KEGG   Latimeria chalumnae (coelacanth): 102351360
Entry
102351360         CDS       T02913                                 
Symbol
CLSTN1
Name
(RefSeq) calsyntenin 1
  KO
K22659  calsyntenin 1
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lcm04515]
    102351360 (CLSTN1)
Cell adhesion molecules [BR:lcm04515]
 Cadherins
  Cadherin related
   102351360 (CLSTN1)
SSDB
Motif
Pfam: CLSTN_C Cadherin CDC45 SID-1_RNA_chan Laminin_G_2 PRIMA1 V_ATPase_I PFF1_TM EphA2_TM Neur_chan_memb Cadherin_C_2 Laminin_G_3 TMEM132_C Serinc Zip
Other DBs
NCBI-GeneID: 102351360
NCBI-ProteinID: XP_014341469
Ensembl: ENSLACG00000008180
LinkDB
Position
Un
AA seq 909 aa
MNLGRYKASCVTWLILSITCGIWAGKVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDK
DAPIRYAESFEVTFTKEGEICGFRIHGQNIPFEAVVVDKTTGEGVIHSKDKLDCELQKEY
TFTIQAYDCGEGPDGANMKKSHKGTVHVQVNDVNEFSPVFKEKSYKATVIEGKKYDNILK
VEAVDADCSPQFSQICSYEIVTPDIPFTIDKDGYIKNTEKLNYSKERQYKLTVTAYDCGK
KRATEDVLVKIGIKPTCRPGWQGWSKRMEYEPGTGSLDLFPNMHLETCEEPITSIQATIE
LETSHIGKGCDRDTYSEKSLHKLCGGKSRSGSSNCSESQKVEKDMNRHHYSFYVHNCRLI
FLFRQDPSEPENYKPAEFHWKLDQVCDKEWHHYVLNIESPIVALYVDGVSFDPFLVTEDY
PLHPSKIETQLVVGACWQEYTGHENDNETVTEAYAGGELRMSQFFRGNLAGLMIRSGKLE
SKKVIDCLYTCKEGLDLQVPDGVGKGIKIHFSPSPSVLTVEGDDIENFDKAMQHISYLNS
RQFPTPGIRRLKITTTVKCFNEETCITLPDVEGYVMVLQPEEPKISLSGIDHFARAAAEF
ESMEGVTLFPELRIVSTITREVEPEGEDDPTVQESMVSEEIMHNLDMCEITVLGDELNTE
QESLEVDLTQLQQKGIEMSSSNVGMIITGVNTMANYEQVLHLIRYRSWHSAALFDRKFKL
VCSELNGRYISNEFKVEVNVIHTANPVEHPNHLAAQPQFVRPVHHPSVDLSGHNLANPHS
SSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQENGKENEMDWDDSALTITV
NPMETYEDQHSSEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQEEDQQNVNRQQQL
EWDDSTLSY
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgaatttaggaagatacaaagcttcgtgtgtaacttggttaattctgagtataacctgt
gggatatgggcaggaaaagttaacaagcataaaccatggatagaaactacatatcatggt
atagtaacagaaaacgacaatacagtactattggatccacctttaatagcactggataaa
gatgcaccaatacgttacgcagagagttttgaggtgacattcaccaaagaaggtgagatt
tgtggatttaggattcatggacagaatattccctttgaagctgtggtggtagataaaacc
actggtgagggagtcatacactctaaagacaaacttgactgtgaactgcaaaaggaatac
acatttaccattcaggcttatgactgtggtgaaggaccagatggggccaatatgaaaaaa
tcccacaaggggactgtacatgtccaagtgaatgatgtgaatgagttttctcctgttttt
aaagaaaagtcctacaaagccactgtgattgaaggaaagaaatatgataacatcttaaaa
gtggaagcagttgatgctgattgttcgcctcagtttagccagatctgcagttatgaaatt
gtaactccagatattcctttcactattgataaagatggttatattaaaaacactgaaaag
cttaattatagcaaggagcgccagtataagcttacagtgactgcttatgattgtggtaag
aaaagagctactgaggatgttctggtcaagattggtatcaaacccacatgcagacctggc
tggcaaggttggagtaaaagaatggaatatgagcctggcacaggcagtttggatttattc
cccaatatgcatttagagacctgtgaagaacccattacatctatacaagcaactattgag
ctagaaaccagtcacattggaaaaggatgcgatagggatacatactcagaaaaatcactc
cataagctctgtggtggaaaaagcagatctggttctagcaattgtagcgagtctcaaaag
gttgaaaaggacatgaatcgacaccattattccttctacgtgcacaactgccgtttgatt
tttcttttccggcaagatccctctgaacctgagaattacaagcctgcagaattccactgg
aaattagatcaggtgtgtgataaagaatggcatcattacgtactgaatattgagtctcca
attgtagccttatatgtagatggagtttcatttgatcccttcctggtcacagaggattac
ccacttcatccttcaaagatagaaactcagctggtggttggagcttgctggcaagaatat
acaggacatgaaaatgacaatgaaactgtgactgaggcctatgcaggcggtgaacttcgt
atgtcccagttcttccgtggcaatctagctggtttgatgattcgttctggcaaattggaa
agcaagaaagtgattgattgcctgtatacttgcaaggagggactggatctacaagtccca
gatggagttggtaaaggcattaagattcacttcagtcctagcccttctgtgttgacagtg
gaaggggatgacattgaaaactttgacaaagctatgcaacacatttcttacctgaattct
cgtcagttcccaactcctgggatcaggaggctcaagattaccactactgtcaagtgtttc
aatgaagaaacctgtattactctccctgacgtagaaggatatgtaatggttttgcagcca
gaagaaccaaaaatcagtttaagtggtattgaccactttgcacgtgctgctgctgaattt
gaaagtatggaaggtgttacactctttcctgagctgcgaattgttagcacaattacccgt
gaagtagagcctgaaggtgaagatgatcccacagttcaagaatccatggtatcggaggag
attatgcataatctagatatgtgtgagatcacagtgctaggagatgagctgaacacagaa
caagagagtcttgaggtggacctgactcagttgcaacaaaaaggaattgagatgagtagc
tctaacgttggcatgattattacaggtgttaatactatggctaattatgaacaagtactg
cacttgattcgctatagaagctggcattctgctgctttgtttgaccgaaaattcaagtta
gtgtgttctgagctcaatggacgctacatcagcaatgagtttaaagttgaggtgaatgtg
attcatactgcaaaccctgtggagcatcccaatcatttagctgcacagcctcagtttgtc
cgtccagtgcatcatccatctgtggatttgtctggccacaatctggctaatcctcactcc
tcttcagttgttcccagcaccgcaacagttgtgattgtggtttgcgtaagttttctggtg
ttcatgataatccttggggtcttccgaatccgtgctgcacatcagagaacaatgcgggat
caagagaatggaaaagagaatgaaatggactgggacgactctgctttgaccattacagtg
aatccaatggagacttatgaggaccagcatagcagtgaggaggaggaggaggaagaggag
gaggaaagtgaggatggggaagaggaagatgacatcaccagtgctgagtcggagagtagt
gaagaggaggagggagaacaagaggaggaccaacagaatgtcaacaggcagcagcagctt
gaatgggatgactccaccctcagctattga

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