KEGG   Latimeria chalumnae (coelacanth): 102350761
Entry
102350761         CDS       T02913                                 
Symbol
NWD1
Name
(RefSeq) NACHT and WD repeat domain containing 1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lcm04990]
    102350761 (NWD1)
Domain-containing proteins not elsewhere classified [BR:lcm04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   102350761 (NWD1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML NBCH_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Nup120_160 Beta-prop_TEP1_C NACHT Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th AAA_16 Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_DCAF12 NPHP3_N ATPase_2 nSTAND1 Beta-prop_SPT8 AAA AAA_22 APAF1_C
Other DBs
NCBI-GeneID: 102350761
NCBI-ProteinID: XP_014340452
Ensembl: ENSLACG00000018112
LinkDB
Position
Un
AA seq 1490 aa
MCDESACELLHDWFWKDENAVPPVYILQPITSHLPHYDDKTLGNQEQQKHDMKSWRDTEY
QLARLLRAAASEAEKEGLISKEQKHVYFKSVTEWEIECGLLSGREEEVNCVVFLREVEDL
QEHIKEETSSQFVDIKADGEIDMEAQELLSELKSKISSNLSKRLKVHTVQWRSDIARRKQ
KGYSKYLTSLCEQFVMEIKEQILSRVLPCNESDDEMAGVIQELCHHMALCAKKCTVFCGR
RDFLVSICESIKQSDASLHAPLVVFGPSGTGKTALVCKLSQEVRTILGENTVVVLRLLGT
SPLSSEIHSVLKSVCLQICFACGLSAPPAQVTNIYNDLVCFFHNLLAKVSEKNEKSLVLI
LDSLDQLSPADGAHRLYWLPKECPPKVHIIISTLPFEYGILHTLQGVIAGSRCYYEVKSL
SGEQGGEMLEMLMASVKRKLTPAQRSLILESFEQCGQPLLLKLAFEEARRWASYTPLTEL
QVAMTTQSAIQHLYGRLEKQHGRTLVSHALGYIVSSKNGLSEAELKDVLSLDDEVLGDIY
QYWPPPSSDVIHLPPLLWTRLRYDLGDYLVERQADGFTVLGLYHRQFIEAVQECYLSEED
KARRHSVLADFFKGTWSQGVRKPITLPSLNRSLNADRKVAAQPLWFSDKVANVRKLSELP
YHLLHAGRIEELKKEILGRMDWLVCRALNCGIKSVIGDLNLCSECIDCSEVQLVRDTFLL
LKPTVDFIEGEVDENIFYYEVPARLEFFSSSYPTLIGKLCCQCRDWCSMCQTPALVPACG
FFQPPGGPLQTTLTGFKKGVTVLELSPDRSLLVAGSQDGRMMVWSLKDIEVIHILTGHSG
EVRCVQVINEGTRAVSGSSDHSLRLWNLLTGKEVYSIQEDHAGYEVFALLQVETKKEMIY
SVSGSQVNVWHLETAEPLFHISGGSPDVRMCMAVLGPGLPLISVSEGGLLSLWDSTTGER
QGIHCLDGMSDAAPACIAVLKNQGRIAVGNTNGIALISPEGRCMMETLSSPATFLVVSED
EMLLAAGFEKFIRIFKTQPNLLSRSSCPDLDHGDAVETASFSSDQSMLMTGSQDEIIRVW
SLVKGLLLVSLDGMGVPVTALVLAGSTLVSASRSAYYLKVWNLDYNKKNKSVTPFQDRTG
LAAISHEGELVYFPKTGDKEKILVWNSLEGKTVDTLDASREVTCLEVAEMKKLLFCGLLS
GTVLVFPVNFRQDTMCIPPRKSLGPTCCIGISKQEEKLAVAYENSICVFDINPGRHYSVI
DGPIYEFSTWGPSAISSVAVLASYRVLYGMENGELCSHECKTSKVVSLDAHDSKVTCIAI
SNSERYALSGSQDTIQRLWNLDLSQWDHEMDYKGFFFQGILCAAFSHDDRYVFTGSQDRA
LKVWDISNGSLLMVQYVYATINRIVATPEGLIATTRLGYVIREKFHCPDYISAQYNPLQN
IKATYSVKSRKGAGDAPMSPAVPRNNSETASPRKDYKKQSLKSSQMCLLV
NT seq 4473 nt   +upstreamnt  +downstreamnt
atgtgtgacgagagcgcttgtgaactgctgcatgattggttctggaaggatgagaacgct
gtcccacctgtgtacatcctgcagcccatcacctcccacctcccccattatgatgacaaa
actctagggaatcaagaacagcagaagcacgacatgaaaagctggagagatacagagtac
cagctggcaaggctgctcagagcggctgcctccgaggcggaaaaggaagggttaataagc
aaagagcagaagcatgtttatttcaaatcagtgacagaatgggaaatcgaatgtggtctc
ttgtcaggtagagaagaagaggttaattgcgttgttttccttcgagaagtggaagatctt
caagagcacataaaggaggagacctcttcacaatttgttgacatcaaagcggatggtgaa
attgacatggaggcacaagaattactttccgagctgaagagcaaaatttccagcaacctt
tccaaacgcctcaaagttcacactgtccagtggagaagtgacattgccagaaggaaacag
aaaggatactccaagtacctgacaagcctttgtgaacagtttgttatggagataaaagag
cagattctcagtagagtcttaccctgtaatgaaagtgacgatgaaatggcaggggttatc
caagaactctgtcaccacatggcactctgcgcaaagaagtgtactgtcttctgtggaagg
agggacttcctagtcagtatctgtgaaagcatcaagcagagcgatgcctccctccatgct
cccctggttgtctttggaccttcgggcactgggaagactgctttggtttgtaaactgtcc
caagaagtaaggacaattctcggggaaaacacggtggttgtcttgcggctgctggggaca
tcacccctgagctccgaaatccactctgttttgaaaagcgtctgtcttcaaatctgcttt
gcttgtggcctttcagcccctccggctcaggtgaccaatatttataatgatctggtttgt
ttttttcacaaccttctcgccaaagtctctgagaaaaatgagaagtctctggttctgatt
cttgattccttggaccagctttctcctgctgatggggcccacagactttactggttaccc
aaggaatgtcccccaaaggtccacatcattatttctactctcccctttgaatacggaatt
cttcacactctccagggagtcattgcaggctctcggtgttactatgaggtcaagtcctta
tctggggagcagggaggagagatgctggagatgctgatggcttctgtcaagcgcaaacta
acgccagctcaacgcagcctgattttggagagtttcgagcagtgtgggcagccacttctg
ctcaagttggcttttgaggaggccaggcggtgggcttcttacactccccttacagaacta
caggttgccatgacaacccagagtgccatccagcacctctatggacgtctggagaaacag
catggcaggaccctggtgtcgcatgctctgggatatattgtttcatcaaagaatgggctc
tcagaggctgagctgaaggatgtactctcactggacgatgaagttctgggtgatatttac
cagtattggcctccaccaagcagtgatgtcatccacctcccaccgctgctgtggacgcga
ctccgatatgatttgggggactatctggtggagaggcaggcagatggctttactgttctt
ggcctctatcacagacagtttattgaagctgtgcaggaatgctacctttcagaagaggac
aaagccaggcgacattctgtactagccgatttctttaaaggaacttggagtcaaggagtc
cgaaaacccatcactctgccgtcccttaatcgatccttaaatgctgaccgaaaggtagca
gctcaacctctgtggttctctgacaaagtggccaacgtgaggaagctgagtgagttacca
tatcacctgcttcacgccggccgcattgaggagctcaagaaggaaatacttgggcgtatg
gactggctggtgtgtagagctctaaactgtggaataaagagtgttattggtgatctcaat
ctgtgttctgagtgtattgactgctccgaggtgcagctggtcagagatacattcttgctt
ttaaagcccacagttgacttcattgagggtgaagtggatgaaaatatcttctactatgaa
gtgccagcacgtctggagtttttctcttcgtcttacccgaccctgattggaaagctctgt
tgtcaatgtcgagactggtgttcaatgtgccaaacccctgcactggtcccagcatgtgga
ttctttcagccccctggtggcccgctgcagactaccctcacggggtttaagaagggtgtc
accgtgctggagctgagtcctgatcgcagtctgcttgtggcgggatcacaggacggtaga
atgatggtttggagtctgaaggacattgaggtcattcacatactgacaggacactccggg
gaggtgcggtgtgtacaggtaatcaatgaagggactcgcgctgtctccggctcttcagac
cattcactgcgtctgtggaacctcctgactggaaaggaggtttactccatacaggaggat
cacgctggttacgaggtctttgcgctgcttcaggtggaaacaaaaaaagaaatgatctat
tctgtgtccggatcccaggttaacgtctggcatctagaaacagcggagcctctctttcac
atctctggtggaagtccagatgtaaggatgtgcatggcagttctgggacccggattacca
ttgatatctgtgtcagagggcgggctgctgagtctttgggacagcaccactggagaaaga
caaggaatccattgtctggatggcatgagtgacgcagcaccagcttgtatcgcagtgctg
aaaaaccaaggcaggattgcagttggaaacaccaatggaattgctttgatctctccagag
ggaaggtgcatgatggaaacactcagctctccagcaacatttctggttgtgtctgaagat
gagatgcttttagctgcagggtttgagaaatttatccggattttcaagactcaacccaac
ttgttgagcagatcctcctgtccggatctagaccatggagatgctgtggagactgctagt
ttcagctcagatcagagcatgcttatgacgggatcccaggatgagatcataagggtgtgg
agtttagtgaaaggtctgctcttggtctcgctggatggaatgggcgtgccggtcacagct
cttgtcttggctggaagcacgttggtatccgcctcaaggtcagcctactatctgaaagtc
tggaatcttgattataataagaaaaacaaatcggtgacaccttttcaggatcggactgga
ctcgctgccatttcacacgagggagagttggtgtactttcccaaaactggagacaaggag
aaaatccttgtatggaattctcttgaaggtaaaactgttgacacccttgatgcttccagg
gaggtcacttgcttagaagtggctgagatgaaaaagctgctgttttgtgggttgctgtca
gggaccgtgctggtattcccagtgaacttcaggcaggacacgatgtgcattccacctcgg
aaatcactcggaccaacctgctgcatcggaatcagtaagcaagaggagaaacttgctgta
gcctatgagaactcaatttgtgtttttgacattaatccagggaggcactattctgtgata
gatggacccatttatgaattctccacttggggcccatcagccatctcgagtgttgctgta
cttgctagctacagggtgctgtatgggatggaaaatggggagttgtgttctcatgaatgt
aagacttctaaagtagtttccctagatgcacatgacagcaaggttacctgcatagctatc
agtaacagcgagcgatacgccttaagcgggagccaggacacgattcagcggctctggaac
ttggatctctctcaatgggaccatgaaatggactacaagggtttctttttccagggcatc
ttgtgtgctgccttttcccacgacgatcgctatgtattcactggatctcaggaccgagct
ctcaaagtctgggatatttcaaacggttcactgctaatggtgcagtatgtgtatgcaact
attaacagaatagtagctacaccggagggtctcattgccaccactagacttggctacgtg
atccgagaaaaattccactgtcctgattacatcagcgctcagtataatccacttcagaac
attaaagccacatattcagtaaagtcgagaaaaggggctggggatgctcccatgagtcct
gctgtaccgcgcaataattctgaaactgcatctcccaggaaagactacaagaagcaaagt
ctcaaatcatcgcagatgtgtttacttgtgtaa

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