Latimeria chalumnae (coelacanth): 102350646
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Entry
102350646 CDS
T02913
Symbol
SMARCA2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102350646 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102350646 (SMARCA2)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102350646 (SMARCA2)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102350646 (SMARCA2)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102350646 (SMARCA2)
Chromatin remodeling factors
BAF complex
102350646 (SMARCA2)
PBAF complex
102350646 (SMARCA2)
GBAF(ncBAF) complex
102350646 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
102350646
NCBI-ProteinID:
XP_006003609
LinkDB
All DBs
Position
Un
AA seq
1492 aa
AA seq
DB search
MHEKGMGEEMLYGQMKGISMRPSHPGMGPPQSPMDQHSQGYMSPHPSPMAPEHVPSPMSG
GGPTPPQMPPGQPGAMMPGDPQVMAQQNRGPSPFSSIQLHQLRAQILAYKMLARGQPLPE
NLQLAVQGKRTLPGMQQQQTPSAYNRSPGIGLHPMGVPPGGPGPGPAAGIPTHSPSMAPK
TWTEGQAGDMGAVNTPQKLTVPAPSGRPSPAPPVAQPPAAMPGTSVPQPNPGQPSPIIPP
PQKQNRITPVQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELK
ALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQE
RKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKE
RMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKMKKKK
KKKKVEENTEGIGSGLGPDGEPIDESSQMSDLPVKVIHTETGKVLHGVDAPKSSQIDAWL
EMNPGYEVALRSDSEESDSEYEEEEDDEEQPKLDAEEKMIIDPNSEEVSETAAKHIIESA
KQDVDDEYTLQAEEARESQSYYAVAHAVNERVEKQSSLLINGSLKHYQVQGLEWMVSLYN
NNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWIYEFDKWAPSVV
KIAYKGTPALRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH
CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT
LERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVVKCDMSALQKILYRH
MQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPFMFQHIEESFAEHLGYANGII
NGGDLYRASGKFELLDRILPKLRSTNHRVLLFCQMTSLMTIMEDYFAFRSFMYLRLDGTT
KSEDRAALLKKFNEKDSPVFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRA
HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGHERRAFLQAI
LEHEEENEEEDEVPDDETLNQMIARNEEEFDLFMRMDLDRRREDARNPKRKPRLMEEDEL
PSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTERQWLRAIEDGNLEEMEEE
VRLKKRKRRRHVDKDTTKEDGEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDS
SGRQLSEDFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNA
QTFNLEGSQIYEDSIVLQSVFRSARQKIAKEDESEEESNDDDDDDDDDESESESKSVKVK
IKLGKKDEKSREKGKSRKRQRAGKARPVVSDYDSEEDQDDNDQSEGSGSDDE
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagaagggaatgggagaagaaatgctttatggtcaaatgaagggtataagcatg
agaccatctcatcctgggatgggcccacctcagagccccatggatcagcacagtcaaggt
tacatgtctcctcacccatcgccaatggctccagagcatgttcccagccctatgtctgga
ggtggtcccactccaccccagatgccaccaggccagccaggagccatgatgcctggggat
ccccaagtgatggcccaacagaacagaggtccttcccctttcagttcaattcagcttcat
cagctacgcgctcaaatcctagcgtacaaaatgttggctagaggacaacccttacctgaa
aatctgcagcttgctgttcaggggaagagaacacttcctgggatgcaacagcagcaaact
ccatcagcatacaacaggtcaccaggcattgggttgcatcccatgggagtcccccctggt
ggcccaggaccaggaccggcagcgggaataccaactcacagccctagtatggctcctaaa
acatggacagaaggccaagctggagatatgggtgcggtgaacactccacagaagctcact
gtaccagccccaagcggcagaccttcccctgcacctccggtggctcagcctcctgctgcc
atgcctggtacttctgtaccacagccaaaccctgggcagccttcccccattattccacct
ccacagaaacagaatcgtatcactccggtccagaaaccacaggggctggatcctgttgag
atcctacaggagcgtgaatacaggctgcaagctcgaattgcccatagaatccaagagctg
gagaacttgcctggttctctaccaccagatttacgaaccaaagccactgttgaattgaag
gcactacgacttcttaactttcagcggcagttaagacaagaggtggttgcctgcatgcgt
cgtgacaccactttggagactgcactaaattcaaaggcctacaaacgaagcaagcgccag
actttaagggaggctcgcatgacagaaaagctggagaaacagcagaagattgagcaggag
agaaaacgcaggcagaaacaccaggaatatctcaacagcatactacaacatgcaaaagac
ttcaaggagtatcaccgttctgttgcggggaaaattcagaagctgtccaaagctgttgct
acctggcatgccaacacggagcgtgagcagaagaaagaaactgagagaattgagaaagag
agaatgcggaggctgatggctgaggatgaagaaggctaccgtaagctgattgaccagaag
aaagatcgacgtctggcctacttgctgcagcagactgatgagtatgttgctaaccttact
aacctggtttgggagcacaaacaagctcaggctgctaaggagaaaatgaagaagaagaag
aaaaagaagaaggtagaggaaaatacagaaggaattgggtctggtctgggtcctgatggt
gagccaattgatgagagcagtcagatgagtgatcttccagttaaagttatccatactgaa
acaggcaaagttcttcatggagttgacgcaccaaaatccagtcagatagatgcctggcta
gaaatgaaccctgggtatgaagttgctctaaggtcagacagtgaagagagtgattctgaa
tatgaagaggaggaagatgatgaggaacaacctaaacttgatgctgaagagaagatgatc
attgatccaaacagtgaagaagtttctgagactgctgctaagcacattattgagtctgcc
aaacaggatgtggatgatgaatataccttgcaggcagaagaagcgagggaatctcagtca
tactatgctgtggcccatgcagtcaatgaaagggttgagaagcagtcttcactgttgatt
aatggtagtctaaagcactatcaggtccagggtctagagtggatggtttcactgtataac
aacaacctaaatggaattctggctgatgaaatggggctgggaaagaccatccagactatt
gctctcatcacatatctgatggagcataagagactaaatggaccctatctcatcattgtt
cccctttcgaccttatccaactggatctatgaatttgacaaatgggctccttctgtagtg
aagattgcatataagggtacacctgcactgcgtcgctcccttgttcctcagcttcggagt
ggaaaattcaatgttcttttgactacatacgagtacatcattaaagataaacacattctt
gcaaagattcgttggaaatacatgattgtagatgaaggacatcgtatgaagaaccatcat
tgtaaactgacgcaagttttaaatacccattacgttgctcctagacgactcctcctcact
ggaactccactgcagaacaaactgcctgagctatgggcccttctgaacttcctcctccct
actatctttaaaagctgcagcacctttgagcagtggtttaatgctccttttgccatgacc
ttagaaagggtggacttgaatgaggaagagaccatcttgattattcgtcgtcttcacaaa
gtgctccggcccttccttctgagaagactgaaaaaagaagtagaatcccaactgccagaa
aaggttgaatatgtggtcaaatgtgatatgtcagccctgcagaagattctatatcgtcac
atgcaagcaaagggcatccttcttactgatgggtctgaaaaagacaagaagggtaaaggt
ggagccaagacccttatgaatactattatgcaactaaggaagatatgcaaccatcctttt
atgtttcagcacattgaggagtcctttgctgaacatttaggctatgctaatggcatcata
aatggaggtgacctgtatcgagcctcaggaaagtttgagctgctggaccgaattctgcct
aagctacgatctactaaccatagagtcttgctcttctgtcagatgacatcactgatgaca
atcatggaagactattttgctttccggagttttatgtatttgagacttgatggtacaaca
aaatcagaagatcgtgctgcattgctgaaaaagtttaatgagaaggattcgccggtcttc
atcttcttgctgagtactagagcaggaggactgggcctgaaccttcaggcagctgacact
gttgttatctttgacagtgattggaatcctcatcaggacttgcaggctcaggacagagct
catcgcattggtcagcagaacgaggtcagggtgctgcgcctctgtaccgtaaacagcgtg
gaggagaagattctcgcggcagccaagtataaactcaatgtcgaccagaaggttattcag
gctggcatgtttgatcaaaaatcttcaggtcacgaacggagagctttcctgcaagccatt
ctagagcatgaggaggaaaatgaggaagaagatgaagtccctgatgatgagaccctgaac
cagatgattgctcggaacgaagaggaatttgatctctttatgcgaatggacttggatcgt
cgtagagaagatgctcgcaatccaaagcgcaaaccacgcttgatggaagaggatgagctg
ccctcttggattattaaagatgatgctgaagtggaaaggctcacctgcgaagaggaggaa
gagaagatatttgggagaggttctcgtcagcgaagagatgtggactacagtgatgcactc
actgagaggcagtggctaagggctattgaagacggtaatttggaagaaatggaagaggag
gtccggcttaagaaacgcaagcgcagaagacatgttgataaggatactacaaaggaagat
ggagaaaaggctaaaaagagaagaggcagacccccagcagagaaactgtctccaaatccg
cccaaactgaccaaacaaatgaatgctattattgatactgtaataaattacaaggacagt
tcagggcggcaactaagtgaagatttcattcagctaccctccagaaaagaactgcctgaa
tattatgagctaatcagaaaacctgtggacttcaaaaaaataaaggaaagaatacgcaat
cataaatacagaagtcttggtgacctagagaaggatgtcatgttactttgccacaatgca
cagactttcaacttggagggctcacagatctatgaggattccattgtactacagtcagtg
tttagaagtgctaggcaaaagattgccaaagaagacgaaagtgaggaagaaagcaacgat
gatgatgatgacgacgacgatgatgaatcagagtctgaatccaaatctgtaaaagttaaa
atcaaacttggaaagaaagatgagaagagtcgcgagaaaggaaaaagcaggaagcgacag
agagctggaaaagccaggcctgttgtgagtgattatgacagtgaagaagatcaagatgat
aatgaccagtcagaaggaagcggaagtgatgacgaatga
DBGET
integrated database retrieval system
