Latimeria chalumnae (coelacanth): 102351285
Help
Entry
102351285 CDS
T02913
Symbol
PCDH7
Name
(RefSeq) protocadherin 7
KO
K16498
protocadherin delta 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102351285 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcm01009
]
102351285 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcm04515
]
102351285 (PCDH7)
Protein phosphatases and associated proteins [BR:
lcm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102351285 (PCDH7)
Cell adhesion molecules [BR:
lcm04515
]
Cadherins
Protocadherins
102351285 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
KIAA1549
Adeno_E3_CR2
LYRIC
MLANA
Motif
Other DBs
NCBI-GeneID:
102351285
NCBI-ProteinID:
XP_014353071
LinkDB
All DBs
Position
Un
AA seq
1110 aa
AA seq
DB search
MRTLGCANHWFYWFFLLRLSSALAASKQELKYRLAEEGPADIRIGNVASDLGIVTGSGEV
TFSLESGYEYLKIDNITGELSTTDRRIDREKLPQCQMIFDENECFIDFEVSVIGPSQSWV
DLFEGKVIIIDINDNTPSFPSPVLTLTVEENRPVGTLYLLPTATDRDFGKNGIERYELSQ
QEFGEGSYSSGRRGATGAGARLEAGDGALYSGKRRMDPEGRSSMFELQVADTSDGEKQPQ
LIVKGALDREQRDSYELTLRVRDGGDPPKSSQAILRVLITDVNDNSPRFEKSVYEADLAE
NSSPGTPILQLKASDSDVGVNGQIEYVFGAATESVRRLLRLDENTGWLSVLHRIDREEVS
QLRFTVMARDRGQPPKTDKATVILNIKDENDNVPLIDIRKIGRIPLKDGVANVSEDVLVD
TPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPARETEGEQSKKKYFLHTSAPLDYEATK
EYNVIIVAVDSGSPSLSSNNSLIVKVGDTNDNPPMFSQALVEVPFPENNAPGERVATILA
TDADSGRNAELAYSLDSSVAGIFSVDPDSGNIIANTVLDREQTDRYEFKVIAKDKGTPVL
QGTASVVVQVADTNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGHNAEMSLFIE
EDNGIFSIENNTGTIYSTVAFDREQQTFYTFKVKAVDGGEPSRSATATVSLFVMDENDNA
PTVTSPSNNSYTLLAPSSNVRTVVDTVFATDSDTGINAELNYSIIGGNPYKLFEIDSISG
VISLVGKLAQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESISNATIVKAQISRSLHT
PLNQDIAGDPNYEMSKQRLSIVIGVVAGIMTVILIILVVVMARYCRPKNKNGYEAGKKDH
EDFFTPQQHDKSKKPKKDKKNKKTKQPLYSSIVTVEASKHNGQRYDSVNEKLSDSPGMGR
YRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPGAGKKHQAVQELPPANTFVGAGDNISI
GSDHCSEYSCQTNNKYSKQSYTTLQVRLMSKKQKIAFKKMKKLLKYAKTYFYKRLLSPST
VEWLSLLYKISTILIKQGESGFCLCADDDS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaggactttgggatgtgcgaatcactggttttactggttctttctgctgcggctctcc
tcggctctggcggcttccaagcaagagttgaagtaccggctggcagaagagggacccgcc
gacatccggatagggaatgtggcttcggatttggggatcgtcaccggctccggcgaggtg
acatttagcctggagtccggctacgaatatttaaagatcgacaacatcaccggcgaactc
agcaccaccgaccgaaggatcgaccgggaaaaactaccgcagtgccagatgatctttgat
gaaaatgagtgcttcatagattttgaagtttcggttatcggaccctcgcagagctgggtc
gatctcttcgaagggaaggtgattataatcgatattaacgacaacaccccttctttcccc
tcgccggtcctcacgttgacggtggaggagaacagacccgtggggaccttgtacttgctc
cccacagccaccgatcgggacttcggcaagaacgggattgagcggtacgagctgagccag
caagagtttggggaaggctcgtacagctctggccggcgaggggccaccggcgctggggcg
cgcctggaagccggcgatggcgccctctactcaggcaagagaaggatggatcctgagggg
agaagcagcatgtttgagctgcaagttgcggacacctccgatggggaaaagcagcctcag
ttgatcgtcaaaggtgccctggaccgagagcagagggattcctacgagctcactctcagg
gtcagggatggcggcgacccccctaaatcttcccaagccattctgcgggtattgatcacc
gatgtcaatgacaacagtccacgttttgagaaaagcgtgtacgaagcagatctggctgaa
aatagttctcccgggacaccgatccttcagctgaaagccagtgattccgatgtaggcgta
aatggacaaattgaatatgtttttggggctgctactgagtctgtacggcggcttctaaga
ctggatgaaaatactggatggttaagtgttttgcaccgcattgatcgggaagaagtcagc
caactccgcttcactgtaatggcaagggatcgagggcaacctccaaaaacggacaaagca
acagtgatccttaacattaaagatgaaaacgacaacgtgcctttaatagatattagaaag
attggaagaatacctttaaaggacggggtagccaatgtttcagaagatgtgttggtagat
acccctattgctctagtacaagtatcggacagagaccaaggggaaaacggagtagttacc
tgcactgttgtgggagatgtcccgtttcagcttaagcctgctagagagaccgaaggcgag
cagagcaaaaagaaatatttcttgcacacatctgcaccactggactatgaagccactaag
gaatacaatgtgattattgtagctgtagattctggaagccccagtctgtccagtaataat
tccctaattgtaaaggttggcgacacaaatgataatcctccgatgtttagtcaagcgttg
gtggaggtgcctttccctgaaaataatgccccaggagagagagtggctacgatccttgct
actgatgcagacagtggtcgaaatgccgagcttgcttactccttggactcttctgttgca
gggatcttttctgttgatccagattcaggaaacatcattgctaataccgttttagatagg
gagcaaactgatagatatgaattcaaagttattgccaaagataagggcacccctgttctc
caaggaactgcatctgttgtagttcaagtggcagacacaaatgacaatgatcccaagttt
atgcaggacgtatttacattttatgttaaggaaaatttgcagcctaatagtccggttgga
atggttacagtgatggatgctgacaaaggacataatgcagagatgtctttatttattgaa
gaggacaatggcattttttccattgaaaataataccgggacaatttactccactgtggct
tttgacagggaacagcagactttttacacattcaaagttaaggcagttgatggaggagag
ccctctagatcggccacagctactgtatcgttatttgtgatggatgaaaatgacaacgca
cctacggtcacttctcccagtaacaattcttatactctgttagcaccttccagtaacgta
agaacagttgttgacactgtgttcgcaactgacagtgacacaggaataaatgctgaatta
aactacagcattattggaggaaacccttacaaactgtttgaaatcgattctattagtggt
gtcatttctttagtgggaaagttggctcaaaagcattatggtctccatcggttagtggta
caagtcaatgacagtggtcagccatcacagtcaactacaacacttgttcatgtatttgtc
aatgaaagtatctctaatgccaccatagtgaaagcccagatttcaagaagtctgcacact
cctttgaatcaagacattgcaggtgatcccaactatgaaatgagcaagcaacgattaagc
atagtcattggtgttgtagcgggaataatgactgtcattttgatcattttagttgttgtc
atggctaggtactgtaggccaaagaacaagaatggttatgaggctggtaaaaaagatcat
gaagactttttcactcctcaacagcatgacaaatctaaaaagcctaaaaaggataagaag
aataaaaaaaccaagcagcctctgtacagcagcattgtgacagtagaggcttcaaaacat
aatgggcagaggtacgatagtgttaatgagaagctatcagacagccccggcatggggcgt
tatcggtctgtcaatgggggcccaggtagccctgacctagctagacattataaatctagc
tctcctttgcccacagttcaacttcaccctcagtcaccaggtgctgggaagaaacatcaa
gctgtacaggaactgccaccagctaatacctttgttggagcaggggacaatatttcaatt
ggatcagaccactgttctgagtacagctgccaaactaataataaatacagcaaacagagt
tacacaactcttcaagttagactaatgagcaaaaagcagaagattgcattcaagaaaatg
aaaaagctcctaaaatatgcaaaaacatacttttataagagattgctgagcccatccaca
gtagaatggttgtcattactttacaaaatctcaacaattcttatcaaacaaggagaaagc
ggcttctgtctgtgtgctgatgacgactcttag
DBGET
integrated database retrieval system
