KEGG   Latimeria chalumnae (coelacanth): 102351180
Entry
102351180         CDS       T02913                                 
Symbol
BICC1
Name
(RefSeq) BicC family RNA binding protein 1
  KO
K18756  protein bicaudal C
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102351180 (BICC1)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102351180 (BICC1)
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_Mug60-KHD4 KH_2 KH_N4BP1_1st SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 102351180
NCBI-ProteinID: XP_006004780
Ensembl: ENSLACG00000010091
LinkDB
Position
Un
AA seq 972 aa
MAAQCDSLNGYLQHSDPGSNSERSTDSPLPVSEDDSSGTPALQDPEWSEERFRVDRKKLE
AMLQAAAEGKGRSGEDFFQKIMEDTNTQIAWPSKLKIGAKSKKDPHIKVAGKKENVREAK
EKIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEK
SNQVSIAGQPAGVESARARIRELLPLVLMFELPIAGILQPTPDPNSPAIQHICQTYNISV
SFKQRSRMYGATVIVRGSQNNTSAVKEGTAMLLDHLAGSLSSAIPVSTQLDIAPQHHLFM
MGRNGSNIKHIMQRTGAQIHFPDPSNPQKKSTVYLQGTIESVCLARQYLMGCLPLVLMFD
MKEDIEVEPQCITQLMEQLDVFISIKPKPKQPSKSVIVKSVERNALNMYEARKCLLGLES
SGVTMTSSTLTCPIGLSCHGLDILASAGLGLTGLGLLGPTTLSVNTSTAPNSLLNALNSS
ASPLQSPSSGAPSPTLWTTSLANTSSTPGFSTLQPLMIPAAAQATLASILLSGVPSYRHT
TPSPPPGLGPLDTHLNGLTSENRSSTSINGHIKSSNTGYNTISSSSLADKVLSSNHTETS
RQNTHSPTEQTSKSSPVEGSNDAFVEVGMPRSPSHSAGTSELKQMFSSSKPSCSKRQTVE
LLHGTKNSHLHTSERLLSDSERSATESTVADKKAPGSERAAERAAAQQNSERVRLAPQSS
YSNMQAFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANQVS
YKPSMSTTYEGSSMSLSRSNSREQVSCGSDSDNWRERNGISSASHNEFQSSIPSPKRKQN
KSTEHYLSSSNYMDCISSLTGSNGCNLNSSFKGSDLPELFSTLGLGKYTDVFQQQEIDLQ
TFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFDPPNIRSSFLEGGASGRLPRQ
YHSDIASISGRW
NT seq 2919 nt   +upstreamnt  +downstreamnt
atggcggctcagtgcgactctctgaacggatacctccagcactcggacccgggatccaac
agcgagcgcagcaccgactctcccctgccggtctctgaggacgactccagcggaactccg
gcacttcaggatcccgaatggagcgaagagcgattccgggtggacagaaagaaactcgag
gcaatgttacaagctgcagcagaggggaaaggcagaagtggtgaggatttctttcagaag
attatggaagacacgaatacacagattgcatggccatcgaagttaaaaattggggccaag
tcaaagaaagatccccatattaaagtcgctggaaagaaagaaaatgtgagagaggcgaag
gaaaaaatcatgtctgtgttggacacaaaaagcaatcgtgttacactgaagatggatgtg
tcacatacagaacattcacatgtgattggaaaaggagggaacaatatcaagaaggtgatg
gaagaaactggatgccacattcatttcccagattccaatagaaataaccaggcagaaaaa
agcaatcaggtatcgattgccggacagccagcaggagtggaatcggctagggcaagaatc
agggagctacttccattggtactgatgtttgaattacctatagctggtattctgcagccc
acaccagatccaaactctcctgctattcagcatatatgtcaaacttataacatttcggta
tcttttaaacaacgttctcgaatgtatggtgccacagtcattgttaggggttcccagaac
aacacaagtgctgtcaaggaagggactgccatgttgttggatcatctagctggcagccta
tccagtgcaatccctgttagcactcagctggatattgccccacagcaccatctcttcatg
atgggccgcaatggcagtaacatcaaacacataatgcaaagaacgggtgctcagatacac
ttccctgaccccagtaatccacagaagaaatctactgtctacctccagggcaccattgag
tctgtttgcctcgccagacaatatcttatgggttgccttcctcttgtgttgatgtttgat
atgaaggaagacattgaagtagaaccacagtgcattactcagctgatggaacagctagat
gtttttattagcattaaaccaaagcctaaacagccaagcaagtctgtgatagtaaaaagt
gtagaaagaaatgccttaaatatgtatgaagcaagaaagtgccttctgggactggaaagt
agcggtgttacaatgacctcatctacattaacatgtcctattggattgtcttgccatggg
ttggacattttggcatcagcaggactcggactcactggacttggtttgttgggtcccact
actttatctgtaaacacttccacagcacccaattctctcctgaatgcacttaacagttct
gctagccccttgcagagtcccagttcaggcgcacctagtcctacactctggaccacatca
cttgccaacacttcaagtacacctggtttttctactcttcaacctcttatgatcccagca
gcagcacaagccacattagccagcattctgttatcaggggtgccaagctataggcatacc
accccatctcctccacctggtttgggtcctttagacacccatctgaatggcttaacatca
gaaaacagaagttcaacatctatcaatggtcatataaagtcttcaaatactggttacaac
acaatatcatcatcatctctagcagataaggtgctaagctcaaaccacactgaaacctca
agacaaaatacccacagtcccacagaacaaacaagcaaatccagtcctgtagaaggttct
aatgatgcttttgtggaagtgggcatgccgagaagtccctctcattcagctggtaccagt
gaacttaaacagatgtttagttcatcgaaaccctcttgttccaagagacagactgttgag
ttgctacatggcaccaagaactcacacctacacacgtcagaaagactgctttctgattct
gaacgaagtgctacagagagcactgtagctgataaaaaagcacctggaagtgaacgggct
gcagaaagggcagcagcacagcagaactcagagagagtgcgtcttgctccacagtcaagc
tacagcaatatgcaggcatttgactacgaacagaagaaactgttagcaaccaaagcgatg
ttaaagaagccagtggttacagaagtgagaactccaaccaatacctggagtggtcttgga
ttttccaaatcaatgcctgcagaaacaatcaaagaactcagaagagctaaccaagtatca
tataaaccatctatgtcaacaacatatgagggctcatctatgtccttgtcacggtccaac
agtcgagaacaagtcagctgtggtagtgactcggataactggagagaacgcaatggtatc
agttctgcatctcacaatgaattccaatcatccatacctagtccaaaaagaaaacaaaat
aaatctacggaacactatctaagcagtagtaattacatggactgcatttcttcactgacg
ggcagcaatggctgtaacttgaacagttcattcaaagggtctgacctgcctgagctcttc
agtacactgggcctgggcaagtacactgatgtgttccagcaacaagagattgatctccag
acatttctgacacttacagatcaagatttaaaagagcttggtattactacatttggtgca
agaagaaaaatgttacttgcaatctcagaattgaacaaaaatagaagaaagctatttgac
cctccaaacattcgttcttcattccttgaaggtggggccagtggaaggttgccgcggcag
tatcactctgacattgccagtattagtggtcgctggtag

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