Latimeria chalumnae (coelacanth): 102349921
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Entry
102349921 CDS
T02913
Symbol
RUBCN, KIAA0226
Name
(RefSeq) RUN and cysteine rich domain containing beclin 1 interacting protein
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102349921 (RUBCN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102349921 (RUBCN)
Membrane trafficking [BR:
lcm04131
]
Autophagy
Other autophagy associated proteins
Others
102349921 (RUBCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
102349921
NCBI-ProteinID:
XP_006002415
Ensembl:
ENSLACG00000012227
LinkDB
All DBs
Position
Un
AA seq
991 aa
AA seq
DB search
MDSRRDGEFGYRTGNDHWKLLASLKTTVDGLVSANNPNVWSKYGGLERLCRDMNNILLHG
LLPDQVYCTQRDFWPFVKHVRWVCPHLSCHIDQFLNLEGESCSSARTDQHKAQRWLQHSL
QFHCLSVQLKPLLSSYNFSRKFYSDSAFLLDHAYVTAMFQCLEAVEQNDPKLLAQIDTSM
FTSKSDPSLTKLKSQSLTALPGSRWVPPADGVHRRYTTCYSSLPRIPSAMSGPLDTRWES
WLSNDSGVSQHDSLRQFQLSLWGERPGPDPPVSENPQLMVSCPSDALLSINEAHSSTPNS
PSEDPLSDVDDGPEYLAIGNLGRRVRASSQGSIKSASSNSLSSQKAEGQATAGGSTRSSS
LLNHPRRSSFSEGQNLMPQGCLKKSHARSHSDTGLDAAKLPESHADGSKLKDVGAFSSPS
SELSTPSSLYMEAEGAHYLNAADGMFRRPSEGQSLISYLAEQDFGSCADLEKENAHFSIS
ESLIAAIELMKCNLMIRRLQEEEEEEEESDKEIQELKQKIRIRRQQIRTSKLLPRYKDES
DNFPTTDSGSQISSRDSTQLSDSGSTDGVDEYELRDGNDGSNLIQMSKNGLSVSMASLFS
DADIRKSLTAGSSKHFLSSEPICSSFFHSNSAEAVAMGLLKQFEGMQLPAASELDWLVPE
HDAPQKGSRLSFKKLCKLARRFKKKLTPRSRFWLLPIPNSLPISPDDGEHADIYKLRIRV
RGNLEWAPPRPQIIFNIHPSPKRKVIVAKQNYRCAGCGIRTDPDFIKRWRYCEYLGKYFC
QCCHDNAQSIIPSRLLRKWDFSKYYVSNFSKDLLSKIWNDPLFNIQDINTALYRKVKALE
QVRLLRIQLVHLKTMFKTCRLAKDLLDLYDTEPGHLTEDLHLYSLSDLTATRKGDLVQRL
KELVKPGIAHVENCVLCQAKGFICEFCGNEKDIIFPFQLNKCKRCEECKSCYHKSCFRSE
QCPKCDRMQARRELLARQNMEPYASEPEEGD
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcggagagatggcgagttcggctacagaactggcaatgaccactggaagctg
ctggccagtctgaagactaccgtggatgggctagtctctgctaacaaccccaatgtctgg
tcaaaatatggtggcttggaacggctctgccgggacatgaacaacatcctgctgcatgga
cttctccctgaccaggtttactgcacacagagggatttctggccctttgtgaaacacgtg
cgctgggtctgtccccacctttcctgccacattgatcagtttttgaatttggaaggagag
agttgcagttctgccaggactgaccagcacaaagcacagaggtggctccagcacagtctg
cagtttcactgcctctcagtacagctgaaaccgctcctgagcagctataacttcagcagg
aagttctactcagattctgccttcttgctggatcatgcctacgtgacggccatgttccag
tgtctggaagctgtggagcagaatgatcccaaactgttggctcagattgacacctccatg
ttcaccagtaagagtgatccttctttgactaagttaaagagtcagagtctgactgcgcta
cctggatctaggtgggtgccacctgcagacggagtgcaccgcaggtacaccacctgctac
agcagccttcccagaattccctcggctatgtccggacctctagatactagatgggagtcc
tggctcagtaatgattctggtgtctcccaacatgactctctcagacagttccaactctca
ctgtggggtgagaggcctggccctgacccaccagtctcagaaaacccacagctcatggtg
tcctgtcccagtgatgcactgctttccatcaacgaggcacactctagcaccccgaacagc
cccagtgaggaccccctgagtgatgtcgatgatggcccagagtacttggccattgggaac
ctgggacgccgtgtccgagcgtccagccagggtagcatcaaaagtgctagctccaattca
ctctcctcccagaaggccgagggtcaggcaacagcaggtggaagtacacgcagttcctct
ctgctcaatcatccgcgccggtccagcttctcagaagggcaaaacctgatgccacaaggg
tgcctcaaaaagagccatgcacgctctcactcggacacaggtctggatgcagcaaaactg
ccagaatcgcatgctgatggctcaaagctgaaagacgttggtgccttctcctctccgagc
agtgagctcagtacgcccagctccctctacatggaggcagaaggagcccactacttgaat
gcggcagatgggatgttccggagaccctcagaaggtcagtccttgatcagctacctggcc
gaacaggattttggaagctgcgctgacctggaaaaggaaaatgcgcacttcagtatttca
gagtcgctgattgctgctatcgagctgatgaagtgtaacctaatgatccggcgactgcag
gaggaggaagaggaggaggaggagagcgacaaggaaatccaggaactgaagcagaagatc
cgtatccgtcggcagcagatacgaaccagcaagctccttcccagatacaaggatgagtct
gacaacttcccaaccacagacagtgggtcccaaatcagctcccgagattctacacagctc
tccgactcaggatccacggacggagtggatgaatatgagttgagagatggtaatgatggc
tctaacctgattcaaatgtctaagaatggactctcagtgtcaatggcatcactattttca
gatgcagacattcggaaaagcctgactgccggcagcagcaagcactttctgagctctgag
cccatctgctcctcatttttccattcaaattcagctgaggctgttgccatgggcctgctg
aagcagtttgaggggatgcagcttcccgcggcctctgaattggactggctggtaccagaa
cacgatgctccacagaaggggtcacgcttgtcttttaaaaaactctgtaaacttgcccgg
cgcttcaagaaaaagctgacgcccagatcgcgcttttggctcctgccgattccaaactcc
ttgccaatctctccagatgatggggagcatgcagatatctataaactccggatccgggtc
cgagggaatctggaatgggcaccgccgcggcctcagattatctttaacattcatccgtca
ccaaagaggaaagtgattgtggccaaacagaactatcgctgtgccggctgtggaatcagg
accgaccctgactttataaagcgttggcgttactgtgaatacctggggaagtacttctgc
cagtgttgccatgacaatgcccagtccatcatccccagccgcttgctgcggaagtgggac
ttcagcaaatattatgtcagcaatttctccaaggatttactgagcaagatctggaatgac
cccctctttaacatccaggatatcaacactgccctctacaggaaggtgaaggcactggag
caagtgcggcttttgaggatccagctggtacatttgaagacaatgtttaaaacttgccgt
ctggccaaagaccttctggacctttatgacaccgaaccgggtcacctgactgaagacctc
catctttactcactcagcgacttgacagccacccggaagggcgacctggtccagcggctg
aaggagctggtcaagcctgggattgctcatgtggaaaactgtgtgctgtgccaagcgaaa
ggatttatttgtgaattctgtggcaatgagaaagacatcatcttcccctttcagctcaac
aaatgtaaaagatgtgaagaatgtaagagctgctaccacaagtcctgcttcaggtcagag
cagtgcccaaagtgcgaccggatgcaggcacgacgtgagctgctggcaaggcagaacatg
gaaccgtatgcatcagaaccagaggagggggactag
DBGET
integrated database retrieval system
