Latimeria chalumnae (coelacanth): 102350328
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Entry
102350328 CDS
T02913
Symbol
SEC31B
Name
(RefSeq) SEC31 homolog B, COPII coat complex component
KO
K14005
protein transport protein SEC31
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102350328 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102350328 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lcm02044
]
102350328 (SEC31B)
Membrane trafficking [BR:
lcm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102350328 (SEC31B)
Secretion system [BR:
lcm02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
102350328 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
EIF3I
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_HPS5
TPR_Sec16
Prp18
Beta-prop_SPT8
Beta-prop_WDR11_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
102350328
NCBI-ProteinID:
XP_014340496
Ensembl:
ENSLACG00000018267
LinkDB
All DBs
Position
Un
AA seq
1243 aa
AA seq
DB search
MKLKEIERTANQAWSPASHHPIFLATGTSAQQLDASFSTNAALEIFELDFGDPSLDMKLR
GSLPTHNRFHKLIWGGFGMGSDGSSGVIVSGGDNGAVTLYSATKVLAGGKETIIGQNEKH
SGPVRALDFNPFQNNLLATGANDSEIYIWDLNNFSVPMTPGANSQHRETPEDIRVVAWNR
QVQHILASAHPSGKAVVWDLRKNEPIIKVSDHSNRMRCSGMEWHPEVATQLVLASEDDRM
PVIQMWDLRFATSPLKVLENHTKGILSICWSQADPELLLSSAKDNKILCWNPNTGEVIYE
LPTSNQWCFDVQWCPRSPVVLSAAAFDGRISIYSVMGGNLVAQQLSQADKISSSFNNLDP
FGTGQPLPPLQVPQHVAQTTVVQPLKKPPKWIRQPVGACFAFGGKLITFDNPKAAPQQAQ
QLFPRQVFISQVTTETQFLQRSNELQAVLQSSDFINYCQSKIRTAQSEFERSVWNFLKVN
FEQDARSKFLNLLGYSKEEVKKKISSCLGHSLKNKDQETDTSDLEEKLQDLPDSTAGGDA
STSSADFFDHIPENRPKFEIPIAADTDGLIGQALLIGSFEEAVELCLSDGRFADAIILAV
AGGEGLLRKTQQKYFINQKSKITSLLSSIVTHSWREIVQSCDLGNWKEALAALLTYAKAE
EFSTLCDTLGSRLEVEGDGTQRVQACLCYICSGNVEKLVQCWVKNHESSLPLALEDLVEK
VMMLQKSMEVQQGTEVPIKGSVLAEKLTQYASLLAAQGSLAVAMSYLPANTNESSVLQLR
DRLFHSQGEAVLGLQPPPFPFAQVQVDKGPHVAPSAPVTGQPTEVQRPTPKPFQQAPHQP
GFTPLVPAQPSVQPSLPPVFSPPASAAAPPPSPSFVPLSSAAPSGAAGTAANVYSRVGML
PSYPKHPTSSPGTAFLQPQPFSYQGIPLSGTTAYPSPPSLPASTLSGPSFSTVPSSGPVV
PGSPLRSPSYQATNPLPPPSQPGFHPPVPQGLPSTPTSTPVLQHLYSYPAGAGYTQGPLG
MPSLSFTSTTAPPPPPPTGYFPWLENRSDEPGPRDGWNDPPNVHGMLRRKKLPENYTAPA
PITAPVMSFPAEPQPLHSQVPSAKEVVFAPPGAPKEASMQPQSQLPAEKIERKAIPSEHL
FLKTTFDKMVQCCYLAAGDPQTKRKLDDATKRLENLYDKLREHTLSPNILGGLHEIAHCI
ECRNYQQALSIHTQVVSSSNFSEISAFMPVLKVVMTVANKLNV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaaagaaattgaaagaacagctaatcaggcttggagccctgcctcccaccat
cccatcttcctagcaacaggaacctctgcccagcagctagatgcctccttcagcacaaat
gcggcactggaaatctttgagttggacttcggagatccttcattggacatgaaactgaga
ggatctctccctacacataataggttccataaactgatctggggtggctttggaatgggc
tctgatggctcttctggggtgattgtatctggaggggacaatggagctgtaactctgtac
agtgccactaaagtgctggcaggagggaaagagaccatcattggacagaatgagaagcat
tccggtcctgtccgagcgctggactttaatcctttccagaacaaccttttggcaactggt
gccaatgattcagagatttatatttgggacctaaataatttcagtgtaccaatgactcca
ggagctaattcacagcatcgtgagactccggaggatatcagagttgtagcctggaatcgt
caagtacagcacatcttggcatcggcacatcccagtgggaaagctgttgtttgggatttg
agaaaaaatgagcctatcatcaaagtcagtgatcacagcaacaggatgcgttgttctgga
atggaatggcaccctgaagttgcgacccaactggtgctggcatcagaggatgatcgtatg
ccagttattcagatgtgggacctgaggtttgctacgtctcctctaaaggtgttagagaat
cacaccaaaggtatcttgtctatctgttggagccaggctgatccagagctgttgctcagt
agtgccaaggataataagatcttgtgctggaacccgaacacgggagaggtgatctatgag
ttgcccaccagtaatcagtggtgctttgatgtccagtggtgtcctcggagcccagttgtc
ctctcggctgctgcctttgatggtcggatcagcatttactctgttatgggtggcaatttg
gtggctcagcaactcagccaggctgacaagatctcctcgtcctttaataacctggatccc
tttggaacaggccagcccctgcctccgcttcaggtcccccagcacgttgctcagaccaca
gtggtccaacctttaaagaagccacctaaatggatccggcagccagtaggagcctgtttt
gcttttggagggaagctgatcacttttgacaatcctaaagctgccccacagcaagcgcag
cagcttttcccgcgtcaggtatttatcagccaggttaccacggaaacccagttcctgcag
cgttccaatgagctacaggctgttctccagtcctccgactttatcaactactgccagagc
aagattcgcacggcccagtctgagttcgagagaagcgtttggaattttctcaaggtaaac
tttgaacaagatgccagaagtaaattcctaaatctcctaggatatagtaaagaggaggtt
aaaaagaagatttcttcctgtttgggtcacagtctaaagaataaagaccaggaaactgat
accagtgatcttgaagaaaagcttcaggacctgccggattccacagccggaggagatgcc
tctacctcatctgcggatttctttgaccacattcctgagaatcggcccaaatttgagatc
cctatagcagcagacacagatggtttgatcggccaggctttgctcattgggagttttgaa
gaagccgtggagctgtgcctcagtgacggccgcttcgctgatgccatcatcttagcagtt
gcagggggagagggactgctcaggaaaacacagcagaaatacttcataaaccagaagagc
aagatcacatcattgctgtcttccattgtcacacacagctggagagagattgtgcagtcc
tgtgacttagggaactggaaagaagcgttggcagcacttctgacttatgctaaggctgag
gagttctccactctttgtgatactctgggttcccgtctagaggtagagggtgatgggact
caacgagttcaggcttgtctgtgttatatttgttctggtaacgtggagaaactggtccag
tgctgggtgaagaatcacgagagctcactgccccttgccttggaggacctagtggagaaa
gtgatgatgttacagaagtcgatggaggtgcaacagggaacagaggtgccaataaagggc
tcagtccttgcagagaaacttacccagtatgccagcctgctggcagcacaaggcagcctg
gcagtcgcaatgagctatctgccagctaacacaaatgagtcctcagtcctgcagctacga
gacaggctgtttcactcgcaaggagaagctgtgcttggcctgcagcccccaccattccca
tttgctcaagtccaggtagacaaagggccacacgtggctccttctgcaccagtcacgggc
caaccaacagaggtgcagagacctactccaaagcctttccaacaggctccacaccaacct
ggcttcactcctctggtcccagctcagccttctgtccagccttcattgccaccagtgttt
tctcctccggcatcagcagcagcaccaccaccatcgccatcgtttgtgcctctgtccagc
gctgccccttctggagctgctggaacagctgccaatgtctactccagagtggggatgcta
ccatcgtaccccaaacacccaacctcttccccgggaactgcctttttgcaaccacagcca
ttcagctatcagggaatcccactgagtggaacaacagcatatccaagcccaccttccctt
cctgcttcaacactgtcagggccttccttctctacagtgccttctagtggtcctgtcgtg
cctggatcgccgttacggtctccttcctaccaggccactaacccactcccacctccttcc
cagcctggttttcatccccccgttccccagggtctgccttccacccctacctcaacgcca
gtgttgcagcatctttattcctacccagccggagcagggtacactcagggccctcttggg
atgccgtccttgtcgttcacatccactactgctcctccccctcctcctccaacaggatac
tttccatggctggaaaaccgtagtgatgaaccaggacctcgtgatggatggaatgatcct
cccaatgtacatggaatgctccgaaggaaaaagctccctgaaaactacactgccccagca
ccaatcactgctccagtcatgagcttcccagctgagccacagccgctccattctcaggta
cccagtgctaaagaggtcgtgtttgcaccccctggggcacctaaagaagccagcatgcag
cctcagagtcagttaccagcagaaaaaatagagaggaaagcgatcccaagcgaacaccta
tttctaaaaaccacatttgacaagatggtgcaatgttgctacctagctgctggggaccca
caaacaaaaaggaaacttgatgatgctactaaacgacttgaaaatctgtatgataaactg
agagagcatacgctatctcctaacatcttgggtgggcttcatgaaatagctcactgcatt
gagtgccggaactaccagcaggctctgagcatacacacccaggtggtcagcagcagtaac
ttcagtgagatctctgcctttatgcccgtccttaaggttgtcatgacagtcgctaacaag
ctcaacgtttaa
DBGET
integrated database retrieval system
