Latimeria chalumnae (coelacanth): 102350152
Help
Entry
102350152 CDS
T02913
Symbol
APP
Name
(RefSeq) amyloid beta precursor protein
KO
K04520
amyloid beta A4 protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102350152 (APP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcm01002
]
102350152 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcm00535
]
102350152 (APP)
00536 Glycosaminoglycan binding proteins [BR:
lcm00536
]
102350152 (APP)
Peptidases and inhibitors [BR:
lcm01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
102350152 (APP)
Proteoglycans [BR:
lcm00535
]
Cell surface proteoglycans
Others
102350152 (APP)
Glycosaminoglycan binding proteins [BR:
lcm00536
]
Heparan sulfate / Heparin
Others
102350152 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APP_E2
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Gluconate_2-dh3
SnoaL_6
Motif
Other DBs
NCBI-GeneID:
102350152
NCBI-ProteinID:
XP_006011468
Ensembl:
ENSLACG00000001469
LinkDB
All DBs
Position
Un
AA seq
642 aa
AA seq
DB search
MSCFIAVGEFVSDALLVPDKCKFLHQERMDVCESHLHWHTVAKESCSEKSMNLHDYGMLL
PCGIDRFRGVEFVCCPAEDSERADSTDAEEDDSDVWWGRADTDYPEGSDEKMAEEEEEDD
TADIEEDNDDDEDDDDDDDDDDDDEIEDEMDDQYEEATERTTSIATTTTTTESVEEVVRE
VCSEQAETGPCRAMIPRWYFEAEEGKCVQFIYRGCGGNRNNFENEEYCMAVCGTVLPTTA
ASTPDAIDKYLETPGDENEHSHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADK
KAVIQHFQEKVESLEQEAASERQQLVETHMARVEAMLNDRRRIALENYITALQADPPRPR
HVFNMLKKYVRAEQKDRQHAKKHFEHVRMVDPKKAAQIRSQVMTHLRVIDERMNQSLSLL
YKVPAVAEEIQEEVDELLQKEQTYSSDILANMINEPRISYGNDALMPYMTETKTTVELLP
VDGEFSLEDIQPWHRFGVDTVPANTENEVEPVDARPAADRGLTTRPGSGLTGIKTEEISE
VKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGIVIATVIVITLVMLRKKQY
ASIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgtttcattgcagtgggggagtttgtaagcgatgccctgctggtcccagataag
tgcaagttcctccaccaagagaggatggatgtgtgcgagagccatctccactggcacact
gtcgccaaagagtcctgcagtgagaagagcatgaacctgcatgactacggcatgctgttg
ccctgtggcattgaccgcttccgtggggtggagtttgtttgctgcccggctgaggacagc
gagcgagcagattccaccgacgcagaggaagatgactctgatgtctggtggggcagagca
gatactgactatccagaaggaagtgatgagaaaatggctgaagaagaagaggaggacgat
actgctgacatagaagaagataacgacgatgatgaggatgacgatgacgacgacgatgat
gatgatgacgatgaaattgaggatgagatggatgaccagtatgaggaggctactgaacgg
accaccagcattgcaaccaccactacaaccactgagtctgtggaggaggttgtgagagag
gtctgctctgagcaagccgagacggggccatgccgagccatgatcccccgctggtacttt
gaagcagaagaaggaaagtgcgtgcagttcatttacagaggctgcggtggaaacaggaac
aactttgagaacgaggagtactgcatggcagtctgtggtacagtccttcccacgacagct
gctagcactcctgacgccattgacaaatacctggagacccctggtgatgagaatgagcac
tcgcacttccagaaggccaaggaaaggcttgaggccaaacacagagagcgcatgtctcag
gtcatgagagagtgggaggaggcagaacgtcaggctaagaacttgccaaaagcagacaag
aaggctgttatccagcacttccaagagaaagtggagtccctggaacaagaggcggcaagt
gagaggcagcaactggtggagacgcacatggcccgagtggaggcaatgctcaacgatcgc
cgccgcattgcgctggagaattacatcactgcactgcaggctgatccacccaggccccgt
catgtcttcaacatgctgaagaagtacgtgcgggctgagcagaaggaccgccagcatgcc
aagaaacactttgagcacgtccgtatggtggaccccaagaaagctgctcagatcagatct
caggttatgactcacctgcgagtgattgacgaacgtatgaaccagagcctgtcattactc
tacaaagtgcccgcggttgccgaggagattcaggaggaagtcgatgagctacttcagaaa
gagcagacttactccagtgacatactggctaacatgatcaacgagcccaggatcagctat
ggaaacgatgcccttatgccatacatgactgaaaccaagacaacagttgaattgctgcct
gtggacggtgagttcagcctggaagatattcagccttggcaccgttttggtgttgatact
gtgccagcgaacacagagaatgaagttgagccagtcgatgcccgtccagctgcagacaga
ggactgaccacacgaccaggttctgggctgactggcataaagacagaagaaatctcagaa
gtaaagatggatgctgagttccgacatgattctggatatgaggtgcatcatcagaaacta
gtgttctttgcagaagatgttggctcaaacaaaggggcaatcattggcctgatggtggga
gggatcgtcatagcaacagtgattgtcatcaccctagtgatgctgaggaagaaacagtat
gcttccatccaccatggagtagttgaagtggatgctgcagtgactccagaggaacgtcac
ctctccaagatgcagcagaacggctacgaaaacccaacttacaagttctttgagcagatg
cagaactag
DBGET
integrated database retrieval system
