KEGG   Latimeria chalumnae (coelacanth): 102351379
Entry
102351379         CDS       T02913                                 
Symbol
DCP1B
Name
(RefSeq) decapping mRNA 1B
  KO
K12611  mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102351379 (DCP1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102351379 (DCP1B)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102351379 (DCP1B)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     102351379 (DCP1B)
SSDB
Motif
Pfam: DCP1 mRNA_decap_C WH1
Other DBs
NCBI-GeneID: 102351379
NCBI-ProteinID: XP_005989498
Ensembl: ENSLACG00000017357
LinkDB
Position
Un
AA seq 611 aa
MAAGSAVGRGNMADYPVVPCTVKGLDISLAALQRHDPYINTIVDVASQVALYTFSHKANE
WEKTDVEGTLFVYTRSASPRHGFTIMNRLSMENRTEPITKDLDFLLQDPFLLYRNARLAI
YGIWFYDKEECQRIADVMKDLTRQEQVKAEQGAAEGVSPQSVKPREDKAVDILKMLYKAK
DEYNKGKPSAEPKQISNSSAIYNNPNLIKPIPVKPSESQYQPAAQQPTKSLSQEPQHLSL
AALFGSHEQTQGTMQQQQQPPPRKGKTSGRHGVARSLSYEEPSRLGATEKPQALEKQLCP
AIQKLIAPGAELQPVPELPERRVCVNGHAVSTSDSLTGLFQPVAARNPDPVGAQKLLHQL
QGPVAPAMKTEPGAGGPADILLRGMHPPLSAPVRGSMQMKPTYFNTALPSQPVKSQCFSL
VAPRVDVPAPTLVSRDISPHELLQKLQLVQEEQQCHGNSRPVLAAKFPSKAPVVSQGLPA
LKPMDPWMDKAPGAEKPNPLFQVFSPQRIAATIAPTQLMSPMVFAQCAAGKTNAAESGWM
PATNTDPDLGATSLLLPSQTPEPSTSHPNTLTKGQLQDTLVYLIKNDANFLNIIYEAYLS
GVPKEGVKKKV
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggctgcaggatctgcagtgggacgtggaaacatggcggattacccagtggtgccctgt
actgtgaaaggattggacatcagtctggcagcgttgcagaggcacgacccctatatcaac
accatcgtggacgtggccagccaagtggctctctacactttcagccacaaagccaacgaa
tgggagaagactgatgtggagggaaccttgtttgtttataccaggtcagcctctcccagg
catggctttactatcatgaaccgactcagcatggagaatcgaactgaacccatcaccaag
gatctggacttcctccttcaggatccattcctcctttacagaaatgcaagattggccatc
tatggaatctggttctatgataaggaggaatgccaaagaattgccgacgtcatgaaagac
ttgacgcggcaagagcaggtgaaggcggagcagggggcggcagagggcgtctccccccag
agtgtgaagcccagggaggacaaggcagtggatatcttgaagatgctttataaggcgaaa
gacgaatacaataagggtaagccgagtgcagagccgaagcagatctcaaactccagcgca
atctacaataatcccaacctaatcaagccaatcccagtcaaacccagtgagtcccagtac
caaccagcagcacagcaacccaccaagagcctcagtcaggaacctcagcacttgtcactc
gctgccctttttggttcacatgagcagacgcaagggacgatgcagcagcagcagcaaccg
ccgccacggaagggcaagacgtcgggaagacatggcgtggcccgctccttgtcctacgag
gaacccagcaggctgggagccacggagaagccccaggcactggagaagcagctttgcccc
gccatccagaaactcattgccccgggggcagagctccagcctgtcccggagctgcccgag
aggcgggtgtgcgtgaacggccacgcggtctcgaccagtgactccctaacgggactcttc
caaccagtggccgcccggaacccagaccccgtgggggcccagaaacttctgcaccagctg
cagggcccagtggcaccagccatgaaaacagaaccaggggctggcggtccagcggacatc
ctcttgagagggatgcaccctcctctctcggcacccgtgaggggctccatgcagatgaag
cccacctactttaacacagccctgccctcccagcctgtcaagtcgcagtgtttcagcctg
gtggcccccagggttgacgtgccggccccaacccttgtgtcccgggacatctcaccccac
gaattgctgcagaaacttcagctggtgcaggaggagcagcagtgccacgggaacagccgc
cccgtgctggccgccaagtttccctccaaagcgccagtggtcagccagggcttgccagcc
cttaaacccatggacccctggatggacaaagcccctggggccgaaaaacccaaccccctt
ttccaggtattttctccccagcgcatcgccgccaccattgcgcctacgcagctcatgtcg
cccatggtttttgcacagtgcgccgctgggaagacaaacgcagcagagagcggctggatg
cctgcaacgaacacagacccggacctgggcgcaaccagcctcctcctgccctcgcaaact
ccggagccgtctacctctcaccccaacacgcttacaaaggggcaactgcaagacacactt
gtgtaccttatcaagaacgatgcaaactttttaaacatcatctacgaagcctatctctcc
ggtgtgcccaaagagggagtgaagaagaaggtgtaa

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