Latimeria chalumnae (coelacanth): 102349528
Help
Entry
102349528 CDS
T02913
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat domain 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcm03037
]
102349528 (TTC28)
Cilium and associated proteins [BR:
lcm03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
102349528 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_14
TPR_16
RPN7
Rapsyn_N
TPR_9
TPR_11
TPR_17
TPR_19
TPR_NPHP3
TPR_6
PUB
ANAPC5
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
102349528
NCBI-ProteinID:
XP_005990307
Ensembl:
ENSLACG00000011965
LinkDB
All DBs
Position
Un
AA seq
2422 aa
AA seq
DB search
MLSKAEFIEKVRHSNQACQNGDFHTAIELYTEALGADPQNCILYSNRSAAFMKIQAYDKA
LDDAIKARILNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAM
KSPMRESLEPTYQQLQKMKLDKSPFVVVSVIGQELLTASHHGASVVVLEAALKIGTCSLK
LRGSVFSALSSAYWSLGNTEKSIGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYR
EALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDEL
SEARELGNMGAVYIAMGDFENAVQCHEQHLKIAKELGNKREEARAYSNLGSAYHYRRNFD
KAMSYHNHVLELAQELEEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAENLKDRA
AEGRASSNLGIIHQMKGDYDTALKLHKTHLSIAQELNDYAAQGRAYGNMGNAYNALGMYD
QAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALRAHDRALQHYQNHLNIARELRDIQ
SEARALSNLGNFHCSRGEYLQAVPYYEQYLRLSPDLQDMEGEGKVCHNLGYAHYCLGNYQ
EAVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALGNYNKAEECQKYLLSLAQSLTNSQ
AKFRALGNLGDIFVCKKDISGAIKFYEQQLSLAHQVKDRKLEASAYAALGAAYRMIQKYD
KALGYHTQELEVYQELSDIRGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDPS
IEAQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQLNGNESVLDRGRAYGNLGDCYDALG
DYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELG
EASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIAREMKDRILESDAACGLGAVYQQMA
EYETALQYHQLDLQIAEETNNPTCQGRAYGNLGLTYESLGNFERAVVYQEQHLSIAAQMN
DLVAKTVAYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHRLGLSLWASG
NLEEAQHQLYRASALFETIRHEAQLSTDYKLSLFDLQTSLYQALQRVLVSLGHHDEALAV
AERGRTRAFADLLVERQTGQQDSDPYTPVTIDQILETVNSQRGLVLYYSLAAGYLYSWLL
APGAGILKFHEYYLGDGMAENTGDFHETSSVNFQATCNSTLEQYIANVREALGVDSYYTS
RACSNSETESDAGDLLEQQFEEMNNKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNT
MSPAKENTSSLPRRHSSQSKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELY
LIPFALLKGSSSNEYLYERFSLIAVPSIRALSASSKSHLRKNVTAFSGSTSMAAVIGNPK
LPSAVMDRWLWGPMPSAEEEAYMVSELLGCQPLAGAVATKERVMSAVSQAECVHFATHIS
WKLAALVLTPNSDGSSSSGKSSFGNSYTIPESLRMQDDASDVESIADSPPLQEFLLTAAD
ILDLRLPAKLVVLGSYQESNSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKMFVH
AFYSSLLNGMKTSAALGEAMKIVQSSKQFSHPSNWAGFMLIGSDVKMNSPSSLIGQALTE
ILQHPERVRDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGF
RLDPAASGLPAAVFFPTSDPGDRLQQCSTTLQSLLGLPHPALQALCKLITASETGEQLIS
RLHQVLVQLQSGEKEHDFASTPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKT
GKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSISNPMPLGYQNPPFS
PTCPDSLASDAISVYSLSSIASSMSFVSKSENTSEGIGHRARQDYERPKNIYSHKTSVPR
SRSSPQTNVGSGKEEEEYEGYSIISNEPLGTYSDTQKMPLSPEHKQTKLGSSGGAKSSMS
VKGSLSTPSSPVKMTLIPSPNSPFQKVGKLTGSDTGESDQSSTETDSTVKSQEDKAPKLD
PQELAQKILEETQSHLIAVERLQRSGSQVGKNNESSDGASTPTGGSTFRSSETSAFSRPL
SCSQKNQPSPVTVKPKPPTRSSSLQKISSGYNSPTTSELSNKEASSGQPSPTVDSHGLLT
EQPHFKLKYPSSPYSAHISRSPRNMSPSSGHQSPAESSPSPALSYSSAGSARSSPADAPD
LDKLKMAAIDEKVQAIHNLKMFWTSTPQHSSGPMRALRGHPSTFASKRDVLNLLNLSPRH
SKKEEHADKLELKELSIQQELASPQKNPPNGHNRHPEANKVTASSRPASTSSSPGGIRSL
RLPSGNGYKFLSTGRFFPSSKC
NT seq
7269 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtaaggctgagtttattgaaaaggtgcgtcacagtaaccaggcgtgtcaaaat
ggagatttccacacagccatcgagttatacacagaagcactgggggctgaccctcagaac
tgtattctgtacagcaacaggtctgcggcgttcatgaaaatccaagcatatgacaaggcg
ctggatgatgctattaaagcacggatcctaaatcccaagtggccaaaggcatacttccga
cagggtgttgcccttcagtacctcggacgccatgcagacgcgctggcagcgtttgcctca
ggactggcccaagatcccaagagtctacagttactggttgggatggtggaggccgccatg
aagtcccccatgagagaatcactggagccaacatatcagcagctccagaagatgaaactg
gacaagagtccctttgtggtggtgtcagtgattggccaggagctgttgacggccagtcat
cacggtgcctctgtggttgtcctggaagctgcactgaagattggaacatgcagtctgaaa
ctgagaggatctgttttctccgccttgagcagtgcttactggtcactagggaacacagag
aagagtattggatacatgcagcaggacttggatgtagccaaaactttaggtgaccagacg
ggtgaatgccgagcccatggtaatctaggctctgcattcttctccaaaggaaactatcgg
gaggccctgaccaaccatcgacatcaactggtgcttgcaatgaagctaaaggacagagag
gcagcctcttctgctttgagcagcctgggccatgtctacactgccattggagactatcca
aatgcgctggccagtcataagcagtgtgtccttttggctaaacaatccaaagatgaactt
tctgaggctagagagctaggcaacatgggagctgtttacattgccatgggggattttgaa
aatgcagttcagtgtcatgagcagcaccttaagattgcaaaagagctgggaaataagcga
gaagaagcccgggcctacagcaatctaggcagtgcctaccactacaggaggaactttgac
aaggccatgtcctaccataaccatgtgctagagctggcccaggagctggaggaaaaggcc
attgagatgcgggcctatgcgggtctgggacatgcagcacggtgcatgcaggacttggaa
cgggctaagcagtaccatgaacagcaactgggcattgcagagaacctaaaggacagagca
gctgaaggcagagcctcctcaaacctcggtataatccaccagatgaaaggtgattatgat
actgcactgaaacttcacaaaactcatctctctattgctcaagaactaaatgattatgca
gcccagggaagggcctatgggaacatgggaaatgcctacaatgctctgggtatgtatgac
caagctgttaaataccatcgacaggaacttcagatatccatggaagtcaatgaccgagct
tctcaagcctctacacatggtaatttagctgtggcctaccaggcattgcgagcacatgat
agagccttgcaacactaccagaaccaccttaacattgccagagagctacgggatatccag
agtgaggctcgggcacttagtaatttaggaaacttccactgctcaaggggagaatattta
caggctgtaccatactatgagcagtacttgcgattgtctcctgatctacaggatatggag
ggtgaaggaaaagtttgccataaccttggctatgcccattactgccttggaaactatcaa
gaggctgtaaaatactatgaacaagatctagccttagctaaggacttgcatgacaaacta
agccaggccaaggcctattgtaacctgggcctagcctttaaggctcttgggaactacaac
aaggctgaagaatgtcagaagtatctgctttccttggcccagtctttgactaattcccaa
gccaaatttcgagcattaggaaaccttggtgacatctttgtttgtaaaaaggatatcagt
ggtgcaataaagttttatgaacagcagttgagtctagcccatcaagtcaaagatcggaaa
ttagaagctagtgcttatgcagctttgggagctgcatacaggatgatacaaaaatatgac
aaagctttgggataccacacacaggagcttgaggtctatcaagaattgagtgacatacgt
ggtgaatgtagagctcatggtcatcttgctgcagtatacatgtccctaggaaaatataca
atggcatttaagtgttatgaagagcagttggaacttgggcagaagctgaaagatcccagt
attgaagctcaggtgtatggtaacatgggcattaccaagatgaacatgaatgtaatggag
gaagccattggttactttgaacagcaactagcaatgctgcagcagttgaatgggaatgag
tctgtgctggacagaggacgggcttatggaaatctaggtgactgctatgatgcattaggg
gattatgaagaagctataaaatattatgaacagtacttatcagtggcccagagtttgaat
cgcatgcaggatcaagcaaaggcgtaccgaggtcttggaaatggacatagggctatggga
aatctccaacaatctcttgtgtgttttgaaaagaggctggtggtggctcatgaacttgga
gaagcctcaaacaaggcccaggcctatggggagcttggtagcctccatagccagttgggt
aactatgagcaggccatatcctgcctggaacgtcaactgaacattgcaagagaaatgaag
gaccggatattggagagtgatgcagcttgtggactgggggcagtataccaacaaatggca
gagtatgagacagcactacagtatcatcaacttgacttacagatagcagaagaaaccaat
aatcctacttgccagggccgggcctatggaaatctgggattaacctatgaatctcttggt
aattttgagcgtgctgtggtatatcaagaacaacatcttagcattgctgcccagatgaat
gacttggtagctaaaactgtggcatacagtagtctgggcaggacacatcatgccttgcag
aattattctcaagctgtcatgtacttacaggaaggtttgaggctagcagaacaattaggc
agaagagaagatgaggctaaaatcagacaccggctgggactctcgttgtgggctagtgga
aacttagaagaagcccagcaccagctttacagagcatcggccctgtttgaaacaatccgc
cacgaagcccagctcagcacagactacaaactctccctctttgatctgcagacttcattg
tatcaggcccttcagcgtgtgctggttagccttggtcatcatgatgaagcactggcagtt
gctgagcgagggagaacgagagcatttgcagacctcttggtggaacgtcagacaggacag
caggattcggatccttacaccccagtgactattgatcagattttggagacggtcaacagt
cagcgtggattggtgctgtactactcactggccgctggctacctttacagctggctattg
gcccctggagcagggattctgaagtttcatgaatattacttgggggatggcatggcagag
aacactggggactttcatgaaaccagcagtgttaactttcaggctacatgtaattcaaca
ctggaacagtacattgcaaatgtccgtgaagccctaggggtggactcctactacaccagc
agagcttgttctaacagtgagactgagagtgacgctggggatctcctggagcagcagttt
gaggaaatgaacaacaaactgaactcggttacggaccctactggctttttgagaatggtc
agcaggaacaacctctttaatcgaagctgtcagagcatgaccagcttgttcagtaacact
atgtcaccagccaaggaaaacacctcctctcttccccgaaggcacagctctcagagcaag
ccccctctccgtgccctctatgacttactgattgcgcccatggaagggggtttaatgcat
tccagcggtcccgtgggaagacacaggcagttggtgttggtactggagggagaactttac
ctcataccctttgctcttctgaaaggaagttcttccaatgagtacctttatgaacgtttc
agcctgattgctgttccttcaatcagagctctcagtgccagctctaagtctcacttgaga
aaaaatgttacggccttctctggctctacctcgatggcggctgtcataggaaacccgaag
ctcccgtcggcagtgatggaccgatggctgtgggggccgatgccttctgctgaagaagaa
gcctatatggtgtctgaacttctcgggtgtcaacctctggctggtgccgtggcaaccaag
gagagagtcatgagtgcagtcagtcaggcagagtgtgtccattttgcgacccacatctca
tggaagctggcggctttggttttaacacccaacagtgatggcagctcaagcagcggcaaa
agctcctttggaaacagttacacaatcccagagtcccttcgaatgcaagatgatgcaagt
gatgtggaaagtatcgccgacagccctcccctccaggagttcctgctgacagctgcagac
attttggacctgcgacttcctgctaagttagttgttttgggatcctaccaggagtccaac
agcaaagtgacagccgatggtgttgttggcctgacacgggccttcctggcggctggggca
caatgtgtcctggtgtccctctggcctgtacctgtggcagcatccaaaatgtttgtccac
gccttttactcctcacttctcaatgggatgaaaaccagtgcggctcttggggaggcaatg
aaaattgttcaaagcagcaagcaattttcccatccatccaactgggcaggtttcatgctg
attggaagtgatgtgaaaatgaacagcccctcatcacttattggacaagccctcacagag
atcctccaacacccagagcgtgtccgagatgccctgcgtgtgctcttacatctggtggag
aaatcactgcagcggatccagaatggtcagcgcaattccatgtacacctcccagcagagt
gtggagaataaagtcggaggagttccaggctggcaggcacttctgacagcagtaggattc
cgacttgacccagcggccagtggtctaccagctgcagttttcttcccaacctcggatcct
ggggaccgactgcagcagtgcagtaccacgcttcagtccctgttaggtttgccccaccct
gcacttcaggcactttgtaaacttattactgcttcagaaactggagagcaactcataagc
cggctccatcaggtgttggttcagctgcagtccggagagaaagaacatgacttcgcatcc
accccaatccaggtttccatcagtgtgcagctctggcgcttaccaggatgtcatgagttt
ttggcagctttgggatttgacctttgtgaagttggccaagaggaagtggtactgaaaact
ggtaaacaagctaaccggaggaccatgcactttgcattacagtcactcttggctctcttt
gattctacagagctgcctaagcgtctcagccttgatagttcttcatctctggaatctttg
gcttctgcacagtctatctccaatccaatgcctttgggatatcaaaatccaccattttct
ccaacctgtcctgatagcttggcttctgatgccatttctgtctatagcctaagctccatt
gcatcttctatgagctttgtctccaagtcagagaacacttcagaaggaattggtcacaga
gctcgccaggattatgaaaggcctaaaaatatttactctcacaaaacctcagtaccacga
agcagatcttcaccacaaactaatgttggatcaggcaaagaagaagaagaatatgagggg
tattcgatcattagtaatgaaccactaggaacttactctgatactcagaaaatgcctttg
tcacctgaacacaaacagaccaaacttggctcttctggaggagctaaatcttcaatgagt
gttaaaggtagcttgagtactccaagttcaccagttaaaatgactttaattcccagtcca
aactcacctttccagaaagtaggcaagctgacaggatcagatactggagagtcggatcag
tccagcacagaaacagatagcacagtcaaatcccaagaggacaaagcaccaaagcttgat
cctcaggagcttgcacaaaagattttggaagagactcaaagtcaccttatagctgttgag
cgcctgcagagaagtggaagtcaggtgggcaagaataatgaatccagtgatggtgcttca
actcctactggtggttctacttttagatcttcagaaaccagtgcatttagtagaccactt
agctgtagccagaaaaatcagccatctccagtaacagtaaaaccaaagcccccaactagg
agctcatctcttcagaagataagctcaggatataacagccctaccacttctgagttatct
aacaaagaagcttcaagtggtcagccatcaccaactgttgactcccatggcttacttact
gaacagcctcactttaagttaaagtacccaagttctccatacagtgcccatatttctaga
tctcccagaaacatgtctccaagttcaggccaccagtctcctgctgaaagttctccttct
ccagcattgtcttactcttctgctggttctgcacgttctagcccagctgatgcgccagac
ctagacaagttaaaaatggctgccattgatgaaaaagtccaagctatacacaatttgaag
atgttttggaccagtacaccacaacattcttcaggaccaatgagagcattgcgtgggcac
cccagtacattcgcttcaaagagagatgtccttaatttattgaacctatcaccacgccac
agcaagaaagaagaacatgcggacaagcttgagcttaaagaactgtctattcagcaggaa
cttgcttcacctcaaaagaatcctccaaatgggcataataggcaccctgaagctaacaag
gtaacagcttcatctcgccctgcatcaacaagtagcagtccaggagggatacgttcttta
agattaccatctggcaacggatacaaattcctttcaacgggaagattctttccatcttct
aagtgctga
DBGET
integrated database retrieval system
