Latimeria chalumnae (coelacanth): 102351330 Help Entry 102351330         CDS       T02913                                  Symbol COL4A1 Name (RefSeq) collagen type IV alpha 1 chain   KO K06237   collagen type IV alpha Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm04382   Cornified envelope formation lcm04510   Focal adhesion lcm04512   ECM-receptor interaction lcm04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lcm00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102351330 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102351330 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102351330 (COL4A1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     102351330 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:lcm04147]     102351330 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:lcm00536]     102351330 (COL4A1) Exosome [BR:lcm04147]  Exosomal proteins   Exosomal proteins of other cancer cells    102351330 (COL4A1) Glycosaminoglycan binding proteins [BR:lcm00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102351330 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  102351330 NCBI-ProteinID:  XP_014345939 LinkDB All DBs Position Un AA seq 1202 aa AA seqDB search MLIWKSFWLFTAVLAGGIQSAAAAACADCGKKCDCSGVKGQKGERGLPGLHGPVGFPGMQ GPEGHPGPQGLKGNTGEPGLAGAKGIRGPPGSPGFPGNPGLPGIPGQDGPHGPPGIPGCN GTKGDKGIQGLPGLPGLQGFQGPAGSPGIKGDPGGIIGIGTFLKGEKGFPGYPGTLGVPG LPGAAGPVGPRGPTGQPGPPGPPGFPGQKGNMGLNLQGPKGEKGDQGLQGPPGPNQAVVG APEDRFIPGLKGEKGDLGPKGTPGTPGICGLNCKGEKGERGRPGPRGKSGKDGEPGFNGS QGESGVPGEPGSPGYKGIQGEKGERGVPGPVGVVTTVAGQVVFGQKGDAGHPGEPGLKGE QGLAGPPGFPGQTGSPGLPSHGLPGPPGLPGVRGQKGDQGFPGLSLPGPKGRDGIPGETG QPGSPGAPGEPNIKEECPRGAPGAPGITGLQGLPGFQGEMGQKGAKGETCNNCTQSGTGL PGLPGPRGPLGPPGPKGEQGNKGEVGQPGKLGHEGPSGPPGLTGLMGAPGAKGEPGDVQF HPQLKGNKGDPGIPGQPGTPGRDGRPGKDGQPGIPGQKGESATIGFKGEPGPQGDPGFPG IYGERGPPGHPGTGNPGIPGDKGDQGIPGRPGLPGIQGPKGDPAQIEIKPGPNGPPGLPG LKGLQGHQGNPGTQGLQGNPGLPGQKGEPGPSGYGNPGPPGAKGYQGMPGAPGSPGTPGH PGIDGLPGTEGALGPKGEPGLGLPGPRGDPGLKGLDGFPGEKGTKGLPGIPGDQGQPGPP GAPGAQGLPGPHGAFGSKGEKGNQGFPGRSGIPGLKGDRGFPGFPGNAGLPGLNGQKGEK GLTGVPGFPGQKGSLGLLGLKGEQGDQGFPGPKGNDGQPGPPGPIQFEKGEPGLPGLPGP QGPRGLPGSAGLKGTQGATGIAGPPGSDGGPGFDGVPGQKGDPGPTGPPGPRGYTGPPGP EGLPGPTGFPGPPSMAHGFLVTRHSQTTEVPLCPEGTTKIYDGYSLLYVQGNERAHGQDL GTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMNMAPITGNNIKPFVSR CSVCEAPAMIMAVHSQTIQIPPCPPEWISLWIGYSFVMHTSAGSEGSGQAIASPGSCLEE FRSAPFIECHGRGTCNYYANAYSFWLATIENNEMFRKPVPATLKAGELRTHISRCHVCMK RT NT seq 3609 nt NT seq  +upstreamnt  +downstreamnt atgctcatctggaagagcttctggcttttcacggctgtcctcgccggcggaattcaaagt gcagcagctgcggcatgtgctgactgtgggaaaaaatgtgactgcagtggagtgaaagga cagaagggtgaaaggggattgcctgggttacatggtcctgtaggatttcctggaatgcag ggccccgagggtcacccagggccacagggtctcaagggcaacactggagaacctgggtta gcaggagcaaaaggcatcaggggacctccaggttcaccaggatttcctggaaaccccggc cttcctggtatcccaggtcaggatggcccacatggcccaccaggtatcccaggatgtaat ggcactaagggtgataaaggtattcagggtctgcctggtttgccaggattgcaaggattt caaggtcctgctggttctccaggaattaagggagatccagggggtataattggaattggt acttttctaaagggtgaaaagggttttcctggctaccctggaacactgggtgttcctggt ttgccgggagcagctggcccagtaggcccacgtggtccaacaggacaaccaggtcctcct ggtccacctggttttccaggccaaaagggtaatatgggtttgaatctccaaggaccaaag ggtgagaagggtgatcaaggtctccagggcccaccaggaccaaatcaagctgtagtagga gcaccagaggaccgatttatacctggattaaagggtgaaaaaggtgatctcggtcccaaa ggtactcctggaacgccaggtatatgtggcttgaactgtaaaggagaaaaaggtgaacgt ggaagaccaggccccaggggaaaatctggtaaagatggtgagccaggattcaatggatca caaggggagtcaggtgttccaggagaaccagggtcacctggatataaaggcatacagggt gagaaaggtgaaagaggtgttccaggtccagttggagttgtgactactgttgctggacag gtagtgtttggtcagaaaggcgatgcaggccatccaggtgaaccagggttaaagggggag caaggtttagcaggtcctccgggttttccaggtcagacaggttctccaggtctaccaagc catgggcttcccggcccacctggattgccaggggttcgaggtcagaagggtgaccaagga tttccaggattatctctaccaggaccaaaaggaagagatggtatccctggggagactggt caacctggctctccaggtgccccaggcgaaccaaatataaaggaagagtgcccgaggggt gcacctggagctcctggcatcactggacttcaaggactgccaggatttcaaggagagatg ggacagaaaggtgccaaaggagaaacctgtaacaattgtactcagagtggaactggactg cctggactcccaggaccacggggtcctctaggaccaccaggtcccaaaggggagcaagga aataagggtgaagtaggccaacctggaaaacttggtcatgaaggtccatctggcccccca ggtttgacaggattaatgggtgctcctggagcaaagggtgagcctggtgatgttcaattt caccctcaacttaaaggaaataaaggagacccaggaatcccaggtcaaccaggtactcca ggaagagatggaagaccaggaaaagatggccaaccaggaattccagggcagaagggtgaa tcagctacaattggttttaaaggcgaacctggcccacaaggtgaccctggttttcctgga atctatggtgaaaggggccctcctggtcatccaggcactggcaatcctggtattcctggt gacaaaggggatcaaggaattccaggacgcccaggtcttcctggcatccaaggaccaaag ggtgacccagcacaaattgaaataaagcctggaccaaatggtcctcctggtcttccagga ttaaaaggtctgcaaggacatcaaggtaaccctggcactcaaggacttcaaggtaatcca ggacttcctggacaaaaaggtgaaccaggaccatccgggtatggaaatccaggtccaccc ggtgctaaaggttatcaaggaatgccaggagcaccaggcagtcctggaactccaggacat ccaggaatagatggcttgccaggtacggaaggtgcacttggaccaaagggagagccagga ttaggcctaccaggtcccaggggagacccaggtcttaaaggcctagatggttttccagga gaaaaaggaactaaagggctacctggtataccaggagatcaaggtcaaccaggtccacct ggtgcaccaggtgctcaaggattgcctgggcctcatggagcttttggttcgaaaggagag aaagggaatcagggattccctgggcggtcaggtataccaggccttaagggtgaccgtgga ttccctggttttccaggaaatgctggcctgccaggtcttaatggtcagaagggtgaaaaa ggactaacaggagttcccggattcccaggtcagaaaggttctttaggtcttctgggcctg aaaggtgaacaaggagatcaaggttttcctggacctaaaggtaatgatggtcaaccaggg cctcctggccccattcaatttgaaaaaggagaacccggtttgcctggccttccagggcca caaggtccaagggggctacctgggtctgcaggtctcaagggaacacaaggtgcaacagga attgctggcccacctgggagcgatggaggccctggatttgatggtgtacctggtcagaaa ggtgatcctggtccaactggacctccaggcccaaggggatatacaggcccaccaggccct gagggtttaccaggacccactggttttccaggaccaccatcaatggctcatggatttctt gtgaccagacatagtcagacaactgaagtgcccttgtgccctgagggaacaaccaaaatc tatgatggttactctttgctttatgtacaaggcaatgaaagagcacatggacaagattta ggcactgctggaagttgtcttcggaaattcagtactatgccattcctattctgtaacatc aacaacgtgtgcaactttgcatctaggaatgactactcctattggctatctactccagaa ccaatgcctatgaatatggctcctattactggtaataacatcaagccatttgtaagcagg tgctctgtttgtgaagctcctgcaatgatcatggcagtgcacagtcagacaattcagatc cctccatgtcctcctgaatggatatctctatggattggctattcttttgttatgcacaca agtgctggttcagagggctcagggcaggctatagcttctcctggttcatgcttagaagag ttccgaagtgcaccgttcattgagtgtcacggtcgtggcacctgcaactattatgccaat gcctacagtttctggcttgccactatagagaacaatgaaatgttcaggaaacctgtccca gcaaccctgaaggcaggagagctgcgcacacacatcagtcgttgtcatgtttgtatgaag agaacataa

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