Latimeria chalumnae (coelacanth): 102350898
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Entry
102350898 CDS
T02913
Symbol
CHRNA5
Name
(RefSeq) cholinergic receptor nicotinic alpha 5 subunit
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102350898 (CHRNA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102350898 (CHRNA5)
Ion channels [BR:
lcm04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
102350898 (CHRNA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
102350898
NCBI-ProteinID:
XP_006001908
LinkDB
All DBs
Position
Un
AA seq
452 aa
AA seq
DB search
MTEISGEASTNHPSSLHYHAGSSELLTLAKIEDCLFKDLFKDYQKWIRPVDHLNDTVRVK
FGLAISQLVDVDEKNQLMTTNVWLRQEWVDVKLRWNPDDYAGITSIRVPSDSIWIPDIVL
YDNADGRFEGSITKTVVKYDGNIIWTQPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDG
SQVDITLEDYHVDKREFFDNGEWEIITATGNRGNKTDGCCWYPFITYSFIIRRLPLFYTL
FLIIPCIGLSLLTILVFYLPSNGGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGE
YLVFTMIFVTLSIVITVFAINIHHRSSSTHNPMAPWVRKIFLHKLPKILCMRSHVDRYFT
TKEEAKTIYGSEPSRNTLEAALDSIRYITRHVMKENDVREVVEDWKFVAQVLDRMFLWTF
LVVSILGSVLLFIPVIYKWANIIVPVYAGNNE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaatatctggggaagcaagcacgaatcatccctcttcacttcactatcatgca
ggttcatcagaactcttaactcttgccaaaatcgaggactgtttatttaaagacctattt
aaggactaccagaaatggattcgaccagttgatcatttgaatgacacagtcagagtcaag
tttggcctggcaatctctcagctggtggatgtggatgagaaaaatcaattgatgacaact
aatgtgtggctgaggcaggagtgggttgatgtaaaattaagatggaaccccgatgactat
gcaggcataacatctatccgagtcccatcagattccatttggattcctgatattgtcctg
tatgacaatgctgatggtcgttttgaaggatccattacaaagacagtagttaagtatgat
ggcaatatcatatggacccagccagcaaattacaaaagctcctgtactattgatgttaca
ttctttccctttgacctacaaaactgttcaatgaagtttggttcttggacttatgatggg
tcacaggtagacataactttggaagactaccatgtagataaaagagaattctttgataat
ggagaatgggaaataatcacagcaacaggaaacagaggcaacaagactgatgggtgttgc
tggtaccctttcattacttactcatttataatcagacgtctgcctttgttttacactttg
tttcttataattccttgtataggtctgtcattattaactattcttgtcttctatctcccc
tccaatggaggtgaaaagatatctttgtgtacatctgttcttgtgtcactcactgtcttt
ctccttgttattgaggagatcattccatcttcctctaaagttataccacttattggagag
tatcttgtattcactatgatttttgtcacattatccattgtgataactgtctttgctatc
aacatacatcatcgatcctcctctacccacaatcctatggctccctgggttcgtaagatt
tttctccacaaattgccaaagatcctttgcatgcgaagccatgtggacagatatttcaca
actaaagaggaagccaaaactatctatgggtcagaaccatctaggaacactttggaagca
gctcttgactctatccgttatatcactaggcatgtgatgaaggagaatgatgtccgtgag
gttgttgaagactggaagtttgtggctcaggttcttgaccggatgttcttgtggacattt
cttgtggtttcaatacttggctcagtcttacttttcatccctgtgatctataaatgggca
aacattattgtgccagtgtatgctggaaacaatgaatag
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