Latimeria chalumnae (coelacanth): 102350991 Help Entry 102350991         CDS       T02913                                  Symbol USH2A Name (RefSeq) usherin   KO K19636   usherin Organism lcm  Latimeria chalumnae (coelacanth) Brite KEGG Orthology (KO) [BR:lcm00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:lcm03037]     102350991 (USH2A) Cilium and associated proteins [BR:lcm03037]  Primary cilia and associated proteins   USH complex and associated proteins    102350991 (USH2A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  EGF_laminin fn3 Laminin_N Pur_ac_phosph_N Laminin_G_3 Ig_DSCAM-DSCAML_C EGF_LMN_ATRN ChitinaseA_N Motif Other DBs NCBI-GeneID:  102350991 NCBI-ProteinID:  XP_006004117 Ensembl:  ENSLACG00000011245 LinkDB All DBs Position Un AA seq 1488 aa AA seqDB search MAIIIYLGLLHQEQPLLLRMNCLALHRRVGLLFYKVETLLLACYIFTSLVSSQGHFPRLE SIAAFKNVTTVPSQATCGQPARNTFCLSTANVESIRSCTQQFCIQECPYRSSSPSFTNLF SAGLGTCVTKDKNDLHPSSSNISTSFIFWNQVDCFTTPPSQNLRFSGSFTLAVWLKPEQE GVMTIIEKTTNGQIIFKLTISERETGLHYRSANGLQPPLKIMTLGRIPLKKWIHLALQVH NNRVSFFINGLEEDNTAFDAFLLIGPILDALPNAVVRIGQSMNDSEQFVGRMQDYRFYQT ALTNREILEVFSGNLPHLHSQTKCRCPGSHPRVHPLVQRYCIPNGADDTTNDRVLRLSHD AHPLDYINDNDIGTSWISSVFTTLTELDKGMTITVDLQNGQYQVFYVILQFLSPQPEAVK IQRKKRRDSEWEDWQYFARNCSIFGMVNNGLLEKPDSVNCLQLPDNVPYSRGNVTFSILT PEPNPRIGYNDFYNTPSLQEFVKATHIRIHLQGQYYTSRPSVDFRHRYYGVDEITVSGRC NCHGHADQCDTSLDPYQCFCHEESHTEGNKCDRCMSLFNEKPFHQGDQVHSYNCKPCQCY NHATSCHYNNSLDPFPEDHFRGGGGVCDNCQHNTTGRNCELCKNFFYRELGANISAADVC KPCDCYEPGTINGSLLCDRIGGQCSCKRHVSGRQCNQCRDGFYNLRQSDPDGCSPCNCNT SGTVDGDITCHQNSGQCKCKPNVIGPRCDRCNFGFKLLHSSSLGGCEPCQCNINGSTNQF CNPFTGQCNCKEQVKGLQCDTCVDNLYGLKRDGCNSCNCNLAGTVPKTVCDAKTGQCVCK PNVGGQRCDVCVDGYHSLQQRNSLGCLPCNCNKAGTVDGSLVCEKSTGQCPCKANVTGLW CNQCVPQTYNLTFSNLQGCQACDCDPTGTVEGTVCNQSSGQCICLPNRQGRRCDQCRPGF YLPPLNTFGCLPCDCHMTGSVHQICNDVIGQCICQDISVTGHRCDQCKQLYFGFNPGTGS CQLCHCDPTGTFNGTCHSITGQCFCKLFVTGLKCDNCIPNASHFDANNPLGCTKTPSQQP PPLGQVLSSAIISLSWSPPDSPNSHLLTYGLYRDGKKIKLTQDQLPFGIQNYNDTSLSPY TMYSYYIEASNVHGSTRSTTVSYRTKAGIPTGNLHLEYSSPVGPRSVSFNWTTLSNLSGP IERYILASTSLTDSEPHDHYEGLQTSVTVTDLVPFTKYNFSVQACTSGGCAESLPLTVVT AQAPPDGQNPPTVQNFSSTDLYVEWSPPLEPNGIIIRYELYMRGPLKSGDSNPPLEKRVF HHSGWFNPRPVIESANENALTPPQTNTTVTDLEPYSTYEFRVYAVNMAGSTYSEWAAGKT AEGAPVFMPPPSVFPLSSSSLNVSWKKPNDNETRGEVIGYNINIIEEQSTNKFAPPVLSQ VLYRASAHVQSYTVTGLRPYGSYNFTITLCNLIDCVTSEPGTGRTLAA NT seq 4465 nt NT seq  +upstreamnt  +downstreamnt atggccatcattatttatttaggattactccatcaagagcaacccttgcttttaagaatg aattgtcttgcacttcacaggagagttgggctattattttataaagttgaaacattgctt ttagcttgttacatcttcacatcattggtcagctcacaaggacattttccaagacttgaa agtatagcagcttttaagaatgtaactacagtgccatcccaagcaacctgtggtcaacca gcgaggaacactttttgcctgagtactgctaatgtggaaagcattcggtcttgcacccaa caattttgtatccaggagtgcccttacaggtcttcaagcccttcatttacaaaccttttc tcagcaggcttgggaacctgtgtcaccaaagacaagaatgacttacacccaagttcctca aatatctccacaagttttattttttggaatcaggtggattgctttacaactcccccttct cagaatctgagattttcaggttctttcactttagcagtatggctgaaacctgagcaagaa ggagtaatgacaatcattgaaaaaactaccaatggacagattatatttaagcttacaatc tcagagagggaaactgggcttcactaccgttcagcaaatggcttgcaacctccattgaaa attatgactctaggaaggattcctttgaagaaatggattcatctggcattgcaggtgcac aacaacagagtcagtttcttcataaatggcttagaggaagacaacactgcttttgatgca tttcttcttattggtccaattttagatgctctacctaatgctgtagtgcgaattgggcag agtatgaatgattcagagcagtttgttggtagaatgcaagattaccggttttatcaaaca gcacttacaaatagagagattttagaggtgttctctggaaatttacctcacttgcattcc cagactaagtgccgctgccctggtagccacccacgtgtacatcctttggtacagaggtac tgtatccctaatggtgccgatgacacaaccaatgacagagttctgcgactaagccatgat gcccatcctttggactatatcaatgacaatgacattgggacatcttggatttcttctgta tttactaccttaacagaacttgacaaagggatgactattacagtcgatttacagaatgga cagtatcaggttttctatgttattctgcagtttctaagtccacagccagaagcagtcaaa attcagcgaaaaaagaggagagactccgagtgggaagactggcagtattttgctagaaac tgcagtatatttggaatggttaataatggtcttcttgaaaagccagactctgttaactgt cttcagcttcctgacaatgtcccatactctcgtggtaatgtgacatttagcatattaact cctgaacctaatccacgtattggctacaatgatttctacaatacaccaagtcttcaagaa tttgtcaaggccacacacatcaggatccacctccaaggccagtactacacttcccggcct tcagttgatttcagacatagatactatggtgtggatgagattactgttagtggaaggtgt aactgccatggtcatgctgatcagtgtgacacaagcctcgatccatatcagtgcttctgc catgaagagagtcacacagaggggaataagtgtgatcgttgtatgtcactttttaatgaa aaacctttccatcagggtgaccaagtgcattcatataattgcaagccttgccagtgctat aatcatgccacaagctgccactataacaatagtctggacccttttcctgaggatcatttc agaggtggaggtggagtatgtgataattgtcaacataatactacaggaagaaactgtgaa ctgtgcaagaatttcttctaccgggaactgggagccaatatttcggctgcagatgtttgt aaaccatgtgactgttatgaacctggcaccataaatggcagccttctatgtgataggatt ggaggccagtgtagctgtaagagacatgtgtctggcagacaatgtaatcagtgtcgggat ggattctataatctacgacagtcagaccctgatggctgtagtccttgtaactgtaatacc tctgggactgtcgatggagatattacctgtcaccaaaactcaggccaatgcaagtgcaag ccaaatgttattggaccaaggtgtgatcgctgcaactttggcttcaagctccttcacagc tctagcctgggtggatgtgaaccttgccagtgcaatatcaatggctccacaaaccagttt tgtaacccttttactggccaatgtaactgtaaagagcaagtcaagggacttcagtgcgat acctgcgttgacaacttatatggattgaaaagagatggttgcaattcctgtaattgtaat ttagcagggacagttcctaaaactgtgtgtgatgccaaaacaggccagtgtgtttgtaaa cccaatgttggaggacaaaggtgcgatgtatgcgtagatggatatcatagcctacagcaa agaaattccttaggctgtctgccttgtaactgtaataaagcaggtactgtggatggttct ttggtatgtgagaaatccacaggacagtgtccctgcaaggccaatgtcactggcctgtgg tgtaatcagtgcgtccctcagacctacaatctgaccttctccaaccttcaaggctgtcag gcttgtgattgtgaccccacagggacagtagaaggaacagtctgtaaccagagcagcggg cagtgtatctgcctgccaaatcgacagggaagaagatgtgaccagtgcaggccaggtttt tatctccctccattaaacacctttggctgcttgccatgtgattgccatatgactgggtca gtccatcagatctgcaatgatgtcataggccaatgcatttgtcaagacatttcggtaact gggcacagatgtgatcaatgcaagcagctttattttggatttaatcctgggacagggagc tgccagctttgtcattgtgatcccacaggaacctttaatggtacctgtcactcaatcact gggcagtgtttctgtaagctgtttgtaactggtttaaaatgtgacaactgcattcccaat gctagtcattttgatgctaacaacccactcggctgcactaaaactccatcacagcaacct cctcccttaggtcaagtgctaagttctgccatcataagcctgtcttggagtccacctgat tctcccaatagtcatctactaacatatgggctgtacagagatggcaaaaaaataaaatta acccaggaccaactcccatttggtatccaaaactacaatgatacaagtttgtctccttac acaatgtactcctattatattgaggcaagcaatgttcatggttctacaaggagcacaaca gtaagctatagaacaaaagctggtatccctactggaaaccttcatttagagtatagcagc ccagttggaccacgatccgtttcatttaattggacaactctttccaacttatctgggcct atagaaagatacatattagcatctacatctttaacagactctgaacctcatgaccattat gagggtttgcagacatcagttactgttacagatctggtcccttttacaaagtacaacttc tctgttcaagcatgcactagtggaggttgtgcagaaagcttacctttgacagttgttact gcgcaggctcccccagatggacaaaatcctccaacagttcaaaatttcagttccacagac ctctatgtggaatggtctccacctctggaacccaatggaataattataagatatgagctt tatatgcgagggcctttgaagtcaggtgattccaatcccccacttgagaagcgtgttttc catcacagtgggtggtttaaccctagacctgtgatagagtctgccaatgaaaatgcatta accccaccacagacgaacacaacagtcacagatttggagccatactccacatatgagttt cgagtttacgctgtaaatatggctggtagtacatattcagaatgggcagctgggaagact gcagaaggagctccggtgttcatgccaccaccatcagtatttcccctttcatcttcttct cttaatgtatcctggaaaaagcctaatgataatgaaacaaggggagaagtgattggctac aacattaacataattgaagaacagagcactaataaatttgctcctccagtactttcacag gtattatatagagcttcagcccatgtgcagtcctacacagtaacaggcctgagaccctac gggtcgtacaactttacgatcacactttgtaacctgattgattgtgtcaccagtgaacca ggcacagggcgaactttagcagcag

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