Latimeria chalumnae (coelacanth): 102351823 Help Entry 102351823         CDS       T02913                                  Symbol PRPF19 Name (RefSeq) pre-mRNA processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm03040   Spliceosome lcm04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:lcm00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102351823 (PRPF19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     102351823 (PRPF19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:lcm03041]     102351823 (PRPF19)    04121 Ubiquitin system [BR:lcm04121]     102351823 (PRPF19)    03400 DNA repair and recombination proteins [BR:lcm03400]     102351823 (PRPF19) Enzymes [BR:lcm01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      102351823 (PRPF19) Spliceosome [BR:lcm03041]  Complex B   Other components    Prp19 complex     102351823 (PRPF19)  Complex C    Prp19-CDC5 complex     102351823 (PRPF19) Ubiquitin system [BR:lcm04121]  Ubiquitin ligases (E3)   U-box type E3    102351823 (PRPF19) DNA repair and recombination proteins [BR:lcm03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     102351823 (PRPF19) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_HPS5 WD40_RFWD3 PROPPIN U-box Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_SPT8 zf-Nse Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Cytochrom_D1 RMC1_N ATG16 DUF1830 Motif Other DBs NCBI-GeneID:  102351823 NCBI-ProteinID:  XP_006011709 Ensembl:  ENSLACG00000003434 UniProt:  H3A2I6 LinkDB All DBs Position Un AA seq 504 aa AA seqDB search MSLVCSISNEVPEHPCVSPVSNHVFERRLIEKYIAENGTDPINGQPLSEELLIDIKVAHP IRPKPPSSTSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLVVPQALPAAQPISAGAGEPVEMGELVGMTPEIIQKLQDKA TVLTTERKKRGKTVPEELVKTEDLGKYRQIASHVGLHSASIPGILALDLCPSDTSKVLTG GADKNVVVFDKKSEQILATLKGHNKKVTSVVFHPSQDLVFSASPDTTIRIWSVPSTSCVQ VIRAHEGAVTGLSLHATGDYLLSSSEDQFWAFSDVHTGRILTKVTDEVSGCALTCAQFHP DGLIFGTGTIDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD LRKLKNFKTIQLDDNFEVKSLMFDQSGTYLALAGTDMRVFICKQWTEILHFTEHSGLTTG VAFGQHAHFLASSGMDRSLKFYSF NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atgtctctggtttgttcaatttccaatgaggtaccagaacacccctgtgtgtctcctgtc tccaaccatgtctttgagcgaagactgattgagaaatatattgctgagaatggaacagat cctattaacggacagcccctctccgaagaattacttatcgacatcaaagttgctcatcct atcaggccaaagcccccttcatctaccagcatccctgctatactgaaatctctgcaggat gagtgggatgcggtgatgttgcatagttttacactccgtcagcagctgcagacgacacgt caagagctctcccatgcactctatcagcatgatgctgcttgccgtgtcatcgcccgtcta accaaggaggtgacagcagccagagaagctctggctacattgaagccccaggctggactg gttgtcccacaagctctccctgctgcccagcctatatcagcgggtgctggtgagccagtg gagatgggagaattggttggaatgacccctgaaatcattcagaagctccaagacaaggca actgttctgaccacagaaaggaagaagagaggcaagactgtgccagaagaactggtcaaa acagaagatctcggcaaataccgacagatcgcttcccacgtgggcttacacagcgccagt atcccaggaatccttgctcttgacctttgcccttcagataccagcaaggtgttgacaggt ggagcagataaaaatgtggtcgtctttgataagaaatcggaacagatcctggcaaccctg aaaggacacaacaagaaggtcacaagcgtggtcttccatccctcccaggatctggtgttt tcggcctcacctgacaccacaatccggatctggtctgttcccagcacctcctgcgtccag gttattcgtgctcatgagggtgccgtgacgggactgagtcttcacgccacgggagactat ttgctgagttcatcggaagatcagttttgggctttctcagatgttcatactggccgcatc ctgaccaaagtgacagatgaggtctccgggtgtgctctgacctgtgctcagttccaccct gatgggctgatttttggaactggaaccattgactcgcagattaagatttgggatttgaag gaaagaacaaatgtggctaatttccctggccattccggccccatcaccagtattgccttc tccgagaatggatattacctcgccactgccgctgatgattcttctgttaaactctgggat ctgcgcaaactgaagaatttcaaaaccattcaactggacgataactttgaggttaaatct ttgatgtttgatcagagtggaacttacctggctctcgctggcacagatatgagggtcttc atttgcaagcagtggacagaaattttacattttacagagcacagtggactaacgactgga gtggcttttggacaacatgcccatttcctggcctcctctgggatggatcgtagtctcaag ttttacagcttctga

DBGET integrated database retrieval system