Latimeria chalumnae (coelacanth): 102350775
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Entry
102350775 CDS
T02913
Symbol
SOX5
Name
(RefSeq) SRY-box 5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102350775 (SOX5)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102350775 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102350775
NCBI-ProteinID:
XP_005992338
Ensembl:
ENSLACG00000012837
UniProt:
M3XHT0
LinkDB
All DBs
Position
Un
AA seq
757 aa
AA seq
DB search
MSSKRPASPYGEADGEVAMVTSRQKVEEEESDGIPVFHFPLHSAFSSTPRSEEMLSTSSR
MQDSSGLSSPTFQPNLVELDGNKAMSSFAPHNSSTSPVKTEENGRQGSESGTSTALGTPE
RRKGSLADVVDTLKQRKMEELIKSEPEDTPSIEKLLSKDWKDKLLAMGSGNFGEVKGTPE
SLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQ
QLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRALAAAAAQQGFLLPPGFNYKPGCSD
PYPLQLIPTSMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGAKLPGMPGANLSATVSPT
SAHTEKNRTSPLPKNKDDVAQPLNLSAKPKTYDSRSPTSPTSPHIPSLKMNSGTSSVRTS
MQGTLASPAKVNSIDILSSITSSGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVV
NSLGLNNCRTEKEKAALESLSQQLAVKQAEDGKFTHAMMDFNMSGDSDGSAGVSESRIYR
ETRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQP
YYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFSVGQ
QGQIPISTAGAMYPGAIAVAGMPSPQIPSEHSSMSSSPEPGMPVIQSTYNIKNEEPCIKE
EVQMEDINGEMYDEYDEEEDDVDYGSDSENQIAGQAN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcgaccagcttctccatatggggaagcagatggagaggtagccatggtg
acaagcagacagaaagtggaagaggaggaaagtgatgggattccagtttttcactttccc
ctgcattcggctttttccagcactccacgctctgaggagatgctaagcacctcctctcga
atgcaggacagtagtggcctcagcagtcccacgtttcaacccaacttagtggaactagat
ggcaataaagctatgtcttcatttgccccacacaactcatctacctcacctgtaaagaca
gaagagaatggtcgacagggcagtgagtcaggaactagtacggcactggggacccctgaa
aggcgcaaaggcagcctggcagatgtggtggacacactgaaacagaggaaaatggaagag
ctcatcaagagcgagcccgaggacactcccagtatcgagaagctgctatcaaaggactgg
aaagacaagcttctagcaatgggatcagggaactttggagaagttaaagggactccagaa
agtctagcagagaaggagaggcaactcatgggcatgattaaccagctgaccagtttgcgg
gagcagctgcttgcggctcatgatgagcagaagaaacttgctgcttctcagatcgagaaa
cagcggcagcaaatggagcttgccaagcagcaacaggaacaaattgcaagacaacagcag
cagcttcttcagcagcaacacaaaattaaccttcttcaacaacagatccaggttcagggt
cagttgcctcctttgatgataccagtattccctccagaccagcgggctttagcagcagct
gctgctcaacaaggttttcttttgcctcccgggtttaactacaaaccaggatgcagtgac
ccttacccccttcagctgattccaacttccatggcagctgctgccgcggcaaccccaggc
ctgggcccactccaattgcagcagctgtatgcagcccagctcgctgcaatgcaagtatct
ccaggagccaagttgcctggcatgccaggggccaacctaagcgctactgtctcacctact
agtgcccacacagagaaaaaccgaacaagtcctctacctaaaaacaaggatgatgtggca
caaccgttgaacctttctgccaaacccaagacatatgacagcaggtcccccacatctcct
acatctcctcatattccttcactgaaaatgaattcaggaacaagttctgtcagaacctct
atgcagggtacattagctagtcctgctaaggtgaattcaatagatatcctttcctctatc
acttcatcaggttatttaaatgaccatgatgctgttacaaaggcaattcaggaagcaagg
cagatgaaggagcagcttcggagagaacagcaggtccttgatgggaaggtagctgttgtg
aacagtcttggactaaataattgcagaacagaaaaggagaaggcagcactggaaagcctg
agccagcagcttgcagtaaaacaggcagaagatggaaagtttactcatgccatgatggat
tttaatatgagtggagactctgatggaagtgcaggtgtgtcagaatctagaatttaccgg
gaaacccgagggcgaggcagcaatgaacctcacatcaagcgtccaatgaatgccttcatg
gtgtgggccaaagatgaaaggaggaaaattcttcaggcatttcctgatatgcacaactcc
aacatcagcaagatattggggtctcgatggaaagctatgaccaacttagagaagcagccc
tactatgaagaacaagccaggctcagcaaacagcacctggaaaagtacccagactacaaa
tacaagcccaggcctaaacggacctgccttgtggatggcaaaaaacttaggattggagag
tataaagctatcatgcgaaacaggcgtcaggaaatgaggcagtactttagtgtggggcag
caaggccaaatccccatcagcacagctggagcaatgtatcctggagctattgccgtggca
gggatgccatcgcctcagatcccatctgagcactcaagcatgtccagcagcccagagcct
ggaatgcccgttatccagagcacttacaacatcaagaatgaggagccttgtatcaaggaa
gaagtacagatggaggacataaatggggaaatgtatgatgaatatgatgaagaagaagat
gatgtggactatggcagtgatagtgaaaaccagatcgcagggcaagctaactga
DBGET
integrated database retrieval system
