Latimeria chalumnae (coelacanth): 102351947
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Entry
102351947 CDS
T02913
Symbol
LINGO2
Name
(RefSeq) leucine rich repeat and Ig domain containing 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102351947 (LINGO2)
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
102351947 (LINGO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
V-set
LRRNT
Ig_6
LRR_6
Ig_C17orf99
LRR_9
Motif
Other DBs
NCBI-GeneID:
102351947
NCBI-ProteinID:
XP_005996771
Ensembl:
ENSLACG00000016310
LinkDB
All DBs
Position
Un
AA seq
607 aa
AA seq
DB search
MLHTAISCWQPFLGLALVIVFVGSAFGCPARCDCSAQNKSVICYRRRLVAIPEGIPIETK
ILDLSKNKLKAVAPDDFASYPLLEELDISDNIISNVEPGSFNNLYNLRSLRLRSNRLKLV
PLGVFTGLSNLTKLDISENRIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLISLE
QLTLEKCNLTAVPTEALSHLHNLYSLRLRHLSINALHAYTFKKLFRLKHLEIDYWPLLDL
LPANSLHGLNLTSLSITNTNLSTVPYTALKHLVYLTHLNLSFNPISTIEAGMFVDLIRLQ
ELHMVGAHLLTVEPYAFQGLRFLRILNVSHNLLDTLEERVFQSPRNLEMLCIDNNPLACD
CRLLWILQRQHALHFGEQQPTCAAPEGIRGKQFKEFHDTVLSYYFTCRKPRIRDKKLQHH
IVSEGQTVQLICHADGDPLPVIQWLAPGRRVLTVKSSGRATVLGDGTLEIRFAQVQDNGT
YICMASNPAGNDTFTASLTVKGFASDNIIFGNRTSMYTSNSNDTSSNGTNTPMTFSLDLK
TILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKTSIDLEYVPRKSNGSTVEGEPVGPR
RFNMKMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacacagcaatatcatgctggcagccattcctgggattggccttagtgattgtc
tttgtgggttctgcatttggctgtccagcacgctgcgactgctctgcccagaacaaatct
gtcatctgttatcgcagacgtctggtggcgatacctgagggcatccccatcgagaccaaa
atcttagacctcagcaagaacaaactgaaagctgttgccccagatgattttgcctcctac
cctctgctggaggaattagacattagtgacaacataatctcaaatgtggaacctggctct
tttaataacctgtacaatttacgttcacttcggctgagaagcaatcgtctaaagctggtc
cctcttggagtctttacaggattatccaatttgactaaacttgatataagtgaaaataga
attgttattttgttggattacatgttccaggatttacacaatctaaagtcccttgaggtg
ggagacaatgatttggtttatatctctcaccgggccttcagtggactaattagcttggag
cagcttaccttggaaaaatgcaacctgacagcagtcccaacagaagccctgtcacacctc
cataatctctatagcttgcgcctaagacatctcagtattaatgcgctgcatgcatacacc
tttaagaagctgtttcgtttgaaacacttggagatcgactactggcctctattggatttg
ctccctgctaacagcttgcatggcctcaacctcacctctctctctattacgaacactaac
ctgtccacagtaccttatactgctcttaagcacctggtttacctgacccacttgaaccta
tccttcaaccccatcagcaccattgaggcaggcatgtttgtggacctaattcgcttacag
gagctacatatggttggtgcccatctactgacagtggagccatatgccttccaaggattg
aggtttctgcgtattctcaatgtttcccacaacttgctggatacattggaagagagagtg
tttcagtctccaaggaaccttgagatgctctgcattgacaacaatcctctggcttgtgat
tgccgtcttctctggattttacaaagacagcatgctttacattttggagaacagcagcct
acatgtgctgcaccagagggtatccggggcaagcagttcaaggaatttcatgacactgtt
ctgtcctactactttacatgcagaaagccaagaatacgagacaaaaagctacaacatcac
attgttagtgaagggcagacagtgcaattaatttgtcatgctgatggtgaccccttacca
gttatccagtggttggcaccaggtagaagagtgctcactgtaaaatcaagtggaagagcc
acagtgttgggagatggtacactggaaatcaggtttgcccaggttcaagacaacgggacc
tacatatgcatggccagtaaccctgcaggaaatgataccttcactgcatcactaacagtt
aaaggatttgcttcagacaatatcatttttggcaataggacctcaatgtacacgtcaaat
tctaatgacaccagttccaatggaaccaatacacccatgacattttctctggatcttaag
accatactagtttccacagccatggggtgttttacattcctaggggtggtcttattttgc
ttcctgcttctgtttgtgtggagccgagggaaaggaaagcacaaaaccagcattgacctt
gagtatgtgccccggaaatcaaatggctcaaccgttgagggggagcctgtgggtccacgg
aggttcaacatgaaaatgatctaa
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