KEGG   Latimeria chalumnae (coelacanth): 102350988
Entry
102350988         CDS       T02913                                 
Symbol
GABRP
Name
(RefSeq) gamma-aminobutyric acid type A receptor pi subunit
  KO
K05181  gamma-aminobutyric acid receptor subunit beta
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    102350988 (GABRP)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcm04040]
    102350988 (GABRP)
Ion channels [BR:lcm04040]
 Ligand-gated channels
  GABA-A
   102350988 (GABRP)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb zf-CCHC DUF1451 zf-C2H2_10
Other DBs
NCBI-GeneID: 102350988
NCBI-ProteinID: XP_006002506
LinkDB
Position
Un
AA seq 974 aa
MSDAGPRSEGQGKKEEVVISENVQDLSKDKEEADESVEGMDTGLESASNTHPQVIRSEGA
TGTENKVLYSEILGQGENRNWENSAYLDPRRRNVVRLHYTGSIVPDRESVGRDLLIDSLH
LSPIHVYAFIHFNGSRDYDISFWNPAFLDLFWERFEQVKDAPIWQNFEIIKVSQNTVRQV
TILFRTELVSPPDIRFWLRRYCSILGALNPIQDSNGFWNGGYKVKVQLKSKDNKIEHLPN
TIVIGRDRGYLFYPGQPRTCRRCGSTKHFSTNCAVQVCNKCGKQGHITKDCPNIIVCNLC
NIQGHTYAKCPMATKNLSLPFQVVLDPIPDPVVNAFPNVIPSLGEEPVVKQSTGASELPK
PAFEQQEVTNKIPDPTLERDAEGFLIPAPVLHEPSTSGTAKCGIEAASSLTSSLEEISSV
GEDAAASESNVTTPGDAMASDEAMVSSDVNEAENGSSAEDALLPVGEGKGKGRRYRGRSE
VADWAQETELSTVGSDRVLRSKKSLQEECTWDTVRRKKKKKRPDRAGKMDTGGGTSPVVC
SMAAAGVCGITRCFLSGASNSDRNDAVLLPTIQMLMKGYNKYLRPNFDGEPVKVGMSLDI
ASIDAVSEINMDYTATIFLRQRWIDERLLFEGNKSLSLDGRLVELLWVPDTFIVDSKKSF
LHDITVENRLIRIFANGTVLYAIRITATIACNMDLTKYPMDRQVCTLQLESWGYNIQDVM
FYWTRGNDSVRGLETLQLAQYTVENHYTSISQAVYETGFYPKLVLHFELRRNILYFILET
YVPSTLLVILSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVY
LGICFSFIFGALLEYAIAHFCTVHHYTIEDVHRDLKKELEESNGCITAISRNSTPIIKRG
KHLPRTNSSSENNGRNDLALDNSKILVLFKNKAHRIAGCFTVENPDNIDRYSRLVFPLAF
VVINFFYWIYYLFL
NT seq 2925 nt   +upstreamnt  +downstreamnt
atgtcggatgccggtcctcgaagcgagggacagggcaagaaggaagaggttgtgatttcg
gagaacgtgcaagatttgtctaaagataaggaagaggctgatgaaagtgtggaagggatg
gatacaggcttggaaagtgcatcaaatactcacccacaagtgattagaagtgaaggagct
acaggtacggaaaataaagtactttattctgaaatattgggacaaggtgagaataggaac
tgggagaattccgcctacctcgaccccagaaggcggaatgttgtcagactacattatact
ggcagtattgttccagaccgtgagtcggtaggacgggacctgttaattgactcgttgcac
ttatcacctatacatgtttatgcttttatacattttaacgggtccagggattacgatatt
agtttttggaacccggcttttttggatttattttgggaacgattcgaacaggttaaagac
gctccaatttggcagaattttgaaataattaaggtttcacaaaacacggtgagacaagta
acgatccttttcagaaccgagttagtgtcgcctccggacattcgtttctggttaagaagg
tactgctcgattctaggagctttaaatccgattcaagatagtaacggtttctggaacggc
ggctacaaggtgaaggtacaattaaagagcaaggacaataaaattgaacacctaccaaac
accatcgtgattgggagggaccgtggttacttattttatccaggccagcctaggacctgc
cgcaggtgtggatccacaaagcactttagcacaaattgcgctgtacaggtctgtaacaag
tgtggtaaacagggacatattactaaagactgtccgaacattatcgtttgcaatttatgc
aatatacaggggcatacttatgcaaagtgcccaatggctactaaaaacctttctcttccc
ttccaagtagtattagaccctatcccagacccagtagttaatgcctttcccaatgtgatc
cccagtttaggagaagagcctgtggttaaacaaagtactggagcgagtgaattacctaag
cctgcctttgaacagcaagaagtcaccaataaaatacctgatcctacgctggagagagat
gctgaaggatttcttatcccagctccggttttgcatgagccgtctacgtctggtaccgct
aaatgcggtatcgaagctgcttcttccctcacttcatcgttggaggagatttcgtcggtt
ggggaggacgccgccgcttcggagtccaacgtgacgacgccaggtgatgcgatggcgtcg
gatgaggcgatggtgtcaagtgacgtgaacgaggccgaaaacggaagttcggctgaagat
gcccttcttccagtaggagaagggaaagggaagggcaggcgttacagggggcgatctgag
gtggctgactgggctcaggaaacggagctgtctacagtggggtcagacagagtcctgaga
tccaagaagtctcttcaagaggagtgtacatgggacacagtgaggagaaagaagaaaaag
aagaggccagatagagctgggaaaatggatacaggagggggaacctcaccagtggtttgc
agtatggcagcagctggggtctgtggcatcacaaggtgtttcttaagtggtgcttccaac
tcagacagaaatgatgcagtgttgcttccaacaattcagatgctcatgaaaggttataac
aagtacctacgacccaattttgatggagaacctgttaaagtaggaatgagtcttgatatt
gctagtattgatgctgtatcagaaattaacatggactacacagctacaattttcctgcgc
cagcgttggattgatgagcgtctcctttttgagggtaacaagagcctcagtttagatgga
agacttgtggaacttctctgggttccagacactttcattgtggactctaaaaaatcattt
ctacatgatatcacagtggagaatcgactcatacggatttttgccaacggtacagtcttg
tatgctataagaattactgcaactattgcatgtaacatggacctgacaaaatatccaatg
gacagacaagtctgcacactgcagctggagagttggggttataacatacaggatgtaatg
ttttattggacaagaggaaatgattcagtacgaggtctggaaactttgcaacttgcacaa
tatacggttgaaaatcactatacctcaatttcccaagctgtgtatgaaacaggtttttac
cccaaactggtcttgcactttgaacttcggagaaatattctttattttattttggaaaca
tacgttccttctactttactggtcatattatcctgggtttcattttggatcagtcagtct
tctgttcctgcaagaacctgtattggagtaacaacagtattaaccatgacaactctaatg
atgggggccagaacatccttaccaaatgccaattgttttataaaagctattgacgtctat
ctgggcatctgcttcagttttatctttggtgcattattagaatatgccattgctcatttc
tgcacagtacaccactatacaattgaggatgtccacagggatcttaaaaaagaacttgaa
gaatcaaatggatgcattactgccatttccagaaattccacacccattatcaaaagaggc
aaacatttaccaaggactaattcttcttctgaaaacaatggacgtaatgacctggctctg
gataacagcaaaatattagttttgtttaaaaataaagcacatagaattgctggttgtttc
actgtggaaaatcctgataatattgatcgttactcaaggctggtcttccctctagctttt
gttgtaatcaattttttttactggatttactatctgtttctatag

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