KEGG   Latimeria chalumnae (coelacanth): 102351007
Entry
102351007         CDS       T02913                                 
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03030  DNA replication
lcm03410  Base excision repair
lcm03420  Nucleotide excision repair
lcm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102351007 (RFC3)
   03410 Base excision repair
    102351007 (RFC3)
   03420 Nucleotide excision repair
    102351007 (RFC3)
   03430 Mismatch repair
    102351007 (RFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcm03032]
    102351007 (RFC3)
   03036 Chromosome and associated proteins [BR:lcm03036]
    102351007 (RFC3)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102351007 (RFC3)
DNA replication proteins [BR:lcm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102351007 (RFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    102351007 (RFC3)
Chromosome and associated proteins [BR:lcm03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102351007 (RFC3)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102351007 (RFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    102351007 (RFC3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_lid_RFC1 AAA_22 AAA_16 AAA_2 Sigma54_activ_2 nSTAND6 ABC_tran AAA_11 MyTH4 DUF815 ATPase_2
Other DBs
NCBI-GeneID: 102351007
NCBI-ProteinID: XP_006008564
Ensembl: ENSLACG00000009901
LinkDB
Position
Un
AA seq 356 aa
MSLWVDKYRPTSLGKLDYHKEQANQLRHLVQGGDFPHLLVYGPSGAGKKTRIMCVLRELY
GAGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQELLKTVAQSQQ
LETSTQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIPPIRSRCL
AVRVPAPSVEDICHVLSGVCKKEGLSLPQELARKIAEKSGRNLRKALLICEACRVQQYPF
SSDQDIPETDWEMYVRETANAIVNQQTPQRLLEVRGRLYELLTHCIPPEIIMKSLLSELL
NNCDGQLKGEVAQMAAYYEHRLQLGNKAIYHLEAFVAKFMAIYKKFLEDGLEGMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcctttgggtggacaaatacagacccacctctcttgggaaactggattaccacaag
gagcaggcgaaccagctgcggcacctggtacaaggaggtgatttcccccatttattagtg
tacggaccatcgggtgctggaaaaaagaccagaataatgtgtgtgctgcgtgaactgtat
ggtgcgggagtggagaaactaaggattgaacatcaaaccataactacaccttcaaagaaa
aaaattgaaattagtaccattgctagcaactatcaccttgaagttaaccctagtgatgct
gggaacagtgaccgggtggttattcaggagctattaaaaacagttgcacagtctcagcag
ctggagacaagtactcagagagactttaaagtggtgctgctaacagaggttgacaaactc
acaaaagatgcccagcatgccttaagaagaaccatggagaaatatatggcgacttgtagg
ttgattctgtgctgtaattccacatcaaaagtcatacctcctattcgcagcagatgcctg
gcagtgcgagtgcctgctcccagtgttgaagatatctgccacgtgctctctggtgtatgt
aagaaggagggactctctcttcctcaggagttggctcgaaagattgccgagaagtctggc
agaaatcttcgaaaggctctgctgatatgtgaggcctgcagagtccagcagtatcctttc
tcctcagaccaggatatacctgagacagactgggaaatgtacgtgagggagactgccaat
gccattgtcaatcagcaaacgccgcagaggctactggaagttcggggacgactttatgaa
cttctaactcactgcattccaccagagattataatgaagtctctgctatctgaacttcta
aataactgtgatggacagctgaaaggggaagtagcacagatggcagcttattatgagcat
cgcttacaattgggcaacaaggccatctatcacctggaagcatttgtggccaagttcatg
gccatttataagaagtttttggaagatggactggaaggcatgatgttctag

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