KEGG   Latimeria chalumnae (coelacanth): 102349695
Entry
102349695         CDS       T02913                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3a subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102349695 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcm03041]
    102349695 (SF3A1)
Spliceosome [BR:lcm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102349695 (SF3A1)
 Complex B
    102349695 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    102349695 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 102349695
NCBI-ProteinID: XP_006010684
Ensembl: ENSLACG00000003565
UniProt: H3A2Y2
LinkDB
Position
Un
AA seq 787 aa
MPAGPVQMVQPPQAENNKAPDEPKEESPTSKPVVGIIYPPPEVRNIVDKTASFVARNGPE
FEARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQQAPQQQL
PQKVQAQVIQETIVPKDPPPEYEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQK
EQRNYQFDFLRPQHSLFNYFTRLVEQYTKILIPPKGLILKLKKEADNPKEVLDQVKYRVE
WAKFQEREKKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGQFPPPTTPEELGARI
LIQERYEKFGESEEVEMEVESDEEVEEREEKKEETTTQMDQDTQVQDMDEGSDEEDEQKV
PPPPETLMPPPLPPTPDQVIVRKDYDPKASKPVPSAPAPDEYLISPITGEKIPASKMQEH
MRIGLLDPRWLEQRDRSIREKQSEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKI
GEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEKIGPS
KPVDMPQPPPPPSSAPNLPNSAPPINTIPRPPSMPPPPPVRTTVVSAVPVIPRPPMAPVV
RLTPGPILTAPMPPVMHAPRINVVQVPPNASVMAPRPPPMLVPTAFVPAPPVAPVPTSAP
MPPSHPPPPMEDEPSSKKMKTEDSLMPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLNGQV
LAFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSVIHLALK
ERGGRKK
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgccggctggtccggtgcaaatggtccagccacctcaggctgagaacaataaggcacca
gatgaacccaaagaggagagtcccacttccaagccagtggttggtattatctacccacct
ccagaagtcaggaacattgttgacaagactgccagcttcgtagccagaaatggtccagaa
tttgaagctcgtatccgacagaatgaaatcaacaatccgaagtttaactttctgaatccc
aatgacccctaccatgcatattaccgccacaaggtcaatgagttcaaggaggggaaagcg
caggagccttcggctgctgtccccaaggttatgcagcaacaggcaccccagcagcagctc
cctcagaaagtgcaagcacaggtgatccaggaaacaattgttcccaaggatccccctcca
gagtatgagtttattgctgaccctccctcgatctcagcgtttgacctggatgtggtgaaa
ttgacagcacagttcgtggctcggaatggacgccagtttcttacgcagctcatgcagaag
gagcaaagaaactaccagtttgacttcctgcgacctcagcacagtcttttcaactacttc
acaaggcttgtggagcagtacaccaagatcctgattccacctaaaggattaattctcaag
ctgaagaaagaagctgataatcctaaagaagttttagaccaggtcaaatatcgagttgaa
tgggcaaagttccaggaacgagagaagaaaaaggaagaggaggagaaggagaaggagagg
gttgcttatgcgcagattgactggcatgactttgttgttgtggaaactgtggacttccaa
cctaatgaacaaggtcagtttcctcctccaacaactccagaggaactgggagctcgcatt
cttatccaggagcgatatgagaagtttggagagagtgaggaggttgagatggaggtggaa
tcagatgaggaagtagaagaaagggaggagaaaaaagaagagacaacgactcagatggac
caggacacacaagtacaggatatggatgagggttcagatgaagaggatgagcagaaagta
ccgccccctcctgagactctaatgccaccacctctcccgcctaccccagaccaagtcatt
gtcagaaaggattatgatcctaaagcttcgaagccagttccatcagctccagcaccagac
gagtacctcatatctccaattacaggagagaagattcctgctagtaagatgcaggagcac
atgagaattggcttgctggatccccgctggctagaacagcgtgatcgatcgatccgtgag
aaacagagcgaagatgaggtgtatgctccaggtttggatattgagagcagcctgaagcag
ctggctgaacgtcgtactgatatcttcggtgtggaagagacggctattggtaagaagatt
ggagaagaagaaatccagaaaccagaggaaaaggttacttgggatggtcactcgggcagc
atggcacgtacccagcaagctgcccaggctaacatcaccctgcaggaacagatagaagcc
attcataaggccaaagggctcgtcccagaagatgacagcaaggagaagattggacctagt
aagccagttgacatgccccaacctccgccaccaccttcatcagccccaaatcttcccaac
agtgcaccaccaatcaacactataccacgaccaccttcgatgccgccaccacctcctgtt
cgtacaacagttgtatctgcagttcctgttattccaaggcccccaatggctcctgttgta
cgtttaaccccagggcctatcctaacggccccaatgccaccagtaatgcatgctcctcgc
atcaacgtggtccaggtaccaccaaatgcatcagtcatggcacctcgcccaccacctatg
cttgttccaacagcatttgtgccagctcctcctgttgcccctgtccctacttcagccccg
atgccaccttcccacccaccccctcccatggaggatgaaccctcctcaaagaagatgaaa
acagaggacagcctgatgccagaagaagagttcctgcgcagaaataagggaccagtaaca
gtaaaggtgcaggttccaaacatgcaggacaagaccgaatggaaactgaatggacaggtg
ctggcctttacgctcccacttacagatcaggtctctgttatcaaggtgaaaatccatgag
gccacaggaatgcctgctgggaaacagaagttgcaatatgagggtattttcatcaaggat
tccaactcattggcttactacaacatgacgagtggatcagttatccacctggcactaaag
gaaagaggtggcaggaagaagtaa

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