Latimeria chalumnae (coelacanth): 102350988
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Entry
102350988 CDS
T02913
Symbol
GABRP
Name
(RefSeq) gamma-aminobutyric acid type A receptor pi subunit
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04080
Neuroactive ligand-receptor interaction
lcm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102350988 (GABRP)
04082 Neuroactive ligand signaling
102350988 (GABRP)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102350988 (GABRP)
Ion channels [BR:
lcm04040
]
Ligand-gated channels
GABA-A
102350988 (GABRP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
RBD_ZCCHC3_2nd
RBD_ZCCHC3_1st
zf-CCHC
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
102350988
NCBI-ProteinID:
XP_006002506
LinkDB
All DBs
Position
Un
AA seq
974 aa
AA seq
DB search
MSDAGPRSEGQGKKEEVVISENVQDLSKDKEEADESVEGMDTGLESASNTHPQVIRSEGA
TGTENKVLYSEILGQGENRNWENSAYLDPRRRNVVRLHYTGSIVPDRESVGRDLLIDSLH
LSPIHVYAFIHFNGSRDYDISFWNPAFLDLFWERFEQVKDAPIWQNFEIIKVSQNTVRQV
TILFRTELVSPPDIRFWLRRYCSILGALNPIQDSNGFWNGGYKVKVQLKSKDNKIEHLPN
TIVIGRDRGYLFYPGQPRTCRRCGSTKHFSTNCAVQVCNKCGKQGHITKDCPNIIVCNLC
NIQGHTYAKCPMATKNLSLPFQVVLDPIPDPVVNAFPNVIPSLGEEPVVKQSTGASELPK
PAFEQQEVTNKIPDPTLERDAEGFLIPAPVLHEPSTSGTAKCGIEAASSLTSSLEEISSV
GEDAAASESNVTTPGDAMASDEAMVSSDVNEAENGSSAEDALLPVGEGKGKGRRYRGRSE
VADWAQETELSTVGSDRVLRSKKSLQEECTWDTVRRKKKKKRPDRAGKMDTGGGTSPVVC
SMAAAGVCGITRCFLSGASNSDRNDAVLLPTIQMLMKGYNKYLRPNFDGEPVKVGMSLDI
ASIDAVSEINMDYTATIFLRQRWIDERLLFEGNKSLSLDGRLVELLWVPDTFIVDSKKSF
LHDITVENRLIRIFANGTVLYAIRITATIACNMDLTKYPMDRQVCTLQLESWGYNIQDVM
FYWTRGNDSVRGLETLQLAQYTVENHYTSISQAVYETGFYPKLVLHFELRRNILYFILET
YVPSTLLVILSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVY
LGICFSFIFGALLEYAIAHFCTVHHYTIEDVHRDLKKELEESNGCITAISRNSTPIIKRG
KHLPRTNSSSENNGRNDLALDNSKILVLFKNKAHRIAGCFTVENPDNIDRYSRLVFPLAF
VVINFFYWIYYLFL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgccggtcctcgaagcgagggacagggcaagaaggaagaggttgtgatttcg
gagaacgtgcaagatttgtctaaagataaggaagaggctgatgaaagtgtggaagggatg
gatacaggcttggaaagtgcatcaaatactcacccacaagtgattagaagtgaaggagct
acaggtacggaaaataaagtactttattctgaaatattgggacaaggtgagaataggaac
tgggagaattccgcctacctcgaccccagaaggcggaatgttgtcagactacattatact
ggcagtattgttccagaccgtgagtcggtaggacgggacctgttaattgactcgttgcac
ttatcacctatacatgtttatgcttttatacattttaacgggtccagggattacgatatt
agtttttggaacccggcttttttggatttattttgggaacgattcgaacaggttaaagac
gctccaatttggcagaattttgaaataattaaggtttcacaaaacacggtgagacaagta
acgatccttttcagaaccgagttagtgtcgcctccggacattcgtttctggttaagaagg
tactgctcgattctaggagctttaaatccgattcaagatagtaacggtttctggaacggc
ggctacaaggtgaaggtacaattaaagagcaaggacaataaaattgaacacctaccaaac
accatcgtgattgggagggaccgtggttacttattttatccaggccagcctaggacctgc
cgcaggtgtggatccacaaagcactttagcacaaattgcgctgtacaggtctgtaacaag
tgtggtaaacagggacatattactaaagactgtccgaacattatcgtttgcaatttatgc
aatatacaggggcatacttatgcaaagtgcccaatggctactaaaaacctttctcttccc
ttccaagtagtattagaccctatcccagacccagtagttaatgcctttcccaatgtgatc
cccagtttaggagaagagcctgtggttaaacaaagtactggagcgagtgaattacctaag
cctgcctttgaacagcaagaagtcaccaataaaatacctgatcctacgctggagagagat
gctgaaggatttcttatcccagctccggttttgcatgagccgtctacgtctggtaccgct
aaatgcggtatcgaagctgcttcttccctcacttcatcgttggaggagatttcgtcggtt
ggggaggacgccgccgcttcggagtccaacgtgacgacgccaggtgatgcgatggcgtcg
gatgaggcgatggtgtcaagtgacgtgaacgaggccgaaaacggaagttcggctgaagat
gcccttcttccagtaggagaagggaaagggaagggcaggcgttacagggggcgatctgag
gtggctgactgggctcaggaaacggagctgtctacagtggggtcagacagagtcctgaga
tccaagaagtctcttcaagaggagtgtacatgggacacagtgaggagaaagaagaaaaag
aagaggccagatagagctgggaaaatggatacaggagggggaacctcaccagtggtttgc
agtatggcagcagctggggtctgtggcatcacaaggtgtttcttaagtggtgcttccaac
tcagacagaaatgatgcagtgttgcttccaacaattcagatgctcatgaaaggttataac
aagtacctacgacccaattttgatggagaacctgttaaagtaggaatgagtcttgatatt
gctagtattgatgctgtatcagaaattaacatggactacacagctacaattttcctgcgc
cagcgttggattgatgagcgtctcctttttgagggtaacaagagcctcagtttagatgga
agacttgtggaacttctctgggttccagacactttcattgtggactctaaaaaatcattt
ctacatgatatcacagtggagaatcgactcatacggatttttgccaacggtacagtcttg
tatgctataagaattactgcaactattgcatgtaacatggacctgacaaaatatccaatg
gacagacaagtctgcacactgcagctggagagttggggttataacatacaggatgtaatg
ttttattggacaagaggaaatgattcagtacgaggtctggaaactttgcaacttgcacaa
tatacggttgaaaatcactatacctcaatttcccaagctgtgtatgaaacaggtttttac
cccaaactggtcttgcactttgaacttcggagaaatattctttattttattttggaaaca
tacgttccttctactttactggtcatattatcctgggtttcattttggatcagtcagtct
tctgttcctgcaagaacctgtattggagtaacaacagtattaaccatgacaactctaatg
atgggggccagaacatccttaccaaatgccaattgttttataaaagctattgacgtctat
ctgggcatctgcttcagttttatctttggtgcattattagaatatgccattgctcatttc
tgcacagtacaccactatacaattgaggatgtccacagggatcttaaaaaagaacttgaa
gaatcaaatggatgcattactgccatttccagaaattccacacccattatcaaaagaggc
aaacatttaccaaggactaattcttcttctgaaaacaatggacgtaatgacctggctctg
gataacagcaaaatattagttttgtttaaaaataaagcacatagaattgctggttgtttc
actgtggaaaatcctgataatattgatcgttactcaaggctggtcttccctctagctttt
gttgtaatcaattttttttactggatttactatctgtttctatag
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