latimeria chalumnae (coelacanth): 102349368
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Entry
102349368 CDS
T02913
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid type A receptor alpha6 subunit
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04080
Neuroactive ligand-receptor interaction
lcm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102349368 (GABRA6)
04082 Neuroactive ligand signaling
102349368 (GABRA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102349368 (GABRA6)
Ion channels [BR:
lcm04040
]
Ligand-gated channels
GABA-A
102349368 (GABRA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Il13Ra_Ig
ArAE_1
Motif
Other DBs
NCBI-GeneID:
102349368
NCBI-ProteinID:
XP_014344374
LinkDB
All DBs
Position
Un
AA seq
462 aa
AA seq
DB search
MSDTMGSHTFKNRVMTISEQIRIGNVLADQHTEVNIYSENITRILDRLLDGYDNRLRPGF
GGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDERLRFDGPINILRLNNLMVSRI
WTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTVLYTMRLTINADCPMRLVNFPMDGHACP
LKFGSYAYPKSEIIYTWKKGPLYSVEVPQESSSLLQYDLVGQTVSSETMKSNTGEYSLQV
VYFHLQRKLGYYVIQTYIPLTMTVVLSQVVFWINKESVPARTVAGITTVLTMTTLSISAR
HSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQAQKTMNKAARAAALAAATVA
AEEEIVLQSDSNCNLKKRINSLVTQCDPPPEANSLSTNSPHSTASCSPPSGSAQLTPSPS
SPGGTSKIDQYARILFPVAFGVFNMVYWVVYLSKDTMEMSSI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatacaatgggcagccacacatttaaaaaccgtgtgatgacaatttcagagcaa
attaggataggcaacgtcttggcagatcaacacaccgaggtaaatatctattctgaaaac
atcacacgtattttggatagactactggatggctatgacaacaggcttcgacctggattt
ggaggtcctgttaccgaagtcaaaactgacatctatgtcaccagttttggtcctgtctca
gacgttgaaatggagtacacaatggatgttttctttcgacagacctggattgatgaaagg
ctaaggtttgatggaccaattaatatcctcagattaaacaatctgatggttagtaggatt
tggactcctgacacctttttcagaaatggaaagcggtctatatcccataacatgacaact
cctaacaagctctttagaataatgcagaatgggacagtactttatactatgaggcttacc
atcaatgcagattgtcctatgagactggtaaattttccaatggatggacatgcctgtcca
ttaaagtttggaagctatgcttatcccaaaagtgaaataatttatacttggaaaaaaggc
ccattgtactctgtagaggtaccacaagagtcttcaagtttgcttcagtatgatcttgtg
gggcagacagtttcaagtgaaacaatgaagtctaacacaggagaatattcattgcaggta
gtctattttcatctacaaaggaaactaggttactatgtcattcagacttacatcccatta
accatgaccgtagtcctatcccaggttgtgttttggataaataaagaatctgtccctgca
agaactgtggctggtataactactgtgctaacgatgactactctaagtatcagtgcacgt
cattccctgcctaaagtgtcatatgctactgccatggactggttcatagctgtgtgtttc
gcctttgtcttctctgcacttatcgagtttgcagctgtcaactacttcacaaatcttcag
gcccaaaagacaatgaacaaggcagcgagggcagcagcattagcagcagcaactgtggca
gcagaagaggagattgtcttgcaatcggattccaactgtaacctgaaaaaaagaataaac
tccttggttactcagtgcgatccacccccagaagctaacagtctgtccactaattcacct
cacagtactgcaagctgtagccctccgtcaggttctgcccagttaaccccttccccttca
tcccctggtggcaccagcaaaatagatcagtatgcaaggattctctttccagtagcattt
ggagtattcaacatggtatactgggttgtctatctttcgaaagatacaatggagatgagt
agtatttga
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