Latimeria chalumnae (coelacanth): 102349880
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Entry
102349880 CDS
T02913
Symbol
HMBOX1
Name
(RefSeq) homeobox containing 1
KO
K24885
homeobox-containing protein 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102349880 (HMBOX1)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
102349880 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
HTH_3
DUF494
HTH_37
HTH_31
HTH_24
HTH_26
CUT
HTH_23
Motif
Other DBs
NCBI-GeneID:
102349880
NCBI-ProteinID:
XP_006011929
Ensembl:
ENSLACG00000003225
LinkDB
All DBs
Position
Un
AA seq
375 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHSDKFGRRSSYGGGSY
SNSNNNVPASSSTATAATQTQNRAMSPAPSNSYDTSPPCITNQNGREGSERLVAANGKMS
PTRYSTNSIGQRSYSFEASEEDLDVDDKVEELMRRDSSIIKEEIKAFLANRRISQAVVAQ
VTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIHVDDAEWRQT
PPPVSATSGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEIANACNAVIQKPEA
AILESHGIDVQSPGGHSNSDDVDGNDYSEQDDSTSHSDHQDPISLAVEMAAVNHTILALA
RQGAGEIKTEALEDD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactacacagatgaaccccgattcactatagagcagatagacttgctacagcgg
ctccgacgtaccggaatgaccaaacacgagatccttcacgccttggagaccttggaccgc
cttgaccaagagcacagtgacaagttcggcaggaggtccagctacgggggcggctcctac
agcaacagcaacaacaacgttcccgcctcgtcatccacagccacggctgctacgcagaca
cagaaccgggcgatgtccccggcgcctagcaacagctacgacacctcgccgccctgcatc
accaatcagaatgggagggagggcagcgagaggctagtggcggccaatgggaaaatgtcg
cctactcgctactctacaaacagtattggtcaaaggtcatatagctttgaggcgtcggaa
gaagatcttgatgtagatgacaaagtggaagaactgatgaggagagacagcagtataatt
aaagaagaaatcaaagccttcctagctaaccggaggatttctcaggcagttgttgcacag
gtcacaggtatcagccagagccgaatctcccattggctgctccagcagggctccgatctg
agcgagcagaagaagagagcgttttacaggtggtaccagctggagaagaccaatccaggt
gctacattaagtatgaggcctgccccaatccacgtagacgacgctgagtggagacagacc
cctcccccagtcagtgccacatcaggcacgttcagattgcggcgagggagccgtttcacc
tggaggaaggagtgcctggcagtcatggagagctattttaatgataaccagtatccagac
gaggcaaagagagaggaaattgcaaacgcctgcaacgctgttatacaaaaaccagaagca
gcaatcctggagagccatggcatcgatgtgcagagtcctggaggccattccaacagtgac
gatgtggatggcaatgattactctgagcaggacgacagcactagccacagcgatcaccag
gaccctatttccctagcggtggaaatggcagctgtcaaccacaccatcttggcgttggcc
aggcaaggagccggggagatcaagacagaagccctggaggatgactga
DBGET
integrated database retrieval system
