Latimeria chalumnae (coelacanth): 102350929
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Entry
102350929 CDS
T02913
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like
KO
K08525
retinoid X receptor beta
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03320
PPAR signaling pathway
lcm04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
102350929
03320 PPAR signaling pathway
102350929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102350929
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcm03310
]
102350929
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102350929
Nuclear receptors [BR:
lcm03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102350929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
102350929
NCBI-ProteinID:
XP_006010773
Ensembl:
ENSLACG00000006999
LinkDB
All DBs
Position
Un
AA seq
450 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPQHPRAVSHSPPPLHSSMIGPGMTSSVNSPISSLGSPFPVISS
SMGSPSIPGTPSIGYGPVSSPQVNSTVNLSGLHTVSSSDDVKPPLGLRGIPSHPSGPMVS
GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCIVDKRQRNRCQYC
RYQKCLAMGMKREAVQEERQRGKEKDGEVESTSGANEDMPVEKILEAELAVEQKTDLGVD
GSGTGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIAS
FSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRA
IILFNPDAKGLSNPVEVELLREKVYASLESYCKQKYPEQQGRFAKLLLRLPALRSIGLKC
LEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcagagactccagaagtccagacagttcttccgtgagttctccacagcac
ccccgagcagtcagccactcccctcccccgctccactcctccatgattggccctgggatg
acctcttctgtcaactcgcccatcagcagcctggggtctcccttccctgtcatcagctct
tccatggggtcccccagcatccctgggaccccctccatcggctacggccccgtcagcagc
ccacaggtcaactcgacagtaaacctgtcaggtctgcacacggtcagcagctcggacgac
gtgaagccccccctcgggctgcggggcattccctcccacccctcgggacccatggtgtct
ggaaagcggctgtgcgcgatctgtggtgacagatcttcaggtaaacattacggtgtgtac
agctgcgagggttgcaagggcttcttcaagcggaccatccgcaaggacctgacctacacc
tgccgggacaacaaagactgcatcgtggacaagcgccagcgcaaccgctgccaatactgc
cgctaccagaagtgtctggccatgggcatgaaaagggaagctgtccaggaggagaggcag
aggggcaaggagaaggatggagaggtggagtccaccagcggtgccaatgaggacatgccc
gtcgagaagatcctggaggctgagctggcagtcgagcagaagacggacctgggtgtggac
ggctctggaacaggcggtagctcccccaacgaccccgtgaccaacatctgccaggcggct
gacaagcagctcttcaccctggtggagtgggccaagcgtatcccgcacttctctgagctc
ccattggacgatcaggtcatcctcctccgagcaggctggaatgagcttctcattgcctct
ttttcacaccgctctatcacggtgaaagatggaatcctattggctacggggctgcacgtg
cacagaaacagcgcacacagcgccggcgtgggagccatcttcgacagggtactgacggag
ttggtctcgaagatgcgtgacatgcagatggacaagacagagctcggctgcctgagggcc
atcatcctcttcaacccagatgcgaagggcttgtcaaacccggtggaggtggagttgctg
cgggagaaggtctatgcctctctggaatcgtactgcaaacagaaataccccgaacagcag
ggcaggtttgcaaagctcctgctccgtctccctgcgctgcgttcgattggtctaaaatgc
ctggagcaccttttcttctttaagctgatcggcgacacccccatcgacacgttcctcatg
gagatgctggaagccccccaccagatgacataa
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