Latimeria chalumnae (coelacanth): 102349993
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Entry
102349993 CDS
T02913
Symbol
LRBA
Name
(RefSeq) LPS responsive beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102349993 (LRBA)
Membrane trafficking [BR:
lcm04131
]
Endosome - Lysosome transport
Others
Others
102349993 (LRBA)
Endosome - Golgi transport
102349993 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102349993 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Beta-prop_EML_2
WD40_Prp19
Laminin_G_3
WD40_CDC20-Fz
Beta-prop_EML
KNTC1_N
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_WDR19_1st
SUKH_6
DED
Motif
Other DBs
NCBI-GeneID:
102349993
NCBI-ProteinID:
XP_014344056
LinkDB
All DBs
Position
Un
AA seq
2519 aa
AA seq
DB search
MVTLVHIYNRWKNSEIRCYVNGELASFGELAWLVNTSDTFDKCFLGSSETVDANRMFCGQ
MGAVYLFSEALNAAQIFAIYQLGSGYKGTFKFKVESDLLLAEHHKMLLYDGKLCSSIAFT
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVRAVTTHSIQSAIHSIGGIQVLFPLF
AQLDYRQHSSDLVDTTVCSTLLAFVMELLKNSVAMQEQILSCKGFLVIGNILEKSSKAHI
TRAVLELCLAFAKYLSNLQNGVPLLKQLCDHVLLNPAVWIHAPAKVQLHLYTYLSTEFVS
TVTIYNAIRRVGTVLQIMHTLKYYYWVVNPQDRSGVIPKGLDSSRPNQKEILSLRAFLLL
FVKQLVMKDHGVKEDELQSILNYLLTIHEDDNLMDVLQLLVALMAEHPGSMIPAFDQRNG
MRIVYKLLASKSEGIRVQALKVMGYFLKHLVPKRKAEIMLGHGLFSLLSERLMLQTNVFT
MTTYNVLFEILIEQISTQVVHKQHPDPDSSLKILNPQILKVIAMLLRNSPQTPETTEVRR
VFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCFVSPKNSEEQKITEMVYAIFRILLYH
AVRYEWGGWRVWVDTLSITHSKVTFEMHKENLARMFREYQRQESENIGQGPMSPLRTISG
VSSGDEATLRNEISEIADPADAVRQQSVEDAAQKPEGDQRTSVTTTEVEKTEKETCQSPT
ELKFEKETTDLADPEVTSEAKTLEEVKICENHEESSESPSVRSLAEVAKTFLEEVTAEAC
EKLEREMSRKWHEIQEEEKPLENGEPGSSASEGQETPASAEVTSKDKSSDTLTSESKDVE
SPSDAVTSDPALGSGEGATGVKPEDAKPVDEAKNESKEELIIQAGKAEAAACNDVDKNTV
QSSTKPKQMKIAKLDVSSVASDTEKLELKANLSPESAQAQPSSPEQPTLQRHVSDSNERK
KDSPTATRSATMFRIPEFKWSHMHQRLLTDLLFSIETDVQMWRSHSTKTVMDFVNSSENV
IFVHNTIHLISQVVDNITMSCGGILPLLSAATSATHELENIEPTQGLSIDASVTFLQRLI
SLVDVLIFASSLGFSEIEAERNMASGGILRQCLRLVCAVAVRNCLECQQYTCKKSAIENI
KGQKAMQSLLGTGKSSAAKSPVDIVTGGLSPIRDLDRLLQDMDINRLRAVVFRDVDDSKQ
AQFLALAVVYFISVLMVSKYRDILEPQNERRPPQRSQSLKNTEGLESTTSTLAAHTEELE
STSLFARRRDSGIGEEPVSVLAGDSIVVSTASPETVSAGPDAISEVLSTLSSEVKKNQES
RYDGDSESKPAASAPTGNQGKNVNVKDILKSLVSTPVEATVVDPALIPPVFLGAKGEAPT
EQPIQFRSFDRSVVVAPKKTLGVASGSMTVISPTDAVSVVASSDTNQDSTADPAGSGNLS
ANLPSVPAVASVPEGSVANMSITERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQEL
LIEGTSLVCMKSTSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTLNDHLVR
VANEAEFILSRQRAEDIHRHAEFESLCAQYSAEKREEEKMCDHLIRAAKYRDHVTGTQLI
QKIINILTDKHGAWGSSAQSRPREFWRLDYWEDDLRRRQRFVRNPLGSTHPEATLKAAVE
HVPEEDVLVKGKQSIKGQVLGNQNSESEIFLEGDDDTVSSLEEKDLENLTGPVSLCTPAY
LVAPSLTVKGTLSITSSELYFEVDEEDPSFKKIDPKILAYTDGLHGKWLFTEIRAVFSRR
YLLQNTALEIFMANRAAVMFNFPDQAMVKKVVHCLPRVGVGTNFGLPQTRRISLASSRQL
FKASNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWIITNYESETLDLTLPSN
FRDLSKPIGALNPKRAAFFSERYDTWEDDQVPKFHYGTHYSTSSFTLMWLLRIEPFTTFF
LNLQGGKFDHADRTFSSVLRAWRNCQRDTSDVKELIPEFFYLPEMFVNSNNYNLGVMEDG
IVVSDVELPPWAKTPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEGVRSLNIFY
YLTYEGAVNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVAPLMFTDQMH
QDVIMVLKFPSNSPVTHVAANTQPSLAVPAVITVTANRLFAVNKWFSITGHQGAVQNQPY
QLPVEIDPLIASNMGMHRRQITDLLDQSIQIHSQCFVITADNRFILVCGFWDKSFRVYST
DTGKLTQVVFGHWDVVTCLARSESYIGGDCYILSGSRDATLLLWYWNGKNCTIGENPISE
FATPRAILTGHDCEITCATVCAELGLVISGSKEGPCLIHSMNGDLLRTLEVPKEYKIWPK
LIQASTEGHCVVYYEKSLLCVFSVNGKLLASIEMEDNTRAMLLSRDGQYLLAGGDSGELT
LWRVCDLKLLFTYPACDAGIRSMAMSHDQRCIVTGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
7560 nt
NT seq
+upstream
nt +downstream
nt
atggtgactttagtacatatttacaaccgctggaaaaacagtgagatacgatgttacgta
aatggtgaactggcgtcgtttggagagctagcttggcttgttaataccagtgatacattc
gacaaatgttttctgggctcttctgaaacagtagatgccaaccgtatgttctgtggccag
atgggtgctgtctacctcttcagtgaagctcttaacgcagctcagatttttgctatttac
cagctgggttctggatacaagggtacctttaagttcaaggtagaaagtgacctcctcctt
gctgaacatcacaaaatgctactgtatgatgggaaattgtgcagtagtattgcatttaca
tataatcctagagctacagatgcccagctttgtctagagtcttcccctaaagataaccct
tctatctttgtgcactcacctcatgctcttatgcttcaggatgtgagagctgtcacaaca
cattccatccaaagtgctatccattcaataggaggaattcaagttctgttcccgctgttt
gcacagcttgattatcgacagcattcttctgatcttgttgacaccactgtctgttccact
ctactggcatttgtaatggagctgctgaagaactctgttgctatgcaagagcagatcctt
tcctgtaagggcttcctcgtgattggaaatattctggaaaagtcttccaaagctcacatt
accagagctgtgttagagctgtgtctggcctttgccaaatacctgagcaatctgcagaat
ggcgttcctttgctcaaacagctgtgtgaccacgttcttcttaatcctgcagtctggatc
catgctccagccaaggttcagctgcacctgtacacttacttgtctacagagtttgtcagt
actgttaccatctacaatgcgatccgtagagttgggactgtactgcaaataatgcacaca
ctcaaatattactattgggtggtaaatccacaggaccgcagcggagtcatcccaaaaggc
ttggattcttcacgaccaaaccagaaagaaattctctccctgcgtgcattccttctgctg
tttgtaaaacagttagtgatgaaggatcatggagtaaaagaagatgaattgcagagtatc
ctcaattacctgctcacaattcatgaggatgataacttaatggatgttctgcagctgctt
gttgctctcatggctgaacacccaggatccatgattcctgcatttgatcagagaaatgga
atgcggattgtctataaacttctggcatctaaaagtgaaggaataagagtacaagctcta
aaagtgatggggtactttctaaagcatttggtacccaagagaaaggctgaaatcatgctt
gggcatggcttgttctcgttgttgtctgaaagactgatgcttcaaactaacgttttcacc
atgaccacatacaatgtcctgtttgagatcctgatagagcagatttccacacaagtagta
cacaagcaacaccctgatccagactcctctctgaaaattttaaatcctcaaatactcaaa
gtgatagcaatgctgctacgcaactcacctcagactccagaaacaacggaggtccgtcga
gtttttctgtcggacatgattaaactttttaataacagcagagaaaacaggaggagtttg
ctgcagtgctcagtgtggcaagaatggatgctttcgctttgctttgtcagtccgaagaac
tctgaggagcagaagattacagaaatggtgtatgctattttccgaattctgctttaccat
gctgtccgatatgagtggggtggctggcgtgtgtgggtagataccctctctatcacacac
tcaaaggtcacttttgaaatgcacaaagaaaaccttgcaagaatgttcagagagtaccaa
agacaagaaagtgaaaatattggacaagggccaatgagtcccctcagaactatctcagga
gttagcagtggtgatgaagccacacttaggaatgaaatttcagaaatagctgatcctgct
gatgcagttagacagcaaagtgttgaagatgcagcacaaaagcctgaaggtgaccaaaga
actagtgttacaactactgaggtggaaaagaccgaaaaagaaacatgccagtcccccaca
gaactaaaatttgaaaaagaaaccacagatctcgcggatcctgaagtaacttctgaagca
aagacgttggaagaagttaaaatctgtgaaaatcatgaggagagttctgaatcaccatct
gtcagatccttggctgaggtagcaaagactttccttgaagaggtgacggctgaagcttgt
gaaaaactagaaagggaaatgtctagaaagtggcatgaaattcaagaagaagaaaaacct
ttagaaaatggagagccgggcagcagtgcaagtgaaggccaggaaacaccagcatcagca
gaggtcacttctaaagataaatctagtgacacattgacctctgaatccaaagatgttgaa
tctccttcagatgctgttacgtcggacccagcactgggatcaggagaaggagctactggt
gtcaaaccggaggatgcaaaaccagttgatgaggctaagaatgagtcaaaagaagaattg
atcattcaggctggtaaagctgaagctgctgcctgtaatgatgtggataaaaatactgtt
caaagtagcaccaagcccaaacagatgaagattgcaaagcttgatgtttctagtgtggct
tctgatacagagaagcttgagcttaaagcaaatctgagtccggaatctgctcaagctcaa
ccttcttctccggagcagcccacattacaacggcatgtgtctgattctaatgaacggaag
aaggactctccaactgcaacccggtctgccacaatgtttcggattcctgaattcaagtgg
tcacacatgcaccagcgattgcttactgatctgctgttttcaatagagacggatgtacag
atgtggagaagccattctacaaagacagtaatggactttgtaaacagcagtgaaaatgtc
atctttgtccacaacaccatacacctgatttcgcaagttgtggataatatcactatgtcc
tgtggtgggattttgcctttgctgtctgcagctacatcagcaactcatgaattggagaat
attgagcctactcaaggtttatctatagatgcctctgtgactttccttcagaggttaata
agcctggttgacgtgctaatttttgcaagctcgcttggcttcagtgaaatagaagctgag
agaaacatggcttctggaggaatcctgcggcagtgccttcgattggtttgtgctgtggca
gtacggaactgcttggaatgccaacaatatacatgcaagaaatctgctatagaaaacatt
aagggacaaaaagccatgcagagtttgttgggaacaggaaagtcttcagctgcaaagagt
cctgttgatattgtgacaggtggtctttctccaatacgagatcttgacagacttttacaa
gatatggatattaaccgccttcgagctgtagtctttagagatgtggatgacagtaaacag
gctcagtttctagccttggcggtagtatattttatctctgtacttatggtgtcaaaatat
agggacatcttggaacctcagaatgaaagaagaccaccacaacgtagccagtcattaaag
aacactgaaggtttagaaagtaccacatcaactttagcagcacatactgaagaattggaa
agtacttccttgtttgctcgaagaagagattctgggattggggaggaaccggtctcagtt
ttggctggcgattccattgttgtgtccacagcaagtcctgagacggtcagtgctggccca
gatgctataagtgaagtattatccaccctctcctcagaggttaaaaaaaaccaggaaagt
agatatgatggtgactccgaaagtaaacctgctgcctctgcaccaactggaaaccaagga
aagaatgtcaatgtgaaggacatccttaaaagtttggtcagcacacctgtagaagccact
gtagttgatcctgcattgataccaccagtgtttcttggagcaaaaggcgaagcccccaca
gaacaaccgattcagttccgctcctttgatagaagtgttgttgtggctccaaagaagact
ctgggtgttgctagtggaagcatgacagtgatttcacctacagatgcggtcagtgtggtg
gcgtcttcagatactaatcaagactcaactgctgaccctgctggatccggaaatctgagt
gcaaacctgccatcggtccctgcagttgcttctgtgccagaaggttctgttgcaaatatg
agtatcacagagcgactggaacacgctctggaaaaagctgcaccacttctgagagagatt
tttgtggactttgctccattcctttcacgcactcttctaggcagtcatgggcaagagctg
ctcattgaaggtacaagtctggtgtgcatgaagtctactagttcagttgtggagctggtc
atgcttctgtgttctcaggaatggcagaactccattcagaagaacgctggacttgccttt
attgaactcgtcaatgagggaagactgctgagccaaaccctgaatgatcacctggttaga
gttgcaaatgaagccgaattcatcctgagcagacaaagagcagaagatatccacaggcat
gctgagtttgagtctctatgcgcccagtattctgcagaaaagcgtgaagaagaaaagatg
tgtgatcatttgataagagcggccaagtatcgagaccatgtgactggcactcaactgata
cagaaaattataaacatccttacagataaacatggagcttgggggagttctgcacagagt
cgtcctcgtgagttctggcgccttgactactgggaagatgacttgcggcgccggcaacgg
tttgtacggaacccccttggatcgacacatcctgaagcaacattaaaagcagccgtggaa
cacgttccagaagaagacgttctcgttaaaggaaaacagtcgatcaagggccaagtttta
ggaaaccagaattcagaaagtgagatcttcttagagggagacgatgataccgtttcttct
ttagaagaaaaagacttggagaatttaactggtccggtcagtctgtgtaccccagcctat
ctcgttgccccctctttgactgtgaaggggaccttgtccatcacctcctctgagctatac
tttgaggtggatgaagaagatccgagttttaagaaaattgaccccaagattctggcctac
acagatggactacatggaaaatggttgttcacagagatacgagcggtcttctccaggcgc
tatctgctgcagaacactgcactggaaatcttcatggcaaacagagctgctgtcatgttc
aacttccctgaccaagccatggttaagaaagtagttcactgcctgcctcgcgttggtgtt
ggtactaactttggattgccacagaccagacgcatttctttggcaagttctcgtcaactc
ttcaaagcctccaacatgacacagcgttggcaacgcagagagatttccaactttgaatac
cttatgttcctcaacacaatagctggacggacgtacaatgacttaaatcagtatcctgtt
ttcccttggattattaccaactatgaatcagaaacactggaccttacgctgcccagcaac
ttcagggatttatccaagcccataggagcactaaaccccaaaagagcagctttcttttct
gaacgctatgacacctgggaagatgatcaagttccaaagttccattacggtactcattac
tcaacttcaagttttacgctcatgtggctgcttcgaattgaaccttttacaacatttttc
ttaaatctacaaggagggaagtttgaccatgcagacagaaccttttcttcagttttgaga
gcttggcgcaactgccagcgagacacttctgatgtcaaggagctgatccctgaatttttt
tacctccctgagatgtttgtcaactctaataattacaatcttggagtgatggaggatggg
atagtggtatctgatgtcgaacttccaccatgggccaaaaccccagaagagtttgttcgc
ataaatagactggcccttgagagtgagtttgtttcatgccaacttcatcaatggatcgac
cttatttttggctacaaacagcaaggcccagagggtgttcgctcccttaatatcttctac
tacctgacttatgaaggagctgtgaatctgaattcaatcactgatccagtcttgagggag
gctgttgaagctcagatccgaagtttcggacaaaccccttcccagcttctcattgaacct
catcctccaagaagctctgcaatgcaagtggcaccactgatgttcactgaccagatgcat
caggatgttatcatggtactgaagttcccatctaactcgcctgtcactcatgttgcggcc
aacactcagcccagcctggcagtaccggcagttatcacagtaactgctaacaggctcttt
gctgtgaataagtggttcagtatcactggccatcaaggcgccgtacagaaccagccatac
cagctgccagtggaaatcgatcctctcatagctagcaatatgggaatgcacaggaggcaa
atcactgaccttttagaccaaagtattcagatccattctcagtgttttgtaatcaccgcc
gacaaccgcttcatcctggtctgtggcttctgggataagagtttccgtgtctattccact
gacacaggcaaactcacacaggtggtgtttggtcactgggatgtcgtcacctgcttggcc
cggtcagaatcctacattggaggggattgttatattctctcaggatcacgtgatgcaacc
ttgttgttgtggtactggaatggtaaaaactgcaccattggagaaaacccaataagtgaa
tttgcaactcctcgagctatcctgacaggtcatgactgtgaaattacctgtgcaacagtg
tgtgctgagctgggcctggttattagtggctccaaagaggggccatgtttgatacattcc
atgaatggagacttgctaaggaccctggaggtccctaaagaatataagatttggccaaag
cttatccaggcgtccactgagggccattgtgtggtatactatgagaagagtctgctctgt
gtgttcagtgtgaatgggaagctgttggctagtatagagatggaggacaacacacgggca
atgctgttgagtcgtgatggacagtacctccttgcaggaggagacagtggagaactgacc
ctgtggagggtgtgcgacctcaaacttctgttcacttaccctgcttgtgatgctgggatc
aggtccatggccatgtcacacgaccaaaggtgtatagttacaggcatggcttctggaagc
attgtcctattctacaatgatttcaatcgatggcatcatgaatatcaaactagatactaa
DBGET
integrated database retrieval system
