Latimeria chalumnae (coelacanth): 102349456
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Entry
102349456 CDS
T02913
Symbol
CACNA1H
Name
(RefSeq) calcium voltage-gated channel subunit alpha1 H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04010
MAPK signaling pathway
lcm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102349456 (CACNA1H)
04020 Calcium signaling pathway
102349456 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102349456 (CACNA1H)
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102349456 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102349456
NCBI-ProteinID:
XP_014345599
LinkDB
All DBs
Position
Un
AA seq
2423 aa
AA seq
DB search
MTDGKRREQVHPLGSDEVRVPIAGSGRSPNRAREPREEEDGGSAGKSVLGSLGSAGSSAR
DRAQELGSEEEEQVPYPALAPVVVFCLKQTTRPRSWCLKLVCNPWFEHVSMLVILLNCVT
LGMFQPCEDVECRSERCTILEAFDDFIFAFFAVEMIIKMVALGIFGQKCYLGDTWNRLDF
FIVMAGMLEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLL
CFFVFFIFGIVGVQLWAGLLRNRCFLEDNFAVYHNISFLRPYYQADEGEEIPFICSSNRD
NGMVKCQDIPVSKENGMECSRSTDYYSHPQYSMDMDSRNSCINWNQYYNVCKTGEKNPHN
GAINFDNIGYAWIAIFQVGSFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTI
ASFSEPGSCYEELIKYICHIFRKVKRRILRLYTNWQNKRRKKVNPNSSMNGQGRGRRSKR
SLRSIHHLIHHHHHHHHHHYHISNGSPRGLRGSPEICDLEMKIIRPGGQLMLPSPSSNLH
SPPPGTESVHSIYHADCHFEGPQVKCKSSNPTANLKLLTELGHHAGMNYPTIMPSVATRT
SSTPKSKGKKSSSTPIRLSRGSANLNTDPYEKLHHFVGEYGICQAPSRLSGISMPCSVPS
AQPSLLTCELQNCPYCVSALENPDFELSDSDSGESNPNGVYEFTQDLRRGDQRDQMKQKG
KKKKPKERNKLTIFWGVFCDKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPKELTDA
LEISNIVFTSMFALEMLLKLLAFGLFGYIKNPYNIFDGIIVIISVWEIIGQSDGGLSVLR
TFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFCLK
TETGDTIPDRKNFDSLLWAIVTVFQILTQEDWNAVLYNGMASTSSWAALYFVALMTFGNY
VLFNLLVAILVEGFQAEGDANRSESDEDKTSANFDDDFDKFKDPHSPEMKMYSLAMTPNG
HLDSRGSLPPPIILRTAATPMPTPKISPYMDSVHSFADSRRGSSASIDPTNYDQKSLSSI
RSSPCVPWSTNSNWGSRRSSWNSLGRASSLKRKNQSGERESLLSGEGKGSSEEDDLDDGK
SSKTGSISGSLHHRAESLDTKGSLDLPELLQVPSIRHPLGVSQLTMSPIDYQDCNGKMMH
VPNEFFLRMDNYKDDITDYEDDIDDSYCFRIRKMLEPYKPEWCKAHEDWSLYLFSPQNRF
RTMCQKVIAHKMFDHVVLVFIFLNCITIALERPEIDQNSTERMFLTVSNYIFTAIFVAEM
TVKVVALGFCSGENTYLQSSWNVLDGVLVFVSIIDIIVSLASAGGAKILGILRVLRLLRT
LRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQVNNSLLATAHRSG
YFQSIRSYEENKIVYPNYKEELEIIHPTRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVE
NFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRRPYYADYSPTRLYIHTLCTSHYLDLF
ITFIIGINVVTMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWN
QLDLAIVLLSIMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRSLLDTV
VQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNEDNPCEGLSRHATFENFGMAFLTLF
RVSTGDNWNGIMKDTLRECSSDDKNCLSYLPLISPIYFVTFVLIAQFVLVNVVVAVLMKH
LEESNKEAKEEAEMDAEIELEMSRGLSSSASSGGRTPGLDSRITYIGPETLKAESPVRGK
QSVGEAACDNVLLGIQDSLEGDYLMKTNISDLTPHHHAMPSITKYLDGKQEEEAMYGRVM
RDNLLAVKKVSVSRMHSLPNDSYMFRPVKPAKAPYPLPEDEPYDDKSQTGSMTSVQSQPL
ESTSFLQVPAKSFQPNPAAFHHDNSNPPKIPPPFIAPRSPSMNRLLRRQEAIRTDSLEGD
SRDSLQAQSSDSLHLKLPSQNVLHSPILRPTPLTLQVTPQPSPSFSPGNRHPSVHTLKQV
YSQHSIPSRPPSHNSICAGSSMVDSVDPADEEVSHINSSVRDWGGHLDLRSHSLSPFVSP
VGSLATLKNCTSTTSLTGANSKDKDLKKFYSVDAQGFLAKPSWATDARRHSIEICPSIDD
GDLSFDLSIDEKQKSIDCLQSEPESMLGTQRKKKMSPPCISIEPPLEIENATASFSKASN
NNSMMLRRRTPSFESTAYRDSLDLLDTQPGEQSSKADRRIAPPCRNEHLAVPNFSFEQSD
VSSLSSLSDLLSDSEQSTPSSSVSMDCRPDMVALEPKKMDHMKIQYENAEQSKDLLNVTR
SPLRKHGLVRMASTRDEDTNDPV
NT seq
7272 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcaagagacgagagcaggtccacccgctggggagcgatgaggtccgtgtc
ccgatcgcaggttcaggacgatcccccaaccgggcacgcgagccccgcgaggaggaggac
gggggcagcgccggcaagtcggtcttggggagcctgggctcagcaggctcctcagcccgg
gatcgggctcaggagttgggatccgaagaggaggagcaggttccgtacccggccctagcg
cccgtggtggtgttctgtctcaaacagactacgcgccctcgcagctggtgcctcaaactg
gtttgtaatccctggtttgagcatgtcagcatgcttgtcatcctgttaaactgtgtcacc
ctggggatgttccagccctgtgaagatgtggagtgccggtcagagagatgtaccatacta
gaggcatttgatgacttcatttttgcattctttgctgtggagatgatcatcaagatggta
gcactagggatatttggacagaagtgttaccttggagacacatggaaccgtctggatttt
ttcattgtaatggcagggatgttggaatattctctggatggacacaatgtcagtttatct
gcgatccgtactgtccgagttctcaggccactaagagccattaacagggttcctagtatg
aggatcctagtgaccctgcttttagatactttgcctatgttaggcaacgtccttctcctg
tgtttttttgtcttctttatttttggaattgttggtgtgcaactgtgggcgggactgcta
aggaacaggtgcttcctggaggataactttgcagtgtaccacaacatttcttttttacgt
ccatattatcaggcagatgaaggggaagaaattccattcatctgctcttccaatcgggac
aatggtatggttaagtgccaggacatccctgtgtcaaaggaaaatggaatggagtgttcc
cggagcacagactactacagccacccccagtacagtatggacatggacagcagaaacagc
tgcatcaattggaaccaatattacaatgtttgcaagacgggggaaaaaaacccgcacaat
ggagctattaactttgataatattgggtatgcatggatagcaatttttcaggttggttca
ttcttcatgattaacttgtgcctggttgtgatagcaacacagttttcagaaacaaaacag
cgggaaaaccagctgatgcaggagcagcgtgcccgttacctttcaaatgatagcacaata
gccagcttctcagagccaggcagctgttatgaggagctcatcaagtacatctgccacatc
ttcagaaaagtgaaacggcggattttgcgcctctacaccaactggcagaacaaacggagg
aagaaagtcaaccccaacagctccatgaatgggcaaggccgaggccgcaggagcaaaaga
agccttaggtcaattcatcatttaatacatcatcaccatcaccatcaccaccaccattac
cacattagtaatgggagccccaggggactgaggggaagccccgagatctgtgacctggaa
atgaaaatcataaggcctggaggtcagttaatgcttccatctccatcatcgaaccttcac
agccctcctccaggcactgagtcggtccatagcatctaccatgcagattgtcactttgaa
gggccacaggtcaaatgcaagtcttccaatccaacagccaatcttaagctgcttaccgaa
cttgggcatcacgccggcatgaactacccgacgataatgccatctgtggcaacaaggacc
agctccacaccaaaatctaagggcaagaaaagcagcagcactcctattagattgagcagg
gggtctgctaatttaaacactgacccctatgaaaagctgcatcattttgtgggggagtat
ggcatctgccaagcacctagcagactgtctggtattagcatgccatgttctgtgccgagt
gctcagcctagcctgctgacatgtgaactccaaaactgtccctattgtgtgagtgctttg
gagaacccagacttcgagctgagtgactcagacagtggggaatcaaatccaaatggtgtc
tatgaatttacccaagacctgagacgtggagaccaaagagaccagatgaaacagaagggg
aaaaagaagaaaccaaaggaaaggaataaactcaccatattctggggggtcttttgtgac
aagctgaaaaggattgtggaaagtaaatattttaaccgtggaataatgatagctatcctg
atcaacacactgagtatggggattgagtaccatgagcagcctaaggagctgaccgacgct
ctggagatcagtaacattgtcttcaccagcatgtttgcccttgagatgctcctcaagctc
cttgcatttgggctttttggctacattaagaatccttacaacatatttgatgggatcatt
gtcatcatcagtgtgtgggaaatcattggccaatctgatggaggtctgtctgtgctaaga
actttccgactactcagggtcctaaagctggtgcgctttatgcctgccttacggcgccaa
cttgtggtcctgatgaagaccatggacaatgttgctaccttctgcatgcttcttatgctc
tttatattcatcttcagcattctaggcatgcacctttttggatgtaaattctgcttgaag
actgagactggagacaccatcccagacaggaaaaactttgactccttgctgtgggcgatt
gtcactgtctttcagatccttacccaagaggactggaatgcagttctctataatggaatg
gcctccacctcctcctgggctgccctctactttgtggccttgatgacttttggcaattac
gtgctttttaaccttttggtagccatcctggttgaaggatttcaagctgagggggatgcg
aaccgatctgaatcagatgaagataagacatcagctaactttgatgatgactttgacaag
ttcaaggacccacattcaccagaaatgaaaatgtattcccttgccatgacaccaaatggg
cacctggactctaggggaagcctgccaccaccaatcattctacgcactgctgccactccc
atgcccacaccaaagatctctccttacatggactcagttcactcctttgcagattcaaga
cgaggcagcagtgcctccattgatcccacaaactatgatcagaagtctttgtctagcatc
cgcagttcaccctgtgttccttggagtaccaatagcaactggggaagccgacgatcaagt
tggaacagcctggggagagcatcgagccttaagagaaagaatcagtcaggagaacgggaa
tctttactctctggtgaaggaaaaggcagttcagaagaagatgacttagatgatggaaag
tccagcaaaactggtagcattagtggatccttgcaccatcgggcagaatctctggatacc
aaagggtccttagaccttcctgaattgctccaggttcccagcatacgccaccctcttgga
gtcagtcagttaacaatgtcacccatagactatcaggactgcaatggtaaaatgatgcat
gtccccaatgaattctttctacgaatggacaattataaagatgatatcactgactacgag
gatgacatagatgatagttactgctttaggattcggaaaatgttggagccatacaagcca
gagtggtgtaaagctcatgaggattggtctctctacttgttttctccacagaaccggttc
cgcacaatgtgccagaaggtcattgcacacaagatgtttgatcatgtggttttagttttc
attttcctgaactgcatcaccatcgccctggagaggcctgagattgatcagaacagcact
gagcggatgtttttgacagtctcaaattacatctttactgcaatttttgttgcggaaatg
actgtgaaggttgtggccctgggtttttgctctggtgaaaacacttatctccaaagcagc
tggaatgtcctggatggtgtcctggtcttcgtgtctatcatagacatcattgtttcttta
gcctctgctggaggagcaaagattcttggcatccttcgagttctaaggttattaagaacc
ctgcgaccactgagggttataagccgagctccaggcctaaagctagtggtggaaacctta
atatcctccctgaggcccatcgggaatatcgtgcttatctgctgtgctttcttcattatc
tttggaatcctgggggtgcaggtaaacaactcgttattagcaacagctcacagatcagga
tattttcagagtatcaggtcttatgaagaaaataaaattgtctatccaaattataaagaa
gaattggagatcattcatcctacccgaaatcacaacccctggatgctcctatatttcatc
tccttcctactcatcgtcagtttcttcgtgctcaacatgtttgtgggtgtggtggtggag
aacttccacaaatgccggcagcaccaggaggctgaagaggctcgccgccgtgaggagaag
cgccttcggcgtttggagaaaaagcgcaggaaagcccaacgccgaccctactatgcggat
tactcccctacccggctctacattcacacattgtgcaccagtcactatctggaccttttc
ataacatttatcattgggatcaatgtggtcaccatgtccatggagcactacaaccagcca
aagtccctggatgaagctctgaagtattgcaactatgtgttcaccatcgtctttgtgttt
gaagcagttttgaagctggtagcctttggcttcagaagattcttcaaagacagatggaat
cagcttgaccttgctatagtgctgctctcaataatgggaattactcttgaagaaattgaa
atcaacgcctcactcccaataaatccaaccattattcgcatcatgagagtactgcgaatt
gcaagagttctgaaactgctgaaaatggccacagggatgagatcattactggatactgta
gtgcaggccttgcctcaagtgggaaaccttggcctccttttcatgcttttgtttttcatc
tatgctgccctgggagtggagctttttggaaaacttgtttgcaatgaggataatccatgt
gaaggattaagcagacatgcaacttttgagaactttggaatggccttcctgacattattc
agagtgtccactggcgataactggaatggaataatgaaggacacactccgtgaatgcagt
agcgatgataagaattgccttagctaccttcccttaatctcccccatttattttgtcacc
tttgtgctgattgcccagtttgtacttgttaacgtggtggtggcagtcctgatgaagcac
ctggaggagagcaacaaggaggctaaagaggaggcagagatggatgcagagattgagttg
gagatgtcacggggtcttagctcctcagccagcagtggtggccgcacccctggcttggac
agcaggataacctacatagggccagagaccttgaaggcagaatcgcctgtgcgagggaaa
cagagtgtgggggaagcggcctgcgataatgtgttgctgggaatccaggactcactggaa
ggagactatctcatgaagactaacatttcagacctcaccccccaccatcatgccatgcca
tccatcacaaaatacctcgacggcaagcaagaggaagaagctatgtatggcagagtcatg
agagataacctacttgctgttaagaaagtctctgtctccagaatgcattctctgcccaat
gacagctatatgttccgcccagtgaaaccagccaaagctccctaccctctccctgaagat
gaaccttatgatgacaagtcacaaacagggtcaatgacatcagttcagtcccagcctctg
gaatccacctcatttcttcaagttcctgctaagtcatttcagcctaaccctgctgctttt
catcatgataacagcaatcctcccaagatccctcccccgttcatagcaccaaggtctccc
agtatgaacagactgctgcgcagacaggaagctatcagaacagactctttggaaggggac
tccagggacagtcttcaagcacaatccagtgacagtctacatttaaagttaccatcccaa
aatgtattacactctcccatactccgccccacaccacttactctacaagtcacacctcag
ccttcacccagtttttcaccaggcaacaggcatccaagtgtccacactctcaagcaagta
tacagccaacacagtattccaagcaggcctccaagtcacaacagcatttgtgctggaagc
tctatggttgattcagtagatccggcagatgaagaagtcagtcatataaatagctcagta
agggactggggaggacatttagatttgagaagccactctttgtctccttttgtttcacca
gtaggttcacttgctactttgaagaactgcacaagtacaaccagcctcactggggccaac
agcaaagataaagacctgaaaaagttctatagcgtggatgcccaaggattcttggccaag
ccctcatgggcaactgatgcaaggaggcattctattgaaatatgtccatctattgatgat
ggagacttgagctttgatctgtccattgatgaaaagcaaaagtctattgactgccttcag
tcggagccagaaagcatgcttggtactcaaagaaagaaaaagatgagcccaccttgtatt
tcaatagagcctcctttggagattgagaatgcaactgcttctttctcaaaagcatctaat
aataatagtatgatgttgcgtagaaggacaccatcttttgagtctacagcctacagagat
tcattggacctcttagatactcagcctggagagcagtcttcgaaagctgatcgaaggata
gcaccaccttgtcgaaatgaacaccttgctgttccaaatttctcctttgaacaatcagat
gtgagctcgttgagtagcctctcagaccttttgtctgacagtgaacaatcaactccttca
tcttcagtctccatggactgtagacctgatatggtggccttggaacctaaaaaaatggat
catatgaagattcagtatgagaatgcagaacaaagtaaggatttattaaatgtgaccagg
agccccctaagaaagcatggattggtccgtatggctagcacaagagatgaagacacaaat
gacccagtatag
DBGET
integrated database retrieval system
