Latimeria chalumnae (coelacanth): 102350973
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Entry
102350973 CDS
T02913
Symbol
RBBP6
Name
(RefSeq) RB binding protein 6, ubiquitin ligase
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcm04121
]
102350973 (RBBP6)
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102350973 (RBBP6)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
U-box type E3
102350973 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
102350973
NCBI-ProteinID:
XP_014345417
Ensembl:
ENSLACG00000012333
LinkDB
All DBs
Position
Un
AA seq
1778 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIIRRIPIGGVKTASKTFIGRTEPVSGTSKAIEDSSASISLAQLTKTANLA
EANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDKN
FEAVPRIKKSTGIPRSFMREVDDPNMKGAMLTNTGKYAIPTIDAEAYALGKKEKPPFLPE
EPSSSSEDEDPIPDELLCLICKDIMNDAVVIPCCGNSYCDECIRTALLESEEHTCPTCHQ
TDVSPDALIANKFLRQAVNNFKNETGYTKRLRKPTQPHQSQQARQPPQRILQPVGRPTLS
RQQDPLMVAAPAPLVTTVNTPTPVPAVPPVTSTVQMNQPSAVVQSTDIPIAPASQETGKY
KGGDLNEPSAKVAVTVVTLAAAAPPPPVAAATTAGITTAHPPLLATIATEQKGYQVPVLG
HPTSQGHTIPITGPPMRSSTIRTGSSRPGWEATSTRTRQQPNDRTPRTQTATTLPVPTPV
YVPPPTLYPPPPHSLPVPPGVPPPQFPPQFPPGQPPATGYTVPPPGFPPAPTSITSWVPA
GTQATQTSAVTSLAQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYRKIQK
ERRRSFSSIKHLFCRSKSPFSGSSYSGSSYSYSKSRSRSSRSRSYSRSFSRSRSRSYSRS
PTYSRRGRGKSRSYRSRSRSHGYRHSRSRSPPYRKYRSRSKSPAYRGHSPTKRNAPQGDG
EREHINRYRDIPTYDMKAYGCGRSVDLRDPYERERYREWERNYREWYEYYRGYTNATQPK
PRTPTNRENYTPERYGPTVSRRENSSYIRGRREDYSGGQSHRGRTIGGNYPDKFSARDSR
GVKDPRRSKEKEAEIASGEGKGNKHKKHRKKKKGDENEGPPTADSADVGKKPREPVGNDG
KGDSLFTAPNRDDATPVRDEPMENDSVSYKPVSDKDRKDKPKAKGEKVKRKAEGSDSKKE
SGMKSIKVSQEKFEVDREKSPRSEPPAKKLKEDVHQKVETSKPYLSQKEEKGLHTRKVYL
KVVKEQTDAKGVKEEKVKKEHVKEVKQEKVLNKEDKPKKSNEKVSKTTEVKSEKRKRKAE
EKGVEKDLETPSVKALKAESAEELKQSKTKAESDLEKNTEAPLEKAGEDRSIPVTAPVKK
IKLNRETGKKIASGEGVSAGDEPADKPETNNGKVKQEKVKKMRRKIIAEGSSSTLVDYTS
TSSTGGSPVRKTEEKHDIKRTVIKTMEEYNNDNTAPAEDVIIMVQVPQSKWDKDEFDSEE
DDKASSAPSSVVAKPPTVVKNLAVKASNSVKQNEIETVPSEKMQKSAKDSSYEGAQLESK
ATKSSVPSEKGKPKEREHLGPDKDALEKKKGLVQQEKDKNAERAIDAKNTQPPSKDRPCD
KHDAGSRGSSLKDFGMSNDRKAEHESGKDNYSSKRKDEISRRRESPHRNKEPVLGQRSRE
REAYEEISKRTDSKRSSYSPTRERKPYTDHKVLSDAKHNAGEYKSDKTSSKEKEKYVAPE
IRNKDRDLTGHRSSSRTQSPDTKNERDRSAGQSEREYGKSKPLLSRSSRLSSDLTRETDE
AAFVPDYNESDSESNLSVKNDEHTGKSLKDSRDKGDRVKESKGLLLSPQQSLNRSHSQSS
QSVSHSRSQSPLESQPRSRSSSATSAESQDSKKKKKKKDKKKHKKHKKHKKHKKHTGNES
ESEKGQKHKHKKKKSKKNKEKEKEKNKDDQKLKSSVSV
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtacattataaattttcgtctaaactaaactatgatacggtcacgtttgat
ggcctccatatttctctttgtgacttgaagaagcaaatcatggggagggaaaaactgaaa
gcagcagactgcgatcttcagatcaccaacgcacagactaaagaagaatacacggatgat
aatgcactgattcccaaaaattcctctgtgataataaggagaatccctattggaggtgtt
aagactgcaagcaaaacatttataggccgaactgaaccagtgagtggaacatccaaagca
attgaggactcttctgcatctatttctctggcccagctaacaaagactgccaatctggct
gaagcaaatgcatcagaagaagataaaataaaagcaatgatgtcacaatctggccatgaa
tatgatcctataaattacatgaaaaaaccattgggtccaccaccaccatcatacacgtgt
tttcgttgtgggaaacctgggcattacatcaaaaactgcccaactaatggggacaagaac
tttgaagcagtcccacggataaagaaaagcactggaatccctaggagtttcatgagggaa
gtagatgatcctaatatgaagggagcaatgcttacaaatacaggaaaatacgccatccct
actattgatgcagaggcatatgcactaggaaagaaagaaaagccaccttttctgccagaa
gagccatcatcatcttctgaagacgaagatccaattcctgacgagctgctttgtctgatc
tgcaaggatattatgaatgatgcagttgtcataccgtgctgcggcaacagttattgtgat
gaatgtattagaacagcgctgctagaatcagaagagcacacttgtccaacgtgtcatcag
acagatgtttctcctgatgctttaattgccaacaagtttttacgtcaggccgtgaacaat
ttcaaaaatgaaactgggtacaccaaaaggcttcgtaaaccaactcagcctcatcaaagt
caacaggcaagacagccccctcagcgtattctgcaaccagtgggaagaccaactctgtcc
agacagcaagatcctctgatggttgctgctcctgctcctcttgtaactactgttaataca
ccgacaccagttcctgctgttccacctgtgacaagtactgtacagatgaatcagccaagt
gctgttgtccaatctactgatataccaatagcgcctgcttctcaagaaacaggaaaatat
aagggaggagatttgaacgagcccagtgctaaagtcgcagttactgttgttacccttgct
gctgctgctcctcctcctcctgttgctgctgctactactgctggaattaccactgcccat
ccgcccttacttgccaccattgctacagagcaaaaggggtaccaggttcctgttctggga
cacccaacttcacaagggcacactatacctataactggccctcctatgaggtccagtact
attcgaactgggagcagtagaccagggtgggaagctacatctaccagaactcgtcaacaa
cccaatgatcgtacaccaagaacccaaactgcaacaacactgccggttccaacacctgtc
tacgtacctccacctacactgtatcccccacctccccacagcttacctgtccctccgggt
gtgccaccacctcagtttcctccccagtttcctcccgggcaacctccagcaactggatac
actgtcccacctcctgggttccccccagctccaaccagtattacatcctgggtaccagca
gggacacaggctacccaaacaagtgctgttacatcattagcccaagcaccacctctctca
agagaagagttttacagagaacaacggcgattaaaagaagaggagaagaaaaaatcaaaa
ctggatgaatttacaaatgattttgcaaaggaattaatggaatatagaaaaatccaaaaa
gaacgcagacggtccttttcaagcattaaacatttattttgcagatctaaatcaccattc
agtggatcatcttactctggaagttcatattcttactctaaatcaagatctcgatcctct
cgttcacgttcctactctcgttcattcagtcggtctcggtctcgatcctactcaaggtca
cctacatattccagaagaggcagaggaaaaagcaggagttaccgttctagatcaagatct
catggctaccgccattcaagatcaaggtctccaccctacagaaaatatcgttctcgctca
aaatctcctgcttatagaggacattctccaaccaaaaggaatgcaccacaaggcgatggg
gagagagaacatattaatcgctaccgggatataccaacttatgacatgaaagcatatggc
tgtggccgctctgttgatctcagagacccatatgagagggagaggtacagagaatgggaa
aggaactatagagagtggtatgaatattacagaggctacactaatgccacccagccaaaa
ccaaggactccaacaaatagagagaactatactccagagcgatatggtcccacagtatct
agacgagagaattcttcttatattagaggtcgtagggaagattactcaggtggacaaagc
cataggggtcgtactataggtggaaactatcctgataaattttctgctagagatagtcgt
ggtgtgaaggatcctaggagatcaaaagaaaaggaggctgaaattgcttctggagaagga
aaaggaaacaaacataaaaagcacagaaagaagaaaaaaggggatgaaaatgaaggccct
ccaaccgcagattctgcagatgtgggtaaaaaaccaagagagcctgttgggaacgacggc
aaaggagactccttgtttacagccccgaacagagatgatgctacacctgtaagagatgaa
cccatggagaatgattctgtctcatacaaaccagtatcggataaggacaggaaagacaag
ccaaaagcaaaaggtgaaaaagtaaagcgtaaagcagaaggcagtgattctaagaaagaa
agtggaatgaaatcaatcaaagtatctcaggaaaaatttgaagtggatcgtgaaaaatcg
cctcgctctgaacccccagctaaaaaacttaaagaggatgtgcatcagaaggtggaaact
tcaaaaccgtacctttcacagaaagaagaaaaaggtttgcacactcgaaaagtatacctt
aaagttgtaaaagagcagactgatgcaaagggggtaaaagaagaaaaggttaagaaagaa
catgttaaagaagttaaacaagaaaaggtactgaataaggaagataagcctaaaaagtct
aatgaaaaggtaagcaaaactacagaggttaaatcagagaaaagaaaacgaaaagcagaa
gagaaaggagtggaaaaagatcttgaaactccttcagtaaaagcacttaaagctgaaagt
gcagaagagctaaaacagtcaaaaacaaaagctgaatctgatttggagaagaatactgaa
gcaccacttgaaaaagcaggggaggacagaagcattcctgttactgcaccagtgaagaaa
atcaagcttaaccgagagactggcaaaaagattgcaagtggggaaggcgtgtctgctgga
gatgagcctgctgataaacctgagacaaataatggaaaagtaaagcaagaaaaagtgaaa
aagatgaggaggaaaataattgctgaaggatcaagctcaacccttgtggattataccagc
actagctcaacaggaggcagcccagtgagaaagactgaagaaaagcatgacatcaaaaga
acagtcattaaaaccatggaggaatataacaacgacaacacagctccagctgaagatgtg
attattatggttcaggttcctcagtccaagtgggataaagatgaatttgattctgaagag
gatgataaggcctcaagtgcaccttcttcagttgtagcaaaaccacccactgttgtaaag
aacctcgctgttaaagcgtcaaactctgtaaaacaaaatgagattgaaactgtaccatca
gaaaaaatgcagaaatctgcaaaggattcaagttatgaaggagctcagcttgaaagcaag
gctacaaagagttcagttccaagtgaaaaaggcaaacccaaagagagggaacatttaggt
cctgacaaggatgcattagaaaagaagaaggggttggttcaacaagaaaaagacaaaaat
gcagaacgagccattgatgcaaaaaatactcagccaccttccaaagacagaccttgtgat
aaacatgatgcaggcagtcgggggtcctcacttaaagactttggaatgagcaatgacaga
aaagctgaacatgagagtggcaaagataattatagttcaaaacggaaagacgagatcagt
agacgacgagaatctcctcatcggaataaagaacctgtcctgggtcagagaagtagagag
agagaagcctacgaagaaatttcaaaaagaactgattcaaaaagaagcagctacagcccc
acgagggaaagaaagccgtatacagatcataaagtcctttcagacgcaaaacacaatgca
ggtgaatacaaatctgataagacatccagtaaagaaaaggagaaatatgtggcaccagaa
attagaaacaaagacagggatcttacgggacataggtcatcttccagaactcaatcgcca
gatacaaaaaatgagagagaccgttctgctggccaaagtgaaagggagtatggtaaaagt
aagccattgctgagtcgatcttcccgcctttcttctgacctaaccagagaaaccgatgag
gccgcctttgtaccggactacaatgagagtgacagtgaaagtaatttgtcagttaaaaat
gatgaacatacaggaaaaagcttgaaagattcaagggacaagggtgaccgtgtcaaggaa
agcaagggcttgttactcagcccccagcaaagcttgaacagaagtcacagccagagcagc
caaagcgtcagccacagccgtagtcaaagtccattagagagccagcctcgcagtcgtagc
agcagtgctacctccgcagagagtcaggacagcaagaagaagaagaagaagaaggacaaa
aagaagcataaaaaacacaagaaacacaagaagcataagaagcatactggaaatgagtct
gaatctgaaaaaggacagaaacacaagcataagaaaaagaaatccaagaaaaataaagag
aaggaaaaagagaaaaataaagatgaccaaaaactgaaatcatctgtcagtgtatga
DBGET
integrated database retrieval system
