Latimeria chalumnae (coelacanth): 102351308
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Entry
102351308 CDS
T02913
Symbol
USB1
Name
(RefSeq) U6 snRNA biogenesis phosphodiesterase 1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102351308 (USB1)
Spliceosome [BR:
lcm03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
102351308 (USB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HVSL
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-GeneID:
102351308
NCBI-ProteinID:
XP_006014113
Ensembl:
ENSLACG00000000105
LinkDB
All DBs
Position
Un
AA seq
251 aa
AA seq
DB search
MSGLLVSYSSSSEEGEAEPRGRDETEEKRDQRGKRERESYQRPKRCKKDLQSRPPDAADA
RLPVPESVLKMFGEGEEEEGHEDRARHSGRMRTFPHERGNWATHVYVPYQTDEDFHELLD
LLVSHLRHCAVRLTTVEEFHVSLSQTVALRYHWIEPFVQSLKERLAPFPRFYCTVERVKV
YTNQEKTRTFLGLEVSTGHDQLLELVSEVDKTMEEFDLKTFYKNPSFHMSLAWCVGDSTQ
KLSGKCLQDLQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccttctggtgagttacagcagcagctcggaggagggcgaagccgagccaaga
ggcagagatgaaacagaggaaaaaagggaccagagaggcaagagggaacgagagtcatac
cagcgacccaaaagatgcaaaaaggaccttcagtccaggcctccagatgctgcagacgca
cgcctgccggtgcccgagagcgttttgaagatgttcggggaaggcgaggaagaggagggg
catgaggaccgagcaaggcacagcgggcggatgcggacgttccctcacgagcgagggaac
tgggcaactcatgtgtatgtgccgtaccagacagacgaggattttcacgagctgcttgac
ctcctggtctcccacctgcgccactgcgccgtccgcctgactacagtggaggagtttcac
gtcagcctgtcgcagactgtggcgctgcgctatcactggatcgagcccttcgtccagtcc
ctgaaggagcgcctggccccctttcccaggttttattgcacagtggaacgagtgaaggtt
tatacaaaccaggagaagacgagaaccttcctgggtttggaggtatctactgggcacgat
cagttactggagctggtttctgaagtggacaaaaccatggaggagtttgatttaaaaacc
ttttataagaatccttctttccatatgagtttggcctggtgtgttggggattcaactcag
aagctcagtggaaaatgcctccaagacttacag
DBGET
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