Latimeria chalumnae (coelacanth): 102349558
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Entry
102349558 CDS
T02913
Symbol
SREBF1
Name
(RefSeq) sterol regulatory element binding transcription factor 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
102349558 (SREBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102349558 (SREBF1)
04131 Membrane trafficking [BR:
lcm04131
]
102349558 (SREBF1)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
102349558 (SREBF1)
Membrane trafficking [BR:
lcm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
102349558 (SREBF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
102349558 (SREBF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
102349558
NCBI-ProteinID:
XP_014344252
LinkDB
All DBs
Position
Un
AA seq
1129 aa
AA seq
DB search
MNNLSFDDNSLDNLDPSFTLNEPNEIDTALLNDIDDMLKLINNQDGDFPGLFDPHFGPPS
TPMQDVLSTQSSSLESYLEGPPSSTPSLNVYLPPQPQIFQSQQQQQQPPAQLIQPSPQHI
KQEPMQLSQAQQAQQQVPPPPKPQQAVMMPQNFVASPQPQFTQQPLLNCPNQAGFTTVQQ
GIAAPQLQNLSTSLQQIQPVTIQTPVQSIPTQQLLTTASPNQTVSQQLQQVPVLLQPQFI
KADSLLLTTLKTDGTSVVTAVKTPCITSLATTSTPVHTTPIQALVSGGTILTTVPVVVDA
DKLPINRITANGKMACMTQNKGEKRTAHNAIEKRYRSSINDKIIELKDLVVGSEAKLNKS
AVLRKAIDYIRFLQQTNQKLKQENVTLKMVTQKNKSLKDLVASSGINMDVPMEGVKPEGM
DELTPPPSDAGSPSHNSPFSLCSSDSEPDSPFCDNTKVNVKQEVPSPTTIGMLDRSRMAL
CTFVFFCLSFNPLASLMGSIGGGRALEHGGLHGTTRNMLGTEPIADSSGWFDWMLPTLFL
WAINGAIILGVFVKLFIYGEPVTRLHSESSVLFWRHRKQADLDLARGEFAQASQNLWTCL
KALGRPLPTSNMDLACSLMWNLIRGVLQRLWVGRWLAGCAGGLRRDKELKEDVQKGSRDA
ALVYHKLHQLHMTGKCVGGHLSALNMALSAVNLAECAGDSISVATLAEIYVAAALRMKTS
LHRCFHFLARFFLSSARQVCLSQSGSVPPAMQWLCHPLGHRFFVDGDWFVKSTPRESIYS
VAGNSVDPLAQVTQAFREHLLEKALYCIAKPESTKPPTEGESEFSDALEYLQLLNGCSDA
AGITTQTFSIGSNMAAVTGTDPVAKWWASMIVVAVNWLQGEDEAAERLYSVVDYMPKTLH
TTENPLPKAALFAFRAVRATLGKQDTSQVSLAHCEKASGYLRDSLNMAPQTRSNVDKAAQ
LLLCDLLLVTRTSLWQQQLNVSQSLNCIYQASPLELRGFQQDLSSLRKLAQSFRPAMRRA
FLHEATARLMAGASPTRTHQLLDHNLRRRVTQASKAGELETHPGQREHAEALLLACRYLP
PTFLSAPGQRVGMLAEAARTLEKLGDKRMLHDCQQMIMKLGSGTTVTSS
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttgtccttcgatgataactctttggacaatctggatccatcttttactctc
aatgagcccaatgaaatagatacagcacttctcaatgatatagatgatatgctaaagctg
atcaacaaccaggatggcgacttccctggtctgtttgatccccactttggccctcccagc
acgccgatgcaagatgtgctgtccacgcagagctcgtccctcgaaagctacctggaaggc
cccccatcaagcacaccctccttgaatgtgtacctgccaccacagcctcagatttttcag
tctcaacaacagcaacagcagccccccgctcaactgatacagccgtctccccagcatatc
aagcaggagccgatgcagctgtcccaagcccagcaagcccagcagcaggttccaccgcca
cctaagccgcagcaggctgtcatgatgccccagaatttcgtggcctccccccagccgcag
ttcactcaacagcccctgctgaactgtccgaaccaggccggattcacaacagtacagcag
gggatcgcagcgccgcagttgcagaacctgtccacctccctacagcagatccagccagtg
accatacagacaccagtccagagcattcccacccagcagctactgactacggcaagtcct
aaccagaccgtttcacagcagctccaacaagtgccggttttgctgcagccccagttcatc
aaggcagactcactcctcctgacgacgctgaagacggatggcacttctgtcgtgacagct
gtcaagacgccctgcatcacatccctggccaccaccagcactcctgtgcataccacaccc
atccaggcactagttagtgggggtacaatattaacaaccgtgcctgtggtggtggatgcc
gataaactcccaatcaatcggataacggccaatggaaaaatggcttgcatgacgcagaac
aaaggcgagaagcggaccgcgcacaatgccattgaaaaacgctatcgatcttccatcaat
gacaagattatagaactgaaagatctcgtggtgggatcagaagccaagctaaacaaatcc
gctgtgttgaggaaggcgattgattacatccggttcctacaacagaccaatcagaagctg
aagcaagagaacgtgacactcaaaatggtcacccagaaaaacaagtctttgaaggacctg
gtagcctccagcgggattaacatggatgtcccaatggagggggtgaaaccagaaggcatg
gacgagttgaccccacccccgtcggacgccggctccccctctcacaacagccccttctcg
ctgtgcagcagcgactcggaacccgacagcccattctgtgacaacaccaaggtcaatgta
aaacaggaagtcccgtcccccaccactattggcatgctagatcgctctcgaatggcactg
tgcacctttgtcttcttctgtctgtccttcaatccactggcatctctaatgggcagtatc
ggcgggggcagggctttagaacatggagggctccatggcacaaccaggaacatgctgggc
acagaaccgattgctgactcctctggctggtttgactggatgttacctacgctgttcctc
tgggcgataaatggagccatcatccttggggtgttcgttaagctcttcatttacggtgag
ccagtgacccggctgcactcggagtcttcggtcctgttctggaggcaccgcaagcaggcg
gatttggacctggccaggggagagtttgcccaggcatcacagaacctatggacgtgcctg
aaggctctgggccgcccgcttcccacctcgaacatggacctagcctgcagcttgatgtgg
aacctgatccgcggtgtcctccagcgactgtgggtagggcgttggctcgcaggctgtgct
ggcggcctacgcagagacaaggagctgaaagaggacgttcaaaagggttcgcgggacgct
gcactggtttatcataaactgcatcagctacacatgacaggcaagtgtgttggtggccat
ctgtctgccttgaatatggcactgagcgcagtgaacctggcagagtgtgccggggactcc
atttctgtcgctacattagctgagatttacgtggctgcagccttgcgtatgaagaccagc
ctccaccgatgcttccactttttggcccgtttctttctgagcagtgcccgtcaggtgtgt
ctttctcagagtggtagtgtccctcctgccatgcagtggctgtgtcaccctctgggacac
cgcttctttgtagatggagactggtttgtaaagagcacccccagagagagtatctatagt
gtcgctggcaactcagttgatcctctggctcaggtgacccaggcctttcgcgaacatctg
ctggaaaaagccctttactgcattgctaagccagagagcactaaaccaccaacagaggga
gaaagtgagttctctgatgctctggagtatctccagctcctgaacggatgctcagatgca
gctggcatcaccactcagaccttctccattgggtccaacatggcagctgtcactggcacg
gatcccgtggcaaagtggtgggcatccatgattgtggtggctgtgaactggctgcagggg
gaggatgaggcggcagagagactctattctgtggtggactacatgccaaagaccttgcat
actactgaaaatccattgccaaaggcagcattgtttgctttcagggcagtgcgagccacc
ctagggaagcaggacacgagccaggtgagcttggcccactgtgagaaagccagtggctac
ctgcgggacagcctcaacatggccccacagaccagaagcaacgtcgacaaggcggcccag
cttctgctatgtgaccttctgttggtgacgaggacgagcttatggcagcagcagctgaat
gttagccagtccctgaactgcatctaccaggcatctccgctagagctgcgtggcttccag
caggatttgagcagtctgcgtaagctggcgcaatccttccgtcccgccatgcgcagggca
ttccttcacgaggctacagcaagattgatggcaggggccagtccaactcgaacccaccag
ctgttggaccacaatctccggaggagggtcacccaggccagcaaagcaggtgagctggag
acccaccctggtcagcgggagcacgccgaagccctcttgctggcatgtcgatatcttcct
ccgaccttcctctcagcgccaggccagagggttggcatgttggctgaagcagccaggacc
ctggagaaactgggagacaagcggatgcttcacgactgtcagcagatgatcatgaaactg
ggcagcggcaccactgtcacctccagttag
DBGET
integrated database retrieval system
