| Entry |
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| Symbol |
COL4A1
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| Name |
(RefSeq) collagen type IV alpha 1 chain
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| KO |
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| Organism |
lcm Latimeria chalumnae (coelacanth)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:lcm00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102351330 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102351330 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102351330 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:lcm04147]
102351330 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:lcm00536]
102351330 (COL4A1)
Exosome [BR:lcm04147]
Exosomal proteins
Exosomal proteins of other cancer cells
102351330 (COL4A1)
Glycosaminoglycan binding proteins [BR:lcm00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
102351330 (COL4A1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Un
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| AA seq |
1202 aa
MLIWKSFWLFTAVLAGGIQSAAAAACADCGKKCDCSGVKGQKGERGLPGLHGPVGFPGMQ
GPEGHPGPQGLKGNTGEPGLAGAKGIRGPPGSPGFPGNPGLPGIPGQDGPHGPPGIPGCN
GTKGDKGIQGLPGLPGLQGFQGPAGSPGIKGDPGGIIGIGTFLKGEKGFPGYPGTLGVPG
LPGAAGPVGPRGPTGQPGPPGPPGFPGQKGNMGLNLQGPKGEKGDQGLQGPPGPNQAVVG
APEDRFIPGLKGEKGDLGPKGTPGTPGICGLNCKGEKGERGRPGPRGKSGKDGEPGFNGS
QGESGVPGEPGSPGYKGIQGEKGERGVPGPVGVVTTVAGQVVFGQKGDAGHPGEPGLKGE
QGLAGPPGFPGQTGSPGLPSHGLPGPPGLPGVRGQKGDQGFPGLSLPGPKGRDGIPGETG
QPGSPGAPGEPNIKEECPRGAPGAPGITGLQGLPGFQGEMGQKGAKGETCNNCTQSGTGL
PGLPGPRGPLGPPGPKGEQGNKGEVGQPGKLGHEGPSGPPGLTGLMGAPGAKGEPGDVQF
HPQLKGNKGDPGIPGQPGTPGRDGRPGKDGQPGIPGQKGESATIGFKGEPGPQGDPGFPG
IYGERGPPGHPGTGNPGIPGDKGDQGIPGRPGLPGIQGPKGDPAQIEIKPGPNGPPGLPG
LKGLQGHQGNPGTQGLQGNPGLPGQKGEPGPSGYGNPGPPGAKGYQGMPGAPGSPGTPGH
PGIDGLPGTEGALGPKGEPGLGLPGPRGDPGLKGLDGFPGEKGTKGLPGIPGDQGQPGPP
GAPGAQGLPGPHGAFGSKGEKGNQGFPGRSGIPGLKGDRGFPGFPGNAGLPGLNGQKGEK
GLTGVPGFPGQKGSLGLLGLKGEQGDQGFPGPKGNDGQPGPPGPIQFEKGEPGLPGLPGP
QGPRGLPGSAGLKGTQGATGIAGPPGSDGGPGFDGVPGQKGDPGPTGPPGPRGYTGPPGP
EGLPGPTGFPGPPSMAHGFLVTRHSQTTEVPLCPEGTTKIYDGYSLLYVQGNERAHGQDL
GTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMNMAPITGNNIKPFVSR
CSVCEAPAMIMAVHSQTIQIPPCPPEWISLWIGYSFVMHTSAGSEGSGQAIASPGSCLEE
FRSAPFIECHGRGTCNYYANAYSFWLATIENNEMFRKPVPATLKAGELRTHISRCHVCMK
RT |
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| NT seq |
3609 nt +upstreamnt +downstreamnt
atgctcatctggaagagcttctggcttttcacggctgtcctcgccggcggaattcaaagt
gcagcagctgcggcatgtgctgactgtgggaaaaaatgtgactgcagtggagtgaaagga
cagaagggtgaaaggggattgcctgggttacatggtcctgtaggatttcctggaatgcag
ggccccgagggtcacccagggccacagggtctcaagggcaacactggagaacctgggtta
gcaggagcaaaaggcatcaggggacctccaggttcaccaggatttcctggaaaccccggc
cttcctggtatcccaggtcaggatggcccacatggcccaccaggtatcccaggatgtaat
ggcactaagggtgataaaggtattcagggtctgcctggtttgccaggattgcaaggattt
caaggtcctgctggttctccaggaattaagggagatccagggggtataattggaattggt
acttttctaaagggtgaaaagggttttcctggctaccctggaacactgggtgttcctggt
ttgccgggagcagctggcccagtaggcccacgtggtccaacaggacaaccaggtcctcct
ggtccacctggttttccaggccaaaagggtaatatgggtttgaatctccaaggaccaaag
ggtgagaagggtgatcaaggtctccagggcccaccaggaccaaatcaagctgtagtagga
gcaccagaggaccgatttatacctggattaaagggtgaaaaaggtgatctcggtcccaaa
ggtactcctggaacgccaggtatatgtggcttgaactgtaaaggagaaaaaggtgaacgt
ggaagaccaggccccaggggaaaatctggtaaagatggtgagccaggattcaatggatca
caaggggagtcaggtgttccaggagaaccagggtcacctggatataaaggcatacagggt
gagaaaggtgaaagaggtgttccaggtccagttggagttgtgactactgttgctggacag
gtagtgtttggtcagaaaggcgatgcaggccatccaggtgaaccagggttaaagggggag
caaggtttagcaggtcctccgggttttccaggtcagacaggttctccaggtctaccaagc
catgggcttcccggcccacctggattgccaggggttcgaggtcagaagggtgaccaagga
tttccaggattatctctaccaggaccaaaaggaagagatggtatccctggggagactggt
caacctggctctccaggtgccccaggcgaaccaaatataaaggaagagtgcccgaggggt
gcacctggagctcctggcatcactggacttcaaggactgccaggatttcaaggagagatg
ggacagaaaggtgccaaaggagaaacctgtaacaattgtactcagagtggaactggactg
cctggactcccaggaccacggggtcctctaggaccaccaggtcccaaaggggagcaagga
aataagggtgaagtaggccaacctggaaaacttggtcatgaaggtccatctggcccccca
ggtttgacaggattaatgggtgctcctggagcaaagggtgagcctggtgatgttcaattt
caccctcaacttaaaggaaataaaggagacccaggaatcccaggtcaaccaggtactcca
ggaagagatggaagaccaggaaaagatggccaaccaggaattccagggcagaagggtgaa
tcagctacaattggttttaaaggcgaacctggcccacaaggtgaccctggttttcctgga
atctatggtgaaaggggccctcctggtcatccaggcactggcaatcctggtattcctggt
gacaaaggggatcaaggaattccaggacgcccaggtcttcctggcatccaaggaccaaag
ggtgacccagcacaaattgaaataaagcctggaccaaatggtcctcctggtcttccagga
ttaaaaggtctgcaaggacatcaaggtaaccctggcactcaaggacttcaaggtaatcca
ggacttcctggacaaaaaggtgaaccaggaccatccgggtatggaaatccaggtccaccc
ggtgctaaaggttatcaaggaatgccaggagcaccaggcagtcctggaactccaggacat
ccaggaatagatggcttgccaggtacggaaggtgcacttggaccaaagggagagccagga
ttaggcctaccaggtcccaggggagacccaggtcttaaaggcctagatggttttccagga
gaaaaaggaactaaagggctacctggtataccaggagatcaaggtcaaccaggtccacct
ggtgcaccaggtgctcaaggattgcctgggcctcatggagcttttggttcgaaaggagag
aaagggaatcagggattccctgggcggtcaggtataccaggccttaagggtgaccgtgga
ttccctggttttccaggaaatgctggcctgccaggtcttaatggtcagaagggtgaaaaa
ggactaacaggagttcccggattcccaggtcagaaaggttctttaggtcttctgggcctg
aaaggtgaacaaggagatcaaggttttcctggacctaaaggtaatgatggtcaaccaggg
cctcctggccccattcaatttgaaaaaggagaacccggtttgcctggccttccagggcca
caaggtccaagggggctacctgggtctgcaggtctcaagggaacacaaggtgcaacagga
attgctggcccacctgggagcgatggaggccctggatttgatggtgtacctggtcagaaa
ggtgatcctggtccaactggacctccaggcccaaggggatatacaggcccaccaggccct
gagggtttaccaggacccactggttttccaggaccaccatcaatggctcatggatttctt
gtgaccagacatagtcagacaactgaagtgcccttgtgccctgagggaacaaccaaaatc
tatgatggttactctttgctttatgtacaaggcaatgaaagagcacatggacaagattta
ggcactgctggaagttgtcttcggaaattcagtactatgccattcctattctgtaacatc
aacaacgtgtgcaactttgcatctaggaatgactactcctattggctatctactccagaa
ccaatgcctatgaatatggctcctattactggtaataacatcaagccatttgtaagcagg
tgctctgtttgtgaagctcctgcaatgatcatggcagtgcacagtcagacaattcagatc
cctccatgtcctcctgaatggatatctctatggattggctattcttttgttatgcacaca
agtgctggttcagagggctcagggcaggctatagcttctcctggttcatgcttagaagag
ttccgaagtgcaccgttcattgagtgtcacggtcgtggcacctgcaactattatgccaat
gcctacagtttctggcttgccactatagagaacaatgaaatgttcaggaaacctgtccca
gcaaccctgaaggcaggagagctgcgcacacacatcagtcgttgtcatgtttgtatgaag
agaacataa |
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