KEGG   Latimeria chalumnae (coelacanth): 102351564
Entry
102351564         CDS       T02913                                 
Name
(RefSeq) uncharacterized LOC102351564
  KO
K11098  small nuclear ribonucleoprotein F
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102351564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102351564
   03041 Spliceosome [BR:lcm03041]
    102351564
   03032 DNA replication proteins [BR:lcm03032]
    102351564
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     102351564
Spliceosome [BR:lcm03041]
 Complex A
  U1 snRNP components
   Sm proteins
    102351564
  U2 snRNP components
    102351564
 Complex B
  U1 snRNP components
    102351564
  U4/U6.U5 tri-snRNP components
    102351564
 Complex C
  U2 snRNP components
    102351564
DNA replication proteins [BR:lcm03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     102351564
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 102351564
NCBI-ProteinID: XP_006013478
LinkDB
Position
Un
AA seq 205 aa
MAAVLAGPVLEGSLHCDAVAPLARALFLFFFFFFSSLFEFLSLSLFPHTHPRCRVAPPTL
SLLAANQSALPVRGVQRAKVTSLFSSSLAQSRVSCGRREKGGKKPQEKGASFLFVCKTDM
SLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGE
VLIRCNNVLYIRGVEEEEEDGEMRE
NT seq 618 nt   +upstreamnt  +downstreamnt
atggccgctgttctcgcgggcccggttctcgaaggcagcctccattgtgacgccgttgcc
cccctcgcgcgcgctctcttcctctttttttttttttttttctcctctttgtttgaattt
ctctctctctctctcttcccccacacacacccacgttgccgtgtggccccgcccaccctc
tctctcctggcggccaatcagagcgcgcttcctgtgcgcggggtgcagagggcaaaggtg
acgagcctcttttcctcctcgctcgctcagtcgcgtgttagttgcggacggagagagaaa
gggggaaaaaaacctcaagaaaaaggcgcctcgtttctgttcgtctgtaaaaccgatatg
agtttacctttgaatccgaaaccctttcttaacgggttgactgggaagccagtgatggtc
aagttgaaatggggtatggaatacaaaggttacttggtgtctgtggatggatacatgaac
atgcaacttgcaaacacagaagaatacatcgacggagcattgtcaggccatttaggagaa
gtccttataaggtgtaacaatgtgctttatatcagaggtgttgaagaggaagaagaagat
ggagaaatgagagaatag

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