Latimeria chalumnae (coelacanth): 102350112
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Entry
102350112 CDS
T02913
Symbol
NFATC1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04010
MAPK signaling pathway
lcm04020
Calcium signaling pathway
lcm04148
Efferocytosis
lcm04218
Cellular senescence
lcm04310
Wnt signaling pathway
lcm04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102350112 (NFATC1)
04310 Wnt signaling pathway
102350112 (NFATC1)
04020 Calcium signaling pathway
102350112 (NFATC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102350112 (NFATC1)
09143 Cell growth and death
04218 Cellular senescence
102350112 (NFATC1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102350112 (NFATC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102350112 (NFATC1)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
102350112 (NFATC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
102350112
NCBI-ProteinID:
XP_006001644
Ensembl:
ENSLACG00000001788
LinkDB
All DBs
Position
Un
AA seq
470 aa
AA seq
DB search
MLSNGLSASSKFPFGPLVPAPAKETVDLQFFSSTCFTNMKSAEEDVYNCPTSSIATSLPF
NGGNTSLPSQCHSITSSSPIISVLQPSNHLHGYGGVADTGTGGYYLTPGIRPNGAPALES
PRIEITPYIGLHHGTNQYLPEPEIEEAPNSKRLNSIVTLTLPNADLYRDPSCLSPASSLS
SRSCNSEASSYESGYSYPSPQTSPWQSPCVSPKGTATEDGYHRGIAACTLMNSPRHSPST
SPRTSITDENWLTARNSRPPSPCGKRKYSLNGGHYRQPSYSPHHSPTPSPQTSPRVSVTE
ETWIDSTNQYTNSAIVAAINALTTDTTIDMSDCIPIKSRKTAVDHNSSMALKTEPVGEDH
GIISSTVDLSPEDFPGSRLPFKKENFGDQYLSVPQHPYSWTKQKTLSPTSYISQSLPALD
WQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQVLML
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcaacggtctttctgcttcctccaagtttccatttggaccactggttccagct
cctgcaaaagaaactgtggatttgcagttcttttcctccacttgtttcaccaacatgaaa
tccgcagaggaagatgtctacaactgcccaacttccagtattgctaccagtctgcctttt
aatggggggaacacttctctaccatctcaatgtcatagcattacttcatccagccctatc
atttctgtgctccagccatcaaatcatctacatggatatggaggggttgctgacactggt
acggggggatactacctgactcccggtatcagaccaaatggagctcctgccttagaaagc
cccaggatcgagatcacaccttacattggactgcatcatggtaccaaccagtacctccct
gaacctgaaatagaggaggccccaaattctaagcgattgaattcgatagtcactttgacc
ttgccaaatgctgatttatatagagacccttcttgcttgagcccagcaagtagcttgtct
tccagaagctgtaattctgaagcttcctcctatgagtcgggttactcctacccttcgcct
cagacttccccgtggcagtcaccttgcgtatctcccaagggcactgccacagaagatgga
taccaccgtggaatagcggcctgcacattgatgaactccccaagacactccccgtccacg
tctccaagaacaagtattacagatgagaactggcttactgctcgaaactcaagaccaccc
tctccctgtggcaagagaaagtatagtctcaatggtggccattatagacagccatcatac
tctcctcaccactccccaacaccatcacctcagacatctcctcgagttagtgtaactgag
gagacctggattgacagcactaaccagtataccaactctgccatagtcgcagctattaat
gcactcacgactgataccactatagacatgagtgattgcattcctatcaagtctcgaaag
actgcggtagatcataactcatccatggctctcaagactgaacctgttggagaggaccat
gggatcatatcgtccactgttgacttatcaccagaagacttccctgggtctcgactgcct
ttcaagaaggagaactttggtgatcagtacctctccgtgccccagcacccatattcctgg
accaagcaaaagacgctgtcacccacatcatacattagccagtctttgcctgcccttgat
tggcagctgccgtcccactctggaccttacgaacttcggattgaagtgcagcccaagtcc
catcaccgagctcattatgagacggaaggaagcagaggggccgtaaaggcatcagctgga
ggacatcctattgtacaggtattaatgctctga
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