Latimeria chalumnae (coelacanth): 102349424
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Entry
102349424 CDS
T02913
Symbol
TRPC4
Name
(RefSeq) transient receptor potential cation channel subfamily C member 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102349424 (TRPC4)
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102349424 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
102349424
NCBI-ProteinID:
XP_006012787
Ensembl:
ENSLACG00000001872
LinkDB
All DBs
Position
Un
AA seq
739 aa
AA seq
DB search
MAQLYYKRADNAPYRDRISLRIVRAESELSPAEKAYLNAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKHLVQKGVSIPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDNNSLLEDQNTNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRKHWAVKFFTCVFIGLLFPVLSLSYLIAPKSTLGLFIR
KPFIKFICHTASYLTFLFLLLLASQRIVRTDLDMQGPTPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAYVKYNGSRQREQWEMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETTAEELNGCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKARHEFTEFVGA
TMFGTYNIISLVVLLNMLIAMMNNSYQLIVDHADIEWKFARTKLWMSYFEEGGTLPTPFN
IIPSPKSTWYLLNWIKRHVCKKKERRKPESFGTIGRRAADNVRKNHQYQEVMRNLVKRYV
AAMIRDAKTEEGLTEENFK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactctattacaaaagagctgataatgctccttacagagaccgcatttccctt
cgtatagtgcgagcagagtcggaactctcacctgcagagaaggcttacttaaatgcagtg
gaaaagggggactatgccagtgtcaagcaagctctggaagaagctgagatttactttaaa
atcaacattaactgcattgacccccttgggagaactgcacttctcatagcaattgaaaat
gaaaaccttgaaatcattgagctcctgttaagtttcaatgtatatgttggagatgctctt
ctgcatgccattcgaaaagaggtagtgggagcagttgaactgttattaaatcataagaaa
cccagtggagaaaaacaggttccaccaatactcttagataagcagttctcagaatttact
cctgatattacaccaataattttagctgcacacacaaacaattacgagatcataaagcat
cttgtgcagaagggagtttccataccaagaccacatgaagtgcgctgtaactgtgttgaa
tgtgtttcaagctctgatgtggatagtttgcgccattcccgctcaaggttaaacatctac
aaagctttgtcaagcccatcattgatagcgctatcgagtgaagaccccttccttacagca
tttcaacttagctgggagcttcaggagctaagcaaagtggaaaacgagtttaaatcagag
tatgaggagctctcacggcaatgtaaacaatttgcaaaagacctcttagatcagacaagg
agttccagagaattagaaattatccttaactacagagataataatagtctgttggaggac
caaaacactaatgatcttgcaagactaaaattggcaattaaatatcatcagaaagagttt
gttgctcaaccaaactgccagcaacttcttgcctctcggtggtatgacgaatttcccggc
tggaggagaaagcattgggcagtgaagtttttcacatgtgtcttcattggattgttgttt
ccggtactttctttatcctacctgatagctccaaaaagcacattgggactattcatcaga
aagccgtttatcaaatttatctgccataccgcttcatatttgactttcctgtttctactg
ctacttgcatctcagcgtattgttaggacagacttagacatgcaaggtcctacaccaacc
attgttgagtggatgatcctaccatgggtcttaggttttatttggggtgaaataaaacag
atgtgggatggtgggcttcaagattacatacatgactggtggaacctaatggactttgtc
atgaattctttatacttagcaacaatctctttaaaaattgttgcatatgtaaagtacaat
gggtcacgccagcgagaacagtgggaaatgtggcatcccaccttggtggctgaggcatta
tttgctatagcaaatatcttcagttcgcttcgacttatctcactttttactgctaattct
catttggggcctctgcaaatatctctcggaagaatgttgttggacattttaaagtttctc
ttcatatattgcctggtgctgttagcctttgcaaatggcttgaaccagctgtatttttac
tacgagaccactgcagaagagctgaatggctgtaaagggatacgatgtgaaaagcaaaat
aatgcattttccacgctctttgaaactctacaatcattgttctggtctatatttgggctg
attaatctgtatgtgacaaacgttaaagctcgtcatgagtttactgagtttgtgggagcc
acgatgtttggaacctacaatatcatctcccttgtggttctgctcaacatgttgatagcc
atgatgaataactcctaccaactcattgttgaccatgcagatattgagtggaagtttgca
agaacaaagctgtggatgagttattttgaagaaggaggtactctaccaactccattcaac
attatcccaagccccaagtcaacttggtatctgcttaattggataaagaggcatgtgtgc
aagaaaaaggaacgaaggaagcctgaaagttttggaacaatagggagacgtgccgccgac
aacgtgaggaaaaatcatcaataccaggaggtgatgagaaatctagttaaaagatatgtc
gctgcaatgatcagggatgcaaagaccgaagaaggacttacagaggaaaattttaag
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