Latimeria chalumnae (coelacanth): 102351350
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Entry
102351350 CDS
T02913
Symbol
FGD1
Name
(RefSeq) FYVE, RhoGEF and PH domain containing 1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102351350 (FGD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
PH_11
FYVE_2
SOS1_NGEF_PH
PH_15
Motif
Other DBs
NCBI-GeneID:
102351350
NCBI-ProteinID:
XP_006005470
Ensembl:
ENSLACG00000010638
LinkDB
All DBs
Position
Un
AA seq
942 aa
AA seq
DB search
MHGNRPKSAVLNFPPASPVDHSGSYSHQFKTMRFSYHIGRVMPSPKTLHRSGSASGPRPL
AKSTSQETSPCSERREGPQRLRSDPGPSTSSDCSGATEEFSSPKPSPLKRPPGPKPQVPP
KPSNLQSIRRSRLSEPIPPPPSRPLPANPRPGKGPLQRAESRDGAGPSCVTSLIEKFERE
PIIVVPDMSCFSPSPAIDITLENGSKGEESQTSGPEKSCKTEHRNSLESGYSTADLTHKF
LNLLEMQDLTDQSGYSTDSLESRPGLREEAAPSLLPVHDASGKLTNRDSGIDSISSPSNC
EEICFVSEEQVGEEKGGEFESASVVSPPTGRKRRSTRDSELDSDLEEGSGDETEQQQQPQ
QPPPKTERQDSTEFTSQQKVFNIASELLQTEKAYVSRLHLLDQVFCARLMEEARTRNSFP
VEVVMGIFSNICSIYCFHQQFLLPELEKRMQEWDTNPRIGDILQKLAPFLKMYGEYVKNF
DRAMELVSTWMERSAQFATIVHDIQKEEVCGSLSLQHHMLEPVQRIPRYELLLKDYLKKL
PDDSPDNKDAEKSLELIATAAEHSNAAIRKMERMHKLLKVYELLGGEEDIMSPTNELIKE
GHILKLSAKNGTTQDRYLILVLLHPFIGNPLKETSSLNMSRTFLVSGKQRSLELQARTEE
EKKDWIQAIQMTMQAHEQTLETFKLLNTSCREEEETPPNSPSTDLGKRAPTPIREKEVTM
CMRCQEPFNSITKRRHHCKACGHVVCGKCSDFRARLVYDNNRTNRVCVDCYTALHGPPSS
PGYQQHTPQRRKSILEKQASVVAENSVICSYLYYLEKGGKSWQKAWLVIPENEPLVLYIY
GAPQDVKAQRSVPLIGFEVGLPEPADKVERRHAFQIRQSHLTLYFSAEREELQRRWMDVL
LRAGRGEDHGAAAAAAAPQSISEADEELEGVEVFEKAVSENT
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcatggaaacagacccaaaagtgccgtccttaattttcctcctgccagcccagtagac
cattctggatcttactcccaccagttcaaaactatgaggttttcttaccatattgggagg
gtaatgcccagcccaaagacccttcacagatctggttctgcctctggacccaggccacta
gcgaagagcacgtcccaggagaccagcccgtgctcagaacgccgagagggcccccaacgc
ctgcgctccgatcccggaccctccaccagctccgactgcagtggggccactgaggagttt
tccagccccaaaccgtcgcccttgaagagacccccaggaccaaagcctcaggtaccgccc
aagccctccaacctccagagcatccggcgctctcgcctttcagagccaattcctccacca
ccgtcccgcccgcttccagcaaacccccgccccgggaagggccccttgcagcgagccgag
agcagggatggagcgggaccgtcctgcgtcacctcgcttattgagaagtttgaaagggag
ccgataatagtagttccagatatgagctgcttcagccccagtccagccatagatatcacc
ctggaaaacgggtcaaagggggaagaatcccagaccagcggacccgagaaaagctgcaag
acagagcatcggaattccctggagtcgggctacagcacagctgacctgactcacaagttc
ctgaacctcctggagatgcaggacctgacggaccagtcgggatactccacggacagcttg
gagagccggccgggcctgcgggaggaggcggccccgtcgctgctccccgtgcacgacgcc
agcggcaagctgaccaaccgggacagtgggatcgacagcatcagctccccctccaactgc
gaggagatctgctttgtcagcgaggagcaggtgggagaggagaagggcggggagtttgag
tccgccagcgtggtgtcgccccctactgggcgcaagaggcggtccacccgggactcggag
ctggacagtgaccttgaagaagggagcggggatgaaactgagcagcagcagcagccacag
cagccgccccccaaaacagagcggcaggactccaccgagttcacatctcaacagaaggtg
tttaacattgccagtgagctgcttcagacagagaaggcgtatgtctcccgacttcacctc
ctggatcaggtgttctgcgctcggctgatggaggaagcgcgaactcggaactctttccct
gtggaagtggtgatgggaatcttctccaacatctgttccatctactgcttccaccagcag
tttctgctcccggagctggagaagcgtatgcaggagtgggacaccaacccccgaattgga
gatattctgcagaagctagcgccattcctaaagatgtacggggaatacgtaaagaacttt
gaccgcgccatggagctggtcagcacctggatggagcgctccgcccagtttgccaccatt
gtccatgacattcagaaggaggaggtttgcggaagcctgtcgctgcagcaccacatgttg
gagccagttcagcggatccctcgctacgagctgctgctgaaggactacctgaagaaattg
ccagacgattcaccagataacaaagatgctgaaaaatctttagaactgattgcgacggcg
gcagaacactccaatgcagccattaggaaaatggagagaatgcacaagttactgaaagtg
tacgaactcctcgggggagaagaggacatcatgagtcccacaaatgagcttatcaaagaa
gggcacattctcaaactttcagccaagaacgggacaactcaggacagatacctcatcctg
gtacttctgcaccctttcattggaaaccctctaaaagagacgagtagtttgaacatgtct
cgaacgttcctggtgtctgggaaacagaggtcattggaacttcaggccagaactgaagaa
gagaaaaaggattggattcaggcaatccaaatgacgatgcaggcgcatgaacaaacgtta
gagaccttcaagctcctaaacacttcctgcagagaggaggaggagaccccgcccaactct
cccagcacagatctgggaaagagagcaccgactccaattcgggagaaggaggtcaccatg
tgtatgaggtgtcaggaacccttcaactccatcaccaagagaagacatcattgcaaagcc
tgcggacatgtggtgtgtggaaagtgctcggatttccgggcccgcctcgtctatgataac
aaccgcacaaaccgtgtttgcgtggactgctacactgcgctgcatgggcctcccagctct
ccagggtaccagcagcacaccccgcagaggagaaagtccattttagagaagcaggcctct
gtggtggcggaaaacagcgtgatctgcagctacctgtactatctggagaaaggagggaag
agctggcagaaggcctggcttgtaatcccggaaaacgagcccctggtcctgtacatatat
ggagctccccaggacgtgaaggctcagcgcagcgtcccgctgatcggtttcgaggtcggc
ctccctgagcccgccgacaaggtggagaggcggcacgctttccagatccgtcagagtcac
ctgaccctctacttcagcgctgagcgggaggagctacagcggcggtggatggacgtgctg
ttgcgggctggccgcggcgaggaccacggggctgcggctgccgccgctgctccccagtcc
atatcggaggcagacgaggagctggaaggggtggaggtgtttgaaaaagcggtcagtgaa
aacacgtaa
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