Latimeria chalumnae (coelacanth): 102350497
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Entry
102350497 CDS
T02913
Symbol
SAMD4B
Name
(RefSeq) sterile alpha motif domain containing 4B
KO
K27396
protein Smaug
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102350497 (SAMD4B)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102350497 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
DUF4685
Motif
Other DBs
NCBI-GeneID:
102350497
NCBI-ProteinID:
XP_005987865
Ensembl:
ENSLACG00000011679
UniProt:
H3AUE5
LinkDB
All DBs
Position
Un
AA seq
653 aa
AA seq
DB search
MMFRDQVGILVGWFKGWNECEQTVALLSLLKRISRTQARFLQLCLEHSLADCSEIHILES
DANNSAIVSQWHQEPKEKVVCLLLSHLPLLKPGNTEVKTEYMKLLQKVLAYSIESNLFIE
ESRQLLSYALIHPATALGDRNSLALWLNHLEERMSSGYPAQNRGRPETVYHPRQGSDEWQ
ADSSASDLGHSWHDKLPSRENGHLPFPSSTSVPSAMNSIGSNTNTVLPGQIHPSPLKRSM
SLVPTSQQASSDWISQEELGARSAFVPSDHAPLSPQSSVASSGSEQTEDMGLSRNTFQEE
GSGMKDVPTWLKSLRLHKYAALFSQMTYEEMMTLTEQHLESQNVTKGARHKIALSIQKLR
ERQGLLKTLEKDILEGGNLRSALQELQQIIITPIKAYTPPAATQREGHSAPPQTSGVTTS
GAVGPEKANRSADDKDPGTDTFPSQNASPCDGESAVTPIPEGDIPGQFTRVMGKVCTQLL
VSRADEENITCYLQLIEKCLAHEAFRENQKKRLLSWKQQALKLQRAFPRKAMLDVQGYRQ
QKGWAFGSNSLPTAGSVGGAAGRRAQRQFQMPPRGLPPSRMGLISPAGIGGVSPRHALNS
PGLANQGRQNLWFSNPGGSSSMPSQGRSSVQRTHSLPVHTSPQALLLFQQPGE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgtgaccaggtgggcatcctggtgggttggtttaaaggttggaatgagtgc
gagcagacagttgccctcctgtccctgctaaagaggatctcacggacccaggcccgcttc
ttgcagctgtgcctggagcattcgctcgctgactgcagtgaaattcacattctggagtca
gatgcaaacaattcagcaatcgttagccagtggcaccaagaaccgaaggagaaggtggtg
tgtctgttgctgtcacacctccctctgttgaaacctggcaatacagaggtgaagacagag
tacatgaagctgcttcagaaagtcctggcctactccattgagagcaacttgttcatcgag
gagagcaggcagttgctgtcgtacgcactcatccacccagccacggcgctgggtgacaga
aactcgctggccctctggctaaaccacctggaggagcggatgtccagtggctacccagca
caaaaccggggccggccggagacagtgtaccacccgcggcagggctcagatgagtggcag
gcagattctagtgccagtgatttggggcatagttggcatgacaagctgccttctagagag
aatggacatttgccttttccttcttccacctctgtgccatctgctatgaacagtattgga
agtaacacaaacacagtgcttccaggccaaattcaccctagccctctgaagcgctcgatg
tcccttgttcccacaagccagcaggcctccagtgattggatcagccaggaggagcttggg
gctcgttctgcatttgtcccatcggatcacgcacccctttccccgcaaagtagtgttgct
tcatcgggcagcgagcagacagaggacatgggtctgtccaggaacaccttccaagaggag
ggcagcggcatgaaagacgttcccacatggctgaagagtcttcgccttcacaaatatgca
gcacttttctctcagatgacctatgaggaaatgatgaccctcacggagcagcatcttgag
tctcagaatgttacgaagggtgcaaggcacaaaatagccctcagcatccagaagctgaga
gagaggcagggtctcctgaagactctagagaaggatatcctggagggaggaaatctgcgg
agtgcactacaagagctgcagcagataataatcacccccattaaagcttatacgcctcca
gcagccactcagcgagaggggcacagcgcacccccccaaacttccggggtcaccacctct
ggggcagtaggtcccgagaaggccaacaggtcagcagatgacaaggatccaggcacggac
actttcccatcccagaatgcctctccctgtgacggggagtctgcagtcacccccatacct
gagggggacatcccgggtcagtttacaagagtcatgggaaaagtgtgtacacagctgctg
gtatcgagagcagatgaagaaaacattacctgttacctacagctcatagaaaagtgcctg
gcgcatgaggcattcagagagaatcaaaagaagaggttgttgtcatggaaacagcaggcc
ttgaagctgcagcgagcgttccccaggaaggcaatgcttgacgtgcagggataccgacag
caaaaaggttgggcatttggttcaaattctcttcccacagctggatctgtgggcggagca
gctgggcgaagggctcagcggcagttccagatgccacctcgtgggctgcccccaagcagg
atgggattgatcagcccagcagggattggaggggtgtcacctcgacacgcactcaacagt
ccaggccttgccaaccaggggagacagaacctgtggttctctaaccctgggggcagtagc
agcatgccaagtcagggccgaagctctgtccagcggacccactcgctacccgtccacacc
tctccacaggccctgcttctcttccagcaacctggtgagtaa
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