Latimeria chalumnae (coelacanth): 102350600 Help Entry 102350600         CDS       T02913                                  Symbol SF3B1 Name (RefSeq) splicing factor 3b subunit 1   KO K12828   splicing factor 3B subunit 1 Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm03040   Spliceosome Brite KEGG Orthology (KO) [BR:lcm00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102350600 (SF3B1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:lcm03041]     102350600 (SF3B1)    03036 Chromosome and associated proteins [BR:lcm03036]     102350600 (SF3B1) Spliceosome [BR:lcm03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     102350600 (SF3B1)  Complex B     102350600 (SF3B1)  Complex C    U2 SnRNP specific factors     102350600 (SF3B1) Chromosome and associated proteins [BR:lcm03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     102350600 (SF3B1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_ECM29 HEAT_EF3_N HEAT_EZ Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG TALPID3 Adaptin_N DUF2298 Motif Other DBs NCBI-GeneID:  102350600 NCBI-ProteinID:  XP_005989585 Ensembl:  ENSLACG00000014832 LinkDB All DBs Position Un AA seq 1292 aa AA seqDB search MAKIAKTHEAIEAQVLEIQGKKAALEEAKGVGLDSTGYYDQEIYGGSDSRFEGYVTSIAA NEQEEDDVDEYPNTTLLGQKKPGYHAPAALLNDIPQSTEQYDPFAEHRPQKIAEREDEYK ARRTQMIISPERHDPFADGGKTPDPKLNARTYMDVMREQHLTKEEREIRQQLAAKAKSGD LKVVNGAAAAAAAAAAAAAQQSAKRKRRWDQTADQTPTATPKKVSSWDQADTPGHTPSQS RWDETPGRAKGSETPGATPSTRMWEPTPSHTPAGAATPGRDTPGHATPGHGGATSSVRKN RWDETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTP VLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEG YKVLPPPAGYVPIRTPARKLTATPTPLGGLTGFHMQTEDRTMKSISDQPSGNLPFLKPDD IQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPL FNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARV EGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAV CKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAA LAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVML ILIREFQSPDEEMKKIVLKASRSSFIFSYGKGLGEKKHIYLVDTTVELANKVGAAEIISR IVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLN GFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMG HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQ ENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHD VLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLS FLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHVSLGVYGFGCEDALNHLL NYVWPNVFETSPHVIQAVMGALEGLRVALGPCRMLQYCLQGLFHPARKVRDVYWKIYNSI YIGSQDALIAHYPRVYNDEKNTFIRYELDYIL NT seq 3879 nt NT seq  +upstreamnt  +downstreamnt atggcgaagatcgccaagactcacgaagctatagaggcacaggttcttgaaatccaaggc aagaaggctgcacttgaggaagctaaaggagtaggccttgactccacaggttattatgac caggagatttatggtggaagtgacagcaggtttgaagggtatgtgacttcgattgctgca aatgagcaggaagaagatgatgtcgatgaatatccaaacacaactttgcttggacagaag aagccgggataccatgccccagcagctttgctcaacgatataccacaatcgacagaacag tatgacccatttgctgaacatcggccgcagaagattgcagagcgagaagatgagtacaaa gctcgtagaacacagatgatcatttcacctgagcgccatgatccctttgcagatggagga aaaacaccagatccaaagctcaatgccaggacttacatggatgttatgcgtgaacagcac ttgacaaaagaagagagggaaattagacagcagctagcagcgaaagcaaaatcgggggat ctgaaagttgttaatggagcagccgccgccgccgcagcagcagcagcagcagcagctcag cagagtgcaaagcgtaagcgtcgttgggatcaaacagctgatcagacccctactgctaca cccaagaaagtatccagctgggaccaagcagatactcctggtcatactccctctcagagc cgatgggatgaaactccaggtcgtgcaaagggaagtgaaacacctggtgcgactccaagc acaaggatgtgggagcctactcctagtcacacgcctgcaggggctgcgacaccaggccgt gacacaccaggccatgcaacgccaggccatggtggcgcaacatctagtgtgcgcaaaaac agatgggatgaaactccaaagacagaaagagatacccctggacatggcagtgggtgggct gaaactcctcgtacagatcgtggtggagattccattggtgaaacgccaactccaggagca agcaaaagaaaatcccgttgggatgaaacaccagctagccaaatgggtggtagtactcct gtactgacacccggcaaaacgccaattggaacaccagccatgaacatggcaactcccaca cctggtcacttaatgagcatgacacctgagcaacttcaggcttggcgatgggagagagaa attgatgaaagaaaccgccctctttctgatgaagagttggatgccatgtttccagaaggg tataaggttcttcctcctcctgcaggatatgttcccattcgtactcctgctcgaaaactg accgcaacaccaacaccactgggaggcttaactggtttccacatgcagactgaagataga accatgaaaagtatcagtgaccaaccttcaggaaacctcccattcttaaaaccagatgac atacagtactttgataaattactggttgatgttgatgaatcgacattaagtccagaggaa caaaaagagagaaagataatgaagctgcttctaaaaataaaaaatggcacaccacccatg agaaaggctgctctgcgtcagattactgataaagctcgtgaatttggggctggtccattg tttaaccagattcttcccctgctgatgtctccaacacttgaagatcaggagcgtcacttg ttggttaaagttattgacagaatcctctataaactggatgacttagttcgaccatacgta cacaagattcttgtggtcattgaacctttgctgattgatgaagactactatgctagagtg gaaggcagagaaatcatttcaaacttggctaaggctgctggtctggctactatgatttcc accatgcgtcccgatatcgataacatggatgaatatgtccgtaatacaaccgctcgggcc tttgctgttgtggcctctgcattgggaattccttcgctgcttcctttcttgaaagctgta tgtaagagcaagaaatcttggcaagccaggcataccggcatcaagattgtgcagcagatt gctattctgatgggttgtgccatcttgcctcatctcagaagtttagttgaaattattgag catggtctagtggatgaacagcagaaagtccgtactataagtgctttggctattgctgct ttggctgaggctgccaccccctatggtattgagtcctttgattctgtcctcaagcccctg tggaaaggtattcgccagcacagaggcaaaggtttggctgctttcttaaaagccatcggt tatcttattccacttatggatgctgaatatgccaactattatactcgagaagtgatgttg atccttattcgagaattccagtctcctgatgaagaaatgaaaaagattgtgttgaaggcg agtagaagttcctttattttctcttatggaaaaggcctgggggaaaaaaagcacatctat ttggttgatacaactgtggagctggcaaacaaagtgggagctgcagaaattatctccagg attgtggatgacctaaaggatgaagctgaacaatacagaaaaatggtgatggaaaccatt gagaagatcatggggaacctgggagcagcagatatagaccacaagttggaggaacagctt attgatggtatcctgtatgcattccaggagcagaccacagaggattctgtgatgttgaat gggtttggaactgtggttaatgctcttggaaaacgtgtgaagccatacctgccacagatc tgcggtacagttttgtggcgattgaataataaatcggctaaagttagacagcaggctgct gatttgatctctcgcacggcagttgtcatgaagacttgtcaagaggaaaaactgatggga catttaggtgttgtcttgtatgagtaccttggtgaagaataccctgaagtattgggtagc attttaggagccctaaaagctattgttaatgtaataggtatgcacaagatgactccacca atcaaagatttgttaccaagacttacacccattttgaagaaccgacatgagaaagtacaa gaaaactgcattgacctggttggacgtattgccgacagaggggcagagtacgtgtctgca agagaatggatgaggatctgctttgagttgttggagctgttaaaagcacacaaaaaggct atcagaagagcaactgtaaacacctttggttatattgccaaagctattggacctcatgat gttttggctacccttctaaacaacctaaaagtacaagaaaggcagaacagggtgtgtaca acagttgcaattgccattgtggcagaaacctgttcaccattcactgtgcttcctgcactg atgaatgaatacagggtgccagaactgaatgttcagaatggtgtgctgaaatcgctttcc ttccttttcgagtatattggtgaaatgggaaaagattacatttatgctgtcacaccattg cttgaagacgctttgatggacagagatcttgtacatagacaaacagctagtgcagttgta cagcatgtttcccttggcgtttatggctttggttgtgaagatgcattgaaccatttactg aactacgtgtggcccaatgtatttgaaacttctcctcatgttatccaagcagttatgggg gcattggaaggtctgagggttgctcttggtccatgcagaatgttgcaatactgtttacag ggtttgttccatccagccagaaaggtcagagatgtgtactggaagatctacaactccatt tacattggttcacaggatgccctgatagcacattacccacgagtctacaacgatgaaaag aacacgtttattcgttatgagcttgactacatcttataa

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