Latimeria chalumnae (coelacanth): 102350127
Help
Entry
102350127 CDS
T02913
Symbol
WRN
Name
(RefSeq) Werner syndrome RecQ like helicase
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcm03032
]
102350127 (WRN)
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102350127 (WRN)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102350127 (WRN)
DNA replication proteins [BR:
lcm03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102350127 (WRN)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
102350127 (WRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
HTH_40
DNA_pol_A_exo1
HRDC
RecQ_Zn_bind
RQC
ResIII
SAM_GIDA_C
Carot_N
Motif
Other DBs
NCBI-GeneID:
102350127
NCBI-ProteinID:
XP_014349917
LinkDB
All DBs
Position
Un
AA seq
1400 aa
AA seq
DB search
MASQRELPGWMAGGNDGEAGEHDQKSWIKKNAAENSLPLLEFKGSIIYSYEANDCSFLSE
DIRTSLEEGSAVGFDIEWPPTFSKGKVGKVAVIQLCPSEKKCYLFHVSSMSSKSQRLCDL
LLYYLTNHYRVVVAPDEETPDSTKLKCCEKWSLDGLVKHLFMHRLFKENSVRCSNWNEFP
LDEDQKMYAATDAYVGLLIYQKLITMEFSHNSTPNLKREQVQLPSDIKKKLSTISCEMED
LANEVPDTFDCLNSNMQRAASILNEISEKLCALRSLLLNVIPEGEAEKEANCRPCPVMEL
ETDGADVHCSPDEKAQNSEYYACSHSLSDLNESVADLFSGEKAAGVNAKCSAKEAGGFER
SPADNVGRGCMMSLDITEFELQMLERQAMEEKLDEAAFINSKALNSVDEGADLSYVIESD
EELESEMLKSSEELDRDIASEAQPIVGTRRISQTEHNRSLEDDEDEEGIEEEEEEWDWSI
PEPNSKHIRCLKKYFGHPNFKPVQWKVVYSVLQERRDNLVVMATGYGKSLCYQFPPVYTR
GIGIVISPLISLMEDQVLQLKIANIPACFLGSAQFQNVLQEVKKLDNNKGISLIAVDEAH
CISEWGHDFRSSYRTLGSLKRMLPNVPIVALTATASPSIRQDIVRSLGLKNPQITCTSFD
RPNLYLDVSRKTGNMSRDLQQFLVKKKAFTFEFEGPTIIYCPSRKATEQVAAELCKLGIV
CDTYHAGMGIKARREVHHRFMRDEIQCIVATVAFGMGINKPDIRKVIHYGAPKEMESYYQ
EIGRAGRDGLPSTCHVVWTPADMNINRHLLNEIHSTKFREYKLKMMAKMEKYLTSNSCRR
KIILSHFEDKQLRKASSGIMGTEKCCDKCRSSFGPLPSANLWFLNENPVFFFNTQRLPDR
FRAHRLFGTGKNRPESWWKALARQLITEGFLKESSGTNKFATSCNLSEKGRTWLNKASKE
SCQTLLLQPSEVLCSRGYTVPSYLQVKSSSIPSRERSPVQLQKRQFRERFAHEENVKIPS
ASRKSLVRQSQSRSPAKAIPAQSLQPPVSPRELELQGVLYGKLVAARQKLATARDIPPAV
LATNKILLDLAKLRPTTMLNLKRIDGVSEAKSSMLAPLLDIVQEFAQINKLEVDKFSSLD
SNAEQKLAFQKKSVCSTLEDSVHITYSVFQEQNMTLRKVANNRCLPTAVVGTHLCQALKA
GYPVDTERAGLTPQIQKMITDVIRNPPINSDLSQLKAIRELIPPDVQPYLINMTVTLLEK
NSDSQQSAAQCSSGPETRPVHPGQAQSSRELPKTKVETAEDDQLTWIEAEATPVKKSEAL
SKQPVASAHRAPSQQTSISLTSWNQNALDADMEDLFSDSQSQNMSQSSKRKLPEWFEAPQ
RIGSSTVTNKKSKKGKGLFS
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcagcgtgaactgcctggatggatggctggaggaaatgatggtgaagctggg
gaacatgaccagaaatcttggatcaagaaaaatgctgcagaaaacagtcttcctttgcta
gagttcaaaggttcaatcatctacagttatgaagccaatgactgttcttttctgtcagag
gatatcagaacaagcttagaagaaggctctgctgttggatttgatattgaatggcctcca
accttctccaaagggaaagtggggaaagttgcagtcatccagctgtgtccctcagagaaa
aaatgttacttgtttcatgtatcttctatgtccagtaagtcccagagattatgtgatctt
ttattatattaccttaccaaccattacagagtcgttgtagcacctgacgaagaaacccct
gattctacaaaattgaaatgttgtgaaaagtggagtctggatggcctggtgaaacacttg
ttcatgcaccgattgtttaaggaaaattctgtccgctgcagtaactggaatgaatttcca
cttgacgaggaccaaaagatgtatgcagctaccgacgcctatgtgggcctcttgatctac
cagaaactgattacaatggagtttagccacaattcaacacctaatttaaaaagagaacag
gtgcagctgccctctgatattaagaaaaaactgagcactatatcctgtgaaatggaggat
ttggctaatgaggttcctgacacgtttgattgtttgaacagcaatatgcaaagagctgca
agtattctgaatgaaatatctgaaaaattgtgtgccttaagaagcctgttgctcaatgtt
atacctgagggagaggcagaaaaggaagctaactgcagaccctgtccagtaatggagtta
gaaacagatggtgctgatgtacactgcagtccggacgagaaagcacaaaattctgagtat
tatgcatgctcccactccctctccgacttaaatgagtctgtggcggatctatttagtggt
gagaaggctgcaggtgtgaacgcaaaatgttctgcaaaggaagctggaggtttcgaaagg
agccctgctgataatgtgggtagaggttgcatgatgtctttggacatcactgaatttgaa
ttgcagatgctggagcgccaagccatggaagaaaaattagatgaagctgctttcataaac
agcaaggctttaaactcagtggatgaaggagcagacctgtcttatgtgattgaaagtgat
gaagagctggagagtgagatgctgaagtcttctgaggaactggacagagatattgcttct
gaagctcagcccatagttggtacgaggaggatttctcaaacggagcataatcgttccctg
gaggacgatgaagatgaggagggcattgaggaagaagaggaggagtgggattggtccatt
ccagagcctaattccaagcatatcagatgtctgaagaagtattttggacatcctaatttc
aagccagttcagtggaaggtggtgtattcagtcctacaggaaaggagagataatcttgtt
gtcatggcaactggctatgggaagagcttgtgttaccagtttccaccagtttacacaaga
ggtattggaatagtaatttcgcctctcatctccttgatggaagaccaagtactgcaactt
aaaattgcaaacattccagcttgctttcttgggtctgctcagtttcaaaacgttctccag
gaagtaaaaaaactagataacaataaggggatttcactcatagctgtggatgaggctcat
tgcatctctgagtggggtcatgactttagaagctcctatagaactttgggctctttaaaa
aggatgcttccaaatgttcctattgttgccctgactgcgacagctagcccttccatccgc
caggacattgttaggagtcttggtctgaagaacccacagatcacttgcactagttttgac
cgaccaaacctgtacttagatgttagtcgcaaaacagggaatatgtctcgggatctgcag
cagtttctagtcaaaaagaaagcgtttacttttgagtttgaagggcctaccataatctat
tgcccttcacgaaaagcaacagaacaagtagctgcagaactttgcaagctaggcatcgtc
tgtgacacttaccatgctggtatgggaatcaaagcgagacgagaggtccaccacaggttc
atgagagacgaaattcagtgcattgtagctactgtagctttcggaatggggatcaacaag
cctgacattcgtaaagttatccactatggggcgcctaaggaaatggaatcgtactaccag
gagattggtagagctggacgggatggcttgccgagtacttgtcatgtagtgtggactcca
gctgacatgaacataaaccgccacttgctgaatgagatacatagcacaaagtttcgtgaa
tacaagttgaaaatgatggcaaagatggaaaaatacttaacctcaaactcttgcagaaga
aagatcattttgtctcattttgaagacaaacaactacggaaggcaagctctggcatcatg
ggaactgaaaaatgctgtgataaatgcaggtccagctttggtccattaccttcagcaaac
ctctggttcttgaatgagaaccctgttttcttttttaacactcagcgtttgccagaccgg
ttccgagcgcaccgcctctttggcactggtaagaatcgccctgagagctggtggaaggct
ttggcacggcagctcattacggagggcttccttaaggaaagttcagggaccaacaagttt
gcaacaagctgcaacctgtcagaaaagggtagaacatggctcaataaagctagtaaagaa
tcttgccaaacccttttgctacaacccagtgaggtgctctgctccaggggctacactgtg
ccaagttatctacaggttaagtcatcatctatcccatcccgagagagatctcctgtacag
ctgcagaaaagacagtttcgtgagaggtttgctcatgaagaaaatgttaaaattccaagc
gcttcgaggaaaagtttggtgcgtcagtcccagtcaaggtctccagctaaagctatacct
gctcagtccctacagcctcctgtttcacccagggaactggaactccagggtgtactctat
ggcaagctggtagcagccaggcagaagcttgccactgcacgagatatccctccagcagtg
ctggctacaaacaagatactgttggatctggccaaattaaggcccactactatgttaaac
ctgaagagaattgatggcgtatccgaagccaaatccagtatgctggctcctctcctggac
attgtccaggagtttgctcaaattaacaagctagaggttgacaagttttcaagtttagac
tctaacgcggaacagaaactagcattccaaaaaaaatctgtttgcagtactcttgaggac
tctgtccatattacctattcagtgttccaggagcaaaatatgacactgaggaaggtcgct
aacaacaggtgtttacctactgcggttgttggaactcacttgtgccaggcactgaaagct
ggttatcctgtggacacagagcgtgcaggccttacccctcaaattcaaaaaatgatcact
gatgtcatccgcaaccctcccattaactcagatctaagccaactgaaagctattagagaa
ttgattcctccagatgttcagccttacctcatcaatatgacagtcacgctgctggagaag
aactcggacagccaacaatcagcagcacagtgtagctctggacctgaaaccaggccagta
catccagggcaggcacagtcaagcagggagctcccaaagaccaaagtggaaactgctgaa
gatgaccagttaacctggattgaggcagaggccacgccagtaaagaagagtgaggccctc
tcgaagcagcccgttgcctctgctcatagagctccaagccagcaaacttccatcagcttg
acttcctggaaccaaaatgcactggatgcagacatggaggatctattcagcgactcccag
tcacagaacatgagccagtcttcaaaaagaaaattaccagaatggtttgaggctccacag
agaatcggctcctccacggttaccaataagaaaagtaaaaaaggcaaaggcctcttcagt
tga
DBGET
integrated database retrieval system
